RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 FAM228AQ86W67 206 aa10.87□□□□□ -0.67
PSEN1-213ENST00000555386 GRAMD1CQ8IYS0 662 aa10.87□□□□□ -0.67
PSEN1-213ENST00000555386 CCDC34Q96HJ3 373 aa10.87□□□□□ -0.67
PSEN1-213ENST00000555386 IFT74Q96LB3 600 aa10.87□□□□□ -0.67
PSEN1-213ENST00000555386 GCOM2Q9BZD3 368 aaPredicted RBP10.87□□□□□ -0.67
PSEN1-213ENST00000555386 INO80BQ9C086 356 aaPredicted RBP10.87□□□□□ -0.67
PSEN1-213ENST00000555386 KCND1Q9NSA2 647 aa10.87□□□□□ -0.67
PSEN1-213ENST00000555386 CXXC1Q9P0U4 656 aaPredicted RBP10.87□□□□□ -0.67
PSEN1-213ENST00000555386 PADI3Q9ULW8 664 aa10.87□□□□□ -0.67
PSEN1-213ENST00000555386 ST3GAL5Q9UNP4 418 aa10.87□□□□□ -0.67
PSEN1-213ENST00000555386 FAM13AO94988 1023 aa10.86□□□□□ -0.67
PSEN1-213ENST00000555386 UPP2O95045 317 aa10.86□□□□□ -0.67
PSEN1-213ENST00000555386 PARNO95453 639 aaKnown RBP10.86□□□□□ -0.67
PSEN1-213ENST00000555386 CXCL10P02778 98 aa10.86□□□□□ -0.67
PSEN1-213ENST00000555386 DARSP14868 501 aaKnown RBP10.86□□□□□ -0.67
PSEN1-213ENST00000555386 EIF4BP23588 611 aaKnown RBP10.86□□□□□ -0.67
PSEN1-213ENST00000555386 AFMP43652 599 aa10.86□□□□□ -0.67
PSEN1-213ENST00000555386 PHKA2P46019 1235 aa10.86□□□□□ -0.67
PSEN1-213ENST00000555386 KCNJ6P48051 423 aa10.86□□□□□ -0.67
PSEN1-213ENST00000555386 TMEM132AQ24JP5 1023 aa10.86□□□□□ -0.67
PSEN1-213ENST00000555386 CATSPER4Q7RTX7 472 aa10.86□□□□□ -0.67
PSEN1-213ENST00000555386 LRRC8AQ8IWT6 810 aa10.86□□□□□ -0.67
PSEN1-213ENST00000555386 IQUBQ8NA54 791 aa10.86□□□□□ -0.67
PSEN1-213ENST00000555386 DEPTORQ8TB45 409 aa10.86□□□□□ -0.67
PSEN1-213ENST00000555386 KIFAP3Q92845 792 aa10.86□□□□□ -0.67
PSEN1-213ENST00000555386 REEP2Q9BRK0 252 aa10.86□□□□□ -0.67
PSEN1-213ENST00000555386 MINDY3Q9H8M7 445 aa10.86□□□□□ -0.67
PSEN1-213ENST00000555386 STK17AQ9UEE5 414 aa10.86□□□□□ -0.67
PSEN1-213ENST00000555386 SERTAD1Q9UHV2 236 aa10.86□□□□□ -0.67
PSEN1-213ENST00000555386 USP20Q9Y2K6 914 aa10.86□□□□□ -0.67
PSEN1-213ENST00000555386 GBF1Q92538 1859 aa10.86□□□□□ -0.67
PSEN1-213ENST00000555386 PTPRSQ13332 1948 aa10.85□□□□□ -0.67
PSEN1-213ENST00000555386 DENND3A2RUS2 1198 aa10.85□□□□□ -0.67
PSEN1-213ENST00000555386 MYMKA6NI61 221 aa10.85□□□□□ -0.67
PSEN1-213ENST00000555386 GRXCR1A8MXD5 290 aa10.85□□□□□ -0.67
PSEN1-213ENST00000555386 GPR182O15218 404 aa10.85□□□□□ -0.67
PSEN1-213ENST00000555386 ASAP2O43150 1006 aa10.85□□□□□ -0.67
PSEN1-213ENST00000555386 TBCAO75347 108 aaKnown RBP10.85□□□□□ -0.67
PSEN1-213ENST00000555386 PFKMP08237 780 aa10.85□□□□□ -0.67
PSEN1-213ENST00000555386 IDEP14735 1019 aa10.85□□□□□ -0.67
PSEN1-213ENST00000555386 CASP1P29466 404 aa10.85□□□□□ -0.67
PSEN1-213ENST00000555386 NCAPHQ15003 741 aa10.85□□□□□ -0.67
PSEN1-213ENST00000555386 LONRF3Q496Y0 759 aa10.85□□□□□ -0.67
PSEN1-213ENST00000555386 CT47A1Q5JQC4 288 aaPredicted RBP10.85□□□□□ -0.67
PSEN1-213ENST00000555386 NT5DC1Q5TFE4 455 aa10.85□□□□□ -0.67
PSEN1-213ENST00000555386 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.85□□□□□ -0.67
PSEN1-213ENST00000555386 ZNF410Q86VK4 478 aa10.85□□□□□ -0.67
PSEN1-213ENST00000555386 TDHQ8IZJ6 230 aa10.85□□□□□ -0.67
PSEN1-213ENST00000555386 MYOCDQ8IZQ8 938 aa10.85□□□□□ -0.67
PSEN1-213ENST00000555386 DAW1Q8N136 415 aa10.85□□□□□ -0.67
PSEN1-213ENST00000555386 MYCT1Q8N699 235 aa10.85□□□□□ -0.67
PSEN1-213ENST00000555386 TRIML1Q8N9V2 468 aa10.85□□□□□ -0.67
PSEN1-213ENST00000555386 CNNM3Q8NE01 707 aa10.85□□□□□ -0.67
PSEN1-213ENST00000555386 CACTINQ8WUQ7 758 aaKnown RBP10.85□□□□□ -0.67
PSEN1-213ENST00000555386 DDX12PQ92771 950 aa10.85□□□□□ -0.67
PSEN1-213ENST00000555386 DRC1Q96MC2 740 aa10.85□□□□□ -0.67
PSEN1-213ENST00000555386 BLZF1Q9H2G9 400 aa10.85□□□□□ -0.67
PSEN1-213ENST00000555386 IFT122Q9HBG6 1241 aa10.85□□□□□ -0.67
PSEN1-213ENST00000555386 TBC1D7Q9P0N9 293 aa10.85□□□□□ -0.67
PSEN1-213ENST00000555386 DACH1Q9UI36 760 aa10.85□□□□□ -0.67
PSEN1-213ENST00000555386 SLC4A7Q9Y6M7 1214 aa10.85□□□□□ -0.67
PSEN1-213ENST00000555386 SLC16A4O15374 487 aa10.84□□□□□ -0.67
PSEN1-213ENST00000555386 CBFA2T2O43439 604 aa10.84□□□□□ -0.67
PSEN1-213ENST00000555386 MGEA5O60502 916 aa10.84□□□□□ -0.67
PSEN1-213ENST00000555386 ERLIN2O94905 339 aa10.84□□□□□ -0.67
PSEN1-213ENST00000555386 SFPQP23246 707 aaKnown RBP eCLIP10.84□□□□□ -0.67
PSEN1-213ENST00000555386 GUCY2CP25092 1073 aa10.84□□□□□ -0.67
PSEN1-213ENST00000555386 BMP8BP34820 402 aa10.84□□□□□ -0.67
PSEN1-213ENST00000555386 DEFB103AP81534 67 aa10.84□□□□□ -0.67
PSEN1-213ENST00000555386 CDC42EP1Q00587 391 aa10.84□□□□□ -0.67
PSEN1-213ENST00000555386 MYL5Q02045 173 aa10.84□□□□□ -0.67
PSEN1-213ENST00000555386 DMP1Q13316 513 aaPredicted RBP10.84□□□□□ -0.67
PSEN1-213ENST00000555386 E2F4Q16254 413 aa10.84□□□□□ -0.67
PSEN1-213ENST00000555386 FAM109BQ6ICB4 259 aaPredicted RBP10.84□□□□□ -0.67
PSEN1-213ENST00000555386 ZBTB8OSQ8IWT0 167 aa10.84□□□□□ -0.67
PSEN1-213ENST00000555386 C17orf53Q8N3J3 647 aaPredicted RBP10.84□□□□□ -0.67
PSEN1-213ENST00000555386 USP38Q8NB14 1042 aa10.84□□□□□ -0.67
PSEN1-213ENST00000555386 RNF169Q8NCN4 708 aa10.84□□□□□ -0.67
PSEN1-213ENST00000555386 CCDC150Q8NCX0 1101 aa10.84□□□□□ -0.67
PSEN1-213ENST00000555386 HERVK_113Q902F9 699 aa10.84□□□□□ -0.67
PSEN1-213ENST00000555386 CPB2Q96IY4 423 aa10.84□□□□□ -0.67
PSEN1-213ENST00000555386 ADAM2Q99965 735 aa10.84□□□□□ -0.67
PSEN1-213ENST00000555386 MTIF3Q9H2K0 278 aaKnown RBP10.84□□□□□ -0.67
PSEN1-213ENST00000555386 TMX1Q9H3N1 280 aa10.84□□□□□ -0.67
PSEN1-213ENST00000555386 ERVK-5Q9HDB9 667 aa10.84□□□□□ -0.67
PSEN1-213ENST00000555386 KMT5AQ9NQR1 393 aa10.84□□□□□ -0.67
PSEN1-213ENST00000555386 PIN4Q9Y237 131 aaKnown RBP10.84□□□□□ -0.67
PSEN1-213ENST00000555386 SZT2Q5T011 3432 aa10.84□□□□□ -0.67
PSEN1-213ENST00000555386 B4GALT5O43286 388 aa10.83□□□□□ -0.68
PSEN1-213ENST00000555386 NRDCO43847 1150 aa10.83□□□□□ -0.68
PSEN1-213ENST00000555386 ZSCAN20P17040 1043 aaPredicted RBP10.83□□□□□ -0.68
PSEN1-213ENST00000555386 NAMPTP43490 491 aa10.83□□□□□ -0.68
PSEN1-213ENST00000555386 NPTX2P47972 431 aa10.83□□□□□ -0.68
PSEN1-213ENST00000555386 RABGGTBP53611 331 aa10.83□□□□□ -0.68
PSEN1-213ENST00000555386 PTENP60484 403 aa10.83□□□□□ -0.68
PSEN1-213ENST00000555386 WDR5P61964 334 aaKnown RBP10.83□□□□□ -0.68
PSEN1-213ENST00000555386 ASIC1P78348 528 aa10.83□□□□□ -0.68
PSEN1-213ENST00000555386 LRMPQ12912 555 aa10.83□□□□□ -0.68
PSEN1-213ENST00000555386 MAPK7Q13164 816 aa10.83□□□□□ -0.68
PSEN1-213ENST00000555386 GIT2Q14161 759 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms