RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 DZANK1Q9NVP4 752 aa21.02■□□□□ 0.96
CDKN3-209ENST00000556102 DNAJB4Q9UDY4 337 aa21.02■□□□□ 0.96
CDKN3-209ENST00000556102 CDH22Q9UJ99 828 aa21.02■□□□□ 0.96
CDKN3-209ENST00000556102 CNTNAP2Q9UHC6 1331 aa21.02■□□□□ 0.95
CDKN3-209ENST00000556102 KMT2EQ8IZD2 1858 aa21.01■□□□□ 0.95
CDKN3-209ENST00000556102 FAM205CA6NFA0 338 aa21.01■□□□□ 0.95
CDKN3-209ENST00000556102 SP100P23497 879 aaPredicted RBP21.01■□□□□ 0.95
CDKN3-209ENST00000556102 HOXA11P31270 313 aaPredicted RBP21.01■□□□□ 0.95
CDKN3-209ENST00000556102 SLC11A1P49279 550 aa21.01■□□□□ 0.95
CDKN3-209ENST00000556102 NR5A1Q13285 461 aa21.01■□□□□ 0.95
CDKN3-209ENST00000556102 FERMT3Q86UX7 667 aa21.01■□□□□ 0.95
CDKN3-209ENST00000556102 FBXL6Q8N531 539 aa21.01■□□□□ 0.95
CDKN3-209ENST00000556102 POMKQ9H5K3 350 aa21.01■□□□□ 0.95
CDKN3-209ENST00000556102 RSAD1Q9HA92 442 aa21.01■□□□□ 0.95
CDKN3-209ENST00000556102 B4GALT3O60512 393 aa21■□□□□ 0.95
CDKN3-209ENST00000556102 FDPSP14324 419 aaKnown RBP21■□□□□ 0.95
CDKN3-209ENST00000556102 MTHFRP42898 656 aa21■□□□□ 0.95
CDKN3-209ENST00000556102 CYP4A11Q02928 519 aa21■□□□□ 0.95
CDKN3-209ENST00000556102 CTTNQ14247 550 aaKnown RBP21■□□□□ 0.95
CDKN3-209ENST00000556102 UBXN11Q5T124 520 aa21■□□□□ 0.95
CDKN3-209ENST00000556102 ZNF280BQ86YH2 543 aa21■□□□□ 0.95
CDKN3-209ENST00000556102 RNF149Q8NC42 400 aa21■□□□□ 0.95
CDKN3-209ENST00000556102 TNFRSF25Q93038 417 aa21■□□□□ 0.95
CDKN3-209ENST00000556102 ASIC4Q96FT7 647 aa21■□□□□ 0.95
CDKN3-209ENST00000556102 RIPOR3Q96MK2 946 aa21■□□□□ 0.95
CDKN3-209ENST00000556102 MTRQ99707 1265 aa21■□□□□ 0.95
CDKN3-209ENST00000556102 TSHZ2Q9NRE2 1034 aa21■□□□□ 0.95
CDKN3-209ENST00000556102 KANSL3Q9P2N6 904 aa21■□□□□ 0.95
CDKN3-209ENST00000556102 STK39Q9UEW8 545 aa21■□□□□ 0.95
CDKN3-209ENST00000556102 ZBTB39O15060 712 aa20.99■□□□□ 0.95
CDKN3-209ENST00000556102 SLITRK3O94933 977 aa20.99■□□□□ 0.95
CDKN3-209ENST00000556102 NEFLP07196 543 aa20.99■□□□□ 0.95
CDKN3-209ENST00000556102 MRE11P49959 708 aa20.99■□□□□ 0.95
CDKN3-209ENST00000556102 RARS2Q5T160 578 aaKnown RBP20.99■□□□□ 0.95
CDKN3-209ENST00000556102 ZBTB33Q86T24 672 aa20.99■□□□□ 0.95
CDKN3-209ENST00000556102 TPH2Q8IWU9 490 aa20.99■□□□□ 0.95
CDKN3-209ENST00000556102 SLC22A17Q8WUG5 538 aa20.99■□□□□ 0.95
CDKN3-209ENST00000556102 TMEM175Q9BSA9 504 aa20.99■□□□□ 0.95
CDKN3-209ENST00000556102 VN1R3Q9BXE9 311 aa20.99■□□□□ 0.95
CDKN3-209ENST00000556102 C2CD4DB7Z1M9 353 aa20.98■□□□□ 0.95
CDKN3-209ENST00000556102 DDHD2O94830 711 aa20.98■□□□□ 0.95
CDKN3-209ENST00000556102 ERLIN2O94905 339 aa20.98■□□□□ 0.95
CDKN3-209ENST00000556102 EPCAMP16422 314 aa20.98■□□□□ 0.95
CDKN3-209ENST00000556102 NCLP19338 710 aaKnown RBP20.98■□□□□ 0.95
CDKN3-209ENST00000556102 MXD4Q14582 209 aaPredicted RBP20.98■□□□□ 0.95
CDKN3-209ENST00000556102 PCBP1Q15365 356 aaKnown RBP eCLIP20.98■□□□□ 0.95
CDKN3-209ENST00000556102 PTPN14Q15678 1187 aa20.98■□□□□ 0.95
CDKN3-209ENST00000556102 KIAA1841Q6NSI8 718 aa20.98■□□□□ 0.95
CDKN3-209ENST00000556102 PPFIBP1Q86W92 1011 aa20.98■□□□□ 0.95
CDKN3-209ENST00000556102 C12orf76Q8N812 135 aaPredicted RBP20.98■□□□□ 0.95
CDKN3-209ENST00000556102 NECAB1Q8N987 351 aa20.98■□□□□ 0.95
CDKN3-209ENST00000556102 CNNM3Q8NE01 707 aa20.98■□□□□ 0.95
CDKN3-209ENST00000556102 PRSS33Q8NF86 280 aa20.98■□□□□ 0.95
CDKN3-209ENST00000556102 GTF3C6Q969F1 213 aa20.98■□□□□ 0.95
CDKN3-209ENST00000556102 FAM193BQ96PV7 902 aaPredicted RBP20.98■□□□□ 0.95
CDKN3-209ENST00000556102 PRRX2Q99811 253 aa20.98■□□□□ 0.95
CDKN3-209ENST00000556102 EIF2AK1Q9BQI3 630 aaKnown RBP20.98■□□□□ 0.95
CDKN3-209ENST00000556102 XPNPEP1Q9NQW7 623 aa20.98■□□□□ 0.95
CDKN3-209ENST00000556102 DENND4AQ7Z401 1863 aa20.97■□□□□ 0.95
CDKN3-209ENST00000556102 LYPLA2O95372 231 aa20.97■□□□□ 0.95
CDKN3-209ENST00000556102 ALDH2P05091 517 aa20.97■□□□□ 0.95
CDKN3-209ENST00000556102 AXLP30530 894 aa20.97■□□□□ 0.95
CDKN3-209ENST00000556102 AFF1P51825 1210 aaKnown RBP20.97■□□□□ 0.95
CDKN3-209ENST00000556102 PTENP60484 403 aa20.97■□□□□ 0.95
CDKN3-209ENST00000556102 CALCRLQ16602 461 aa20.97■□□□□ 0.95
CDKN3-209ENST00000556102 ME3Q16798 604 aa20.97■□□□□ 0.95
CDKN3-209ENST00000556102 CCDC51Q96ER9 411 aa20.97■□□□□ 0.95
CDKN3-209ENST00000556102 UBN1Q9NPG3 1134 aa20.97■□□□□ 0.95
CDKN3-209ENST00000556102 PCDHA12Q9UN75 941 aa20.97■□□□□ 0.95
CDKN3-209ENST00000556102 FAN1Q9Y2M0 1017 aa20.97■□□□□ 0.95
CDKN3-209ENST00000556102 TDRD15B5MCY1 1934 aaKnown RBP20.96■□□□□ 0.95
CDKN3-209ENST00000556102 LARGE1O95461 756 aa20.96■□□□□ 0.95
CDKN3-209ENST00000556102 WEE2P0C1S8 567 aa20.96■□□□□ 0.95
CDKN3-209ENST00000556102 PTPN5P54829 565 aa20.96■□□□□ 0.95
CDKN3-209ENST00000556102 TFDP1Q14186 410 aa20.96■□□□□ 0.95
CDKN3-209ENST00000556102 ATAT1Q5SQI0 421 aa20.96■□□□□ 0.95
CDKN3-209ENST00000556102 IER5LQ5T953 404 aa20.96■□□□□ 0.95
CDKN3-209ENST00000556102 IFNLR1Q8IU57 520 aaPredicted RBP20.96■□□□□ 0.95
CDKN3-209ENST00000556102 KREMEN2Q8NCW0 462 aa20.96■□□□□ 0.95
CDKN3-209ENST00000556102 SMG8Q8ND04 991 aaKnown RBP20.96■□□□□ 0.95
CDKN3-209ENST00000556102 NSUN7Q8NE18 718 aaKnown RBP20.96■□□□□ 0.95
CDKN3-209ENST00000556102 HSD17B14Q9BPX1 270 aa20.96■□□□□ 0.95
CDKN3-209ENST00000556102 EMILIN2Q9BXX0 1053 aa20.96■□□□□ 0.95
CDKN3-209ENST00000556102 ANKEF1Q9NU02 776 aa20.96■□□□□ 0.95
CDKN3-209ENST00000556102 SORCS3Q9UPU3 1222 aa20.96■□□□□ 0.95
CDKN3-209ENST00000556102 IPPQ9Y573 584 aa20.96■□□□□ 0.95
CDKN3-209ENST00000556102 NRP1O14786 923 aa20.95■□□□□ 0.94
CDKN3-209ENST00000556102 TSPAN1O60635 241 aa20.95■□□□□ 0.94
CDKN3-209ENST00000556102 DGAT1O75907 488 aa20.95■□□□□ 0.94
CDKN3-209ENST00000556102 POMCP01189 267 aa20.95■□□□□ 0.94
CDKN3-209ENST00000556102 ITGA4P13612 1032 aa20.95■□□□□ 0.94
CDKN3-209ENST00000556102 POU5F1BQ06416 359 aa20.95■□□□□ 0.94
CDKN3-209ENST00000556102 NCBP1Q09161 790 aaKnown RBP20.95■□□□□ 0.94
CDKN3-209ENST00000556102 NOTUMQ6P988 496 aa20.95■□□□□ 0.94
CDKN3-209ENST00000556102 CABP7Q86V35 215 aa20.95■□□□□ 0.94
CDKN3-209ENST00000556102 TDRD5Q8NAT2 981 aaKnown RBP20.95■□□□□ 0.94
CDKN3-209ENST00000556102 KLHL5Q96PQ7 755 aa20.95■□□□□ 0.94
CDKN3-209ENST00000556102 EIF2AQ9BY44 585 aaKnown RBP20.95■□□□□ 0.94
CDKN3-209ENST00000556102 TTC12Q9H892 705 aaPredicted RBP20.95■□□□□ 0.94
CDKN3-209ENST00000556102 BTBD18B2RXH4 712 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms