RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 DDX25Q9UHL0 483 aaKnown RBP8.36□□□□□ -1.07
CHD8-209ENST00000555935 PCDHA12Q9UN75 941 aa8.36□□□□□ -1.07
CHD8-209ENST00000555935 IGSF9BQ9UPX0 1349 aa8.36□□□□□ -1.07
CHD8-209ENST00000555935 E9PMD0 336 aa8.35□□□□□ -1.07
CHD8-209ENST00000555935 DCTN3O75935 186 aa8.35□□□□□ -1.07
CHD8-209ENST00000555935 GSTA2P09210 222 aa8.35□□□□□ -1.07
CHD8-209ENST00000555935 PLCG2P16885 1265 aa8.35□□□□□ -1.07
CHD8-209ENST00000555935 ABCB4P21439 1286 aa8.35□□□□□ -1.07
CHD8-209ENST00000555935 COILP38432 576 aaPredicted RBP8.35□□□□□ -1.07
CHD8-209ENST00000555935 BMT2Q1RMZ1 405 aa8.35□□□□□ -1.07
CHD8-209ENST00000555935 TCERG1LQ5VWI1 586 aa8.35□□□□□ -1.07
CHD8-209ENST00000555935 CGB2Q6NT52 195 aa8.35□□□□□ -1.07
CHD8-209ENST00000555935 TTC27Q6P3X3 843 aa8.35□□□□□ -1.07
CHD8-209ENST00000555935 VSIG1Q86XK7 387 aa8.35□□□□□ -1.07
CHD8-209ENST00000555935 DZIP1Q86YF9 867 aaKnown RBP8.35□□□□□ -1.07
CHD8-209ENST00000555935 CCDC105Q8IYK2 499 aa8.35□□□□□ -1.07
CHD8-209ENST00000555935 C12orf50Q8NA57 414 aaPredicted RBP8.35□□□□□ -1.07
CHD8-209ENST00000555935 ANKLE1Q8NAG6 615 aa8.35□□□□□ -1.07
CHD8-209ENST00000555935 C7orf43Q8WVR3 580 aa8.35□□□□□ -1.07
CHD8-209ENST00000555935 DNAJC9Q8WXX5 260 aa8.35□□□□□ -1.07
CHD8-209ENST00000555935 TRAPPC9Q96Q05 1148 aa8.35□□□□□ -1.07
CHD8-209ENST00000555935 NUDCD1Q96RS6 583 aa8.35□□□□□ -1.07
CHD8-209ENST00000555935 PITPNM3Q9BZ71 974 aa8.35□□□□□ -1.07
CHD8-209ENST00000555935 LGALS13Q9UHV8 139 aa8.35□□□□□ -1.07
CHD8-209ENST00000555935 MINPP1Q9UNW1 487 aa8.35□□□□□ -1.07
CHD8-209ENST00000555935 KIAA1024Q9UPX6 916 aa8.35□□□□□ -1.07
CHD8-209ENST00000555935 THRAP3Q9Y2W1 955 aaKnown RBP8.35□□□□□ -1.07
CHD8-209ENST00000555935 STARD13Q9Y3M8 1113 aa8.35□□□□□ -1.07
CHD8-209ENST00000555935 ALG6Q9Y672 507 aa8.35□□□□□ -1.07
CHD8-209ENST00000555935 USH1CQ9Y6N9 552 aa8.35□□□□□ -1.07
CHD8-209ENST00000555935 MROH7Q68CQ1 1323 aa8.35□□□□□ -1.07
CHD8-209ENST00000555935 ADGRA3Q8IWK6 1321 aa8.35□□□□□ -1.07
CHD8-209ENST00000555935 TRAFD1O14545 582 aaPredicted RBP8.35□□□□□ -1.07
CHD8-209ENST00000555935 MAPK13O15264 365 aa8.35□□□□□ -1.07
CHD8-209ENST00000555935 HNRNPCL1O60812 293 aaKnown RBP8.35□□□□□ -1.07
CHD8-209ENST00000555935 AKAP3O75969 853 aa8.35□□□□□ -1.07
CHD8-209ENST00000555935 NR3C1P04150 777 aa8.35□□□□□ -1.07
CHD8-209ENST00000555935 TNFAIP3P21580 790 aa8.35□□□□□ -1.07
CHD8-209ENST00000555935 HIBADHP31937 336 aaKnown RBP8.35□□□□□ -1.07
CHD8-209ENST00000555935 TNNI2P48788 182 aa8.35□□□□□ -1.07
CHD8-209ENST00000555935 IL9RQ01113 521 aa8.35□□□□□ -1.07
CHD8-209ENST00000555935 USP17L2Q6R6M4 530 aa8.35□□□□□ -1.07
CHD8-209ENST00000555935 BICDL1Q6ZP65 573 aa8.35□□□□□ -1.07
CHD8-209ENST00000555935 OTUD6AQ7L8S5 288 aa8.35□□□□□ -1.07
CHD8-209ENST00000555935 RBBP8NLQ8NC74 664 aaPredicted RBP8.35□□□□□ -1.07
CHD8-209ENST00000555935 FAM13CQ8NE31 585 aa8.35□□□□□ -1.07
CHD8-209ENST00000555935 NEDD1Q8NHV4 660 aa8.35□□□□□ -1.07
CHD8-209ENST00000555935 GDAP1Q8TB36 358 aa8.35□□□□□ -1.07
CHD8-209ENST00000555935 SLCO2A1Q92959 643 aa8.35□□□□□ -1.07
CHD8-209ENST00000555935 ARHGEF26Q96DR7 871 aa8.35□□□□□ -1.07
CHD8-209ENST00000555935 WNT8AQ9H1J5 351 aa8.35□□□□□ -1.07
CHD8-209ENST00000555935 MYLK2Q9H1R3 596 aa8.35□□□□□ -1.07
CHD8-209ENST00000555935 DHX36Q9H2U1 1008 aaKnown RBP8.35□□□□□ -1.07
CHD8-209ENST00000555935 VAT1LQ9HCJ6 419 aa8.35□□□□□ -1.07
CHD8-209ENST00000555935 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.35□□□□□ -1.07
CHD8-209ENST00000555935 TMOD4Q9NZQ9 345 aa8.35□□□□□ -1.07
CHD8-209ENST00000555935 WDR35Q9P2L0 1181 aa8.35□□□□□ -1.07
CHD8-209ENST00000555935 NPHP3-ACAD11A0A0J9YXS1 232 aa8.34□□□□□ -1.07
CHD8-209ENST00000555935 MAGEB2O15479 319 aa8.34□□□□□ -1.07
CHD8-209ENST00000555935 ECEL1O95672 775 aa8.34□□□□□ -1.07
CHD8-209ENST00000555935 ITIH2P19823 946 aa8.34□□□□□ -1.07
CHD8-209ENST00000555935 TAC1P20366 129 aa8.34□□□□□ -1.07
CHD8-209ENST00000555935 SP100P23497 879 aaPredicted RBP8.34□□□□□ -1.07
CHD8-209ENST00000555935 SLC12A3P55017 1021 aa8.34□□□□□ -1.07
CHD8-209ENST00000555935 CAV1Q03135 178 aa8.34□□□□□ -1.07
CHD8-209ENST00000555935 SF3B3Q15393 1217 aaKnown RBP8.34□□□□□ -1.07
CHD8-209ENST00000555935 SLC4A8Q2Y0W8 1093 aa8.34□□□□□ -1.07
CHD8-209ENST00000555935 TMEM154Q6P9G4 183 aa8.34□□□□□ -1.07
CHD8-209ENST00000555935 MIGA2Q7L4E1 593 aa8.34□□□□□ -1.07
CHD8-209ENST00000555935 CCDC25Q86WR0 208 aa8.34□□□□□ -1.07
CHD8-209ENST00000555935 DRAXINQ8NBI3 349 aaPredicted RBP8.34□□□□□ -1.07
CHD8-209ENST00000555935 ITFG2Q969R8 447 aa8.34□□□□□ -1.07
CHD8-209ENST00000555935 BICD1Q96G01 975 aa8.34□□□□□ -1.07
CHD8-209ENST00000555935 LRRC37BQ96QE4 947 aa8.34□□□□□ -1.07
CHD8-209ENST00000555935 SYT15Q9BQS2 421 aa8.34□□□□□ -1.07
CHD8-209ENST00000555935 THAP2Q9H0W7 228 aa8.34□□□□□ -1.07
CHD8-209ENST00000555935 DCLRE1BQ9H816 532 aa8.34□□□□□ -1.07
CHD8-209ENST00000555935 STOML1Q9UBI4 398 aa8.34□□□□□ -1.07
CHD8-209ENST00000555935 ZMYND8Q9ULU4 1186 aaPredicted RBP8.34□□□□□ -1.07
CHD8-209ENST00000555935 USP20Q9Y2K6 914 aa8.34□□□□□ -1.07
CHD8-209ENST00000555935 RTCBQ9Y3I0 505 aaKnown RBP8.34□□□□□ -1.07
CHD8-209ENST00000555935 FRMPD4Q14CM0 1322 aa8.34□□□□□ -1.07
CHD8-209ENST00000555935 SPDYE5A6NIY4 337 aa8.34□□□□□ -1.07
CHD8-209ENST00000555935 ECE2O60344 883 aa8.34□□□□□ -1.07
CHD8-209ENST00000555935 CAMTA2O94983 1202 aa8.34□□□□□ -1.07
CHD8-209ENST00000555935 ACSL3O95573 720 aa8.34□□□□□ -1.07
CHD8-209ENST00000555935 TTC4O95801 387 aa8.34□□□□□ -1.07
CHD8-209ENST00000555935 CREB1P16220 341 aa8.34□□□□□ -1.07
CHD8-209ENST00000555935 RFX1P22670 979 aa8.34□□□□□ -1.07
CHD8-209ENST00000555935 PTDSS1P48651 473 aaKnown RBP8.34□□□□□ -1.07
CHD8-209ENST00000555935 CASP5P51878 434 aa8.34□□□□□ -1.07
CHD8-209ENST00000555935 DRAP1Q14919 205 aaPredicted RBP8.34□□□□□ -1.07
CHD8-209ENST00000555935 ZRSR2Q15696 482 aaKnown RBP8.34□□□□□ -1.07
CHD8-209ENST00000555935 MUM1Q2TAK8 710 aa8.34□□□□□ -1.07
CHD8-209ENST00000555935 GJB7Q6PEY0 223 aa8.34□□□□□ -1.07
CHD8-209ENST00000555935 RGS9BPQ6ZS82 235 aa8.34□□□□□ -1.07
CHD8-209ENST00000555935 SYDE1Q6ZW31 735 aaPredicted RBP8.34□□□□□ -1.07
CHD8-209ENST00000555935 ANKRD35Q8N283 1001 aa8.34□□□□□ -1.07
CHD8-209ENST00000555935 FAM136AQ96C01 138 aa8.34□□□□□ -1.07
CHD8-209ENST00000555935 ERP27Q96DN0 273 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms