RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 CD38P28907 300 aa5.54□□□□□ -1.52
SNX6-204ENST00000555541 FAM189BP81408 668 aa5.54□□□□□ -1.52
SNX6-204ENST00000555541 ZNF174Q15697 407 aa5.54□□□□□ -1.52
SNX6-204ENST00000555541 PIK3R6Q5UE93 754 aa5.54□□□□□ -1.52
SNX6-204ENST00000555541 OR52N2Q8NGI0 321 aa5.54□□□□□ -1.52
SNX6-204ENST00000555541 RTF1Q92541 710 aaKnown RBP5.54□□□□□ -1.52
SNX6-204ENST00000555541 ARL8AQ96BM9 186 aa5.54□□□□□ -1.52
SNX6-204ENST00000555541 PDCD2LQ9BRP1 358 aa5.54□□□□□ -1.52
SNX6-204ENST00000555541 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.54□□□□□ -1.52
SNX6-204ENST00000555541 H2AFY2Q9P0M6 372 aaPredicted RBP5.54□□□□□ -1.52
SNX6-204ENST00000555541 NCDNQ9UBB6 729 aa5.54□□□□□ -1.52
SNX6-204ENST00000555541 CENPVL1A0A0U1RR11 272 aa5.53□□□□□ -1.52
SNX6-204ENST00000555541 OPA1O60313 960 aa5.53□□□□□ -1.52
SNX6-204ENST00000555541 ABHD16AO95870 558 aa5.53□□□□□ -1.52
SNX6-204ENST00000555541 CD69Q07108 199 aa5.53□□□□□ -1.52
SNX6-204ENST00000555541 LY6G5CQ5SRR4 150 aa5.53□□□□□ -1.52
SNX6-204ENST00000555541 HECTD2Q5U5R9 776 aa5.53□□□□□ -1.52
SNX6-204ENST00000555541 LILRA3Q8N6C8 439 aaPredicted RBP5.53□□□□□ -1.52
SNX6-204ENST00000555541 BEND2Q8NDZ0 799 aa5.53□□□□□ -1.52
SNX6-204ENST00000555541 CPT1CQ8TCG5 803 aa5.53□□□□□ -1.52
SNX6-204ENST00000555541 POFUT1Q9H488 388 aa5.53□□□□□ -1.52
SNX6-204ENST00000555541 CABP5Q9NP86 173 aa5.53□□□□□ -1.52
SNX6-204ENST00000555541 OXSMQ9NWU1 459 aa5.53□□□□□ -1.52
SNX6-204ENST00000555541 PPP1R12AO14974 1030 aaPredicted RBP5.52□□□□□ -1.53
SNX6-204ENST00000555541 KIAA0355O15063 1070 aa5.52□□□□□ -1.53
SNX6-204ENST00000555541 TRIM24O15164 1050 aa5.52□□□□□ -1.53
SNX6-204ENST00000555541 FSBPO95073 299 aa5.52□□□□□ -1.53
SNX6-204ENST00000555541 JMJD7P0C870 316 aa5.52□□□□□ -1.53
SNX6-204ENST00000555541 ATP2A2P16615 1042 aaKnown RBP5.52□□□□□ -1.53
SNX6-204ENST00000555541 GNAT2P19087 354 aa5.52□□□□□ -1.53
SNX6-204ENST00000555541 MRPL49Q13405 166 aaKnown RBP5.52□□□□□ -1.53
SNX6-204ENST00000555541 PTPAQ15257 358 aa5.52□□□□□ -1.53
SNX6-204ENST00000555541 MAN2A1Q16706 1144 aa5.52□□□□□ -1.53
SNX6-204ENST00000555541 PLEKHG4Q58EX7 1191 aa5.52□□□□□ -1.53
SNX6-204ENST00000555541 GPRIN1Q7Z2K8 1008 aa5.52□□□□□ -1.53
SNX6-204ENST00000555541 UNC5BQ8IZJ1 945 aa5.52□□□□□ -1.53
SNX6-204ENST00000555541 MYEOVQ96EZ4 313 aa5.52□□□□□ -1.53
SNX6-204ENST00000555541 UIMC1Q96RL1 719 aa5.52□□□□□ -1.53
SNX6-204ENST00000555541 NOL10Q9BSC4 688 aaKnown RBP5.52□□□□□ -1.53
SNX6-204ENST00000555541 KCNH6Q9H252 994 aa5.52□□□□□ -1.53
SNX6-204ENST00000555541 SYNPO2Q9UMS6 1093 aa5.52□□□□□ -1.53
SNX6-204ENST00000555541 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.52□□□□□ -1.53
SNX6-204ENST00000555541 MYPNQ86TC9 1320 aa5.51□□□□□ -1.53
SNX6-204ENST00000555541 TMEM200CA6NKL6 621 aa5.51□□□□□ -1.53
SNX6-204ENST00000555541 ZNF185O15231 689 aa5.51□□□□□ -1.53
SNX6-204ENST00000555541 B3GALT2O43825 422 aa5.51□□□□□ -1.53
SNX6-204ENST00000555541 LPXNO60711 386 aa5.51□□□□□ -1.53
SNX6-204ENST00000555541 ALDH1A2O94788 518 aa5.51□□□□□ -1.53
SNX6-204ENST00000555541 VPS72Q15906 364 aa5.51□□□□□ -1.53
SNX6-204ENST00000555541 SOGA3Q5TF21 947 aa5.51□□□□□ -1.53
SNX6-204ENST00000555541 SYNE4Q8N205 404 aa5.51□□□□□ -1.53
SNX6-204ENST00000555541 ZNF496Q96IT1 587 aaPredicted RBP5.51□□□□□ -1.53
SNX6-204ENST00000555541 FDXACB1Q9BRP7 624 aaPredicted RBP5.51□□□□□ -1.53
SNX6-204ENST00000555541 POLR2AP24928 1970 aaKnown RBP5.5□□□□□ -1.53
SNX6-204ENST00000555541 TGM5O43548 720 aa5.5□□□□□ -1.53
SNX6-204ENST00000555541 RFPL3O75679 317 aa5.5□□□□□ -1.53
SNX6-204ENST00000555541 SEC24DO94855 1032 aaPredicted RBP5.5□□□□□ -1.53
SNX6-204ENST00000555541 SCAF4O95104 1147 aaKnown RBP5.5□□□□□ -1.53
SNX6-204ENST00000555541 LY86O95711 162 aa5.5□□□□□ -1.53
SNX6-204ENST00000555541 ZEB1P37275 1124 aaPredicted RBP5.5□□□□□ -1.53
SNX6-204ENST00000555541 CASRP41180 1078 aa5.5□□□□□ -1.53
SNX6-204ENST00000555541 RANGAP1P46060 587 aaPredicted RBP5.5□□□□□ -1.53
SNX6-204ENST00000555541 KRTAP10-7P60409 375 aaPredicted RBP5.5□□□□□ -1.53
SNX6-204ENST00000555541 ZBTB41Q5SVQ8 909 aa5.5□□□□□ -1.53
SNX6-204ENST00000555541 TIGD7Q6NT04 549 aaPredicted RBP5.5□□□□□ -1.53
SNX6-204ENST00000555541 KCNV1Q6PIU1 500 aa5.5□□□□□ -1.53
SNX6-204ENST00000555541 Q6YL49 198 aa5.5□□□□□ -1.53
SNX6-204ENST00000555541 C7orf31Q8N865 590 aa5.5□□□□□ -1.53
SNX6-204ENST00000555541 FAM98AQ8NCA5 519 aaKnown RBP5.5□□□□□ -1.53
SNX6-204ENST00000555541 PMFBP1Q8TBY8 1022 aa5.5□□□□□ -1.53
SNX6-204ENST00000555541 CPPED1Q9BRF8 314 aaPredicted RBP5.5□□□□□ -1.53
SNX6-204ENST00000555541 NDC1Q9BTX1 674 aa5.5□□□□□ -1.53
SNX6-204ENST00000555541 MTFR1LQ9H019 292 aa5.5□□□□□ -1.53
SNX6-204ENST00000555541 ALG13Q9NP73 1137 aaKnown RBP5.5□□□□□ -1.53
SNX6-204ENST00000555541 TOMM22Q9NS69 142 aa5.5□□□□□ -1.53
SNX6-204ENST00000555541 SYBUQ9NX95 663 aa5.5□□□□□ -1.53
SNX6-204ENST00000555541 CDK11AQ9UQ88 783 aaPredicted RBP5.5□□□□□ -1.53
SNX6-204ENST00000555541 CHST2Q9Y4C5 530 aa5.5□□□□□ -1.53
SNX6-204ENST00000555541 COL11A2P13942 1736 aaPredicted RBP5.49□□□□□ -1.53
SNX6-204ENST00000555541 DNAJC6O75061 913 aa5.49□□□□□ -1.53
SNX6-204ENST00000555541 APOL3O95236 402 aa5.49□□□□□ -1.53
SNX6-204ENST00000555541 PFKMP08237 780 aa5.49□□□□□ -1.53
SNX6-204ENST00000555541 TYRP1P17643 537 aa5.49□□□□□ -1.53
SNX6-204ENST00000555541 DSG1Q02413 1049 aa5.49□□□□□ -1.53
SNX6-204ENST00000555541 LRRC32Q14392 662 aa5.49□□□□□ -1.53
SNX6-204ENST00000555541 TIGD2Q4W5G0 525 aa5.49□□□□□ -1.53
SNX6-204ENST00000555541 STRIP1Q5VSL9 837 aa5.49□□□□□ -1.53
SNX6-204ENST00000555541 BTNL9Q6UXG8 535 aa5.49□□□□□ -1.53
SNX6-204ENST00000555541 DOK3Q7L591 496 aa5.49□□□□□ -1.53
SNX6-204ENST00000555541 TAS1R1Q7RTX1 841 aa5.49□□□□□ -1.53
SNX6-204ENST00000555541 MSL3Q8N5Y2 521 aaKnown RBP5.49□□□□□ -1.53
SNX6-204ENST00000555541 HIST1H2AHQ96KK5 128 aa5.49□□□□□ -1.53
SNX6-204ENST00000555541 HIST1H2AJQ99878 128 aa5.49□□□□□ -1.53
SNX6-204ENST00000555541 SLC46A2Q9BY10 475 aa5.49□□□□□ -1.53
SNX6-204ENST00000555541 TMPRSS11EQ9UL52 423 aa5.49□□□□□ -1.53
SNX6-204ENST00000555541 LEFTY2O00292 366 aa5.48□□□□□ -1.53
SNX6-204ENST00000555541 PCDH8O95206 1070 aa5.48□□□□□ -1.53
SNX6-204ENST00000555541 F2P00734 622 aa5.48□□□□□ -1.53
SNX6-204ENST00000555541 CDK4P11802 303 aa5.48□□□□□ -1.53
SNX6-204ENST00000555541 LAG3P18627 525 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms