RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 C1QTNF1Q9BXJ1 281 aa13.14□□□□□ -0.31
VRK1-204ENST00000555351 TLE6Q9H808 572 aa13.14□□□□□ -0.31
VRK1-204ENST00000555351 TBC1D13Q9NVG8 400 aa13.14□□□□□ -0.31
VRK1-204ENST00000555351 HCSTQ9UBK5 93 aa13.14□□□□□ -0.31
VRK1-204ENST00000555351 LRWD1Q9UFC0 647 aa13.14□□□□□ -0.31
VRK1-204ENST00000555351 CD207Q9UJ71 328 aa13.14□□□□□ -0.31
VRK1-204ENST00000555351 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.14□□□□□ -0.31
VRK1-204ENST00000555351 MUC3AQ02505 3323 aa13.13□□□□□ -0.31
VRK1-204ENST00000555351 INO80B-WBP1J3KQ70 363 aa13.13□□□□□ -0.31
VRK1-204ENST00000555351 MBTPS2O43462 519 aa13.13□□□□□ -0.31
VRK1-204ENST00000555351 USO1O60763 962 aaKnown RBP13.13□□□□□ -0.31
VRK1-204ENST00000555351 TBX10O75333 385 aa13.13□□□□□ -0.31
VRK1-204ENST00000555351 SRGAP2BP0DMP2 458 aa13.13□□□□□ -0.31
VRK1-204ENST00000555351 NRIP1P48552 1158 aa13.13□□□□□ -0.31
VRK1-204ENST00000555351 NDUFV1P49821 464 aa13.13□□□□□ -0.31
VRK1-204ENST00000555351 PTGDRQ13258 359 aa13.13□□□□□ -0.31
VRK1-204ENST00000555351 KCNC3Q14003 757 aa13.13□□□□□ -0.31
VRK1-204ENST00000555351 GIT2Q14161 759 aa13.13□□□□□ -0.31
VRK1-204ENST00000555351 AMHR2Q16671 573 aa13.13□□□□□ -0.31
VRK1-204ENST00000555351 DUSP6Q16828 381 aa13.13□□□□□ -0.31
VRK1-204ENST00000555351 FAM187BQ17R55 369 aa13.13□□□□□ -0.31
VRK1-204ENST00000555351 CDCA2Q69YH5 1023 aaPredicted RBP13.13□□□□□ -0.31
VRK1-204ENST00000555351 ADGRD2Q7Z7M1 963 aa13.13□□□□□ -0.31
VRK1-204ENST00000555351 HACE1Q8IYU2 909 aa13.13□□□□□ -0.31
VRK1-204ENST00000555351 TMEM169Q96HH4 297 aa13.13□□□□□ -0.31
VRK1-204ENST00000555351 POP1Q99575 1024 aaKnown RBP13.13□□□□□ -0.31
VRK1-204ENST00000555351 TCF25Q9BQ70 676 aa13.13□□□□□ -0.31
VRK1-204ENST00000555351 TMEM175Q9BSA9 504 aa13.13□□□□□ -0.31
VRK1-204ENST00000555351 CSRNP2Q9H175 543 aa13.13□□□□□ -0.31
VRK1-204ENST00000555351 POLR3FQ9H1D9 316 aaPredicted RBP13.13□□□□□ -0.31
VRK1-204ENST00000555351 C2orf40Q9H1Z8 148 aa13.13□□□□□ -0.31
VRK1-204ENST00000555351 RSAD1Q9HA92 442 aa13.13□□□□□ -0.31
VRK1-204ENST00000555351 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.13□□□□□ -0.31
VRK1-204ENST00000555351 BMP2KQ9NSY1 1161 aaPredicted RBP13.13□□□□□ -0.31
VRK1-204ENST00000555351 IRAK3Q9Y616 596 aa13.13□□□□□ -0.31
VRK1-204ENST00000555351 ARHGEF35A5YM69 484 aa13.12□□□□□ -0.31
VRK1-204ENST00000555351 C19orf67A6NJJ6 358 aa13.12□□□□□ -0.31
VRK1-204ENST00000555351 IL9P15248 144 aa13.12□□□□□ -0.31
VRK1-204ENST00000555351 GJB2P29033 226 aa13.12□□□□□ -0.31
VRK1-204ENST00000555351 GTF2F1P35269 517 aaKnown RBP eCLIP13.12□□□□□ -0.31
VRK1-204ENST00000555351 CCT6AP40227 531 aaKnown RBP13.12□□□□□ -0.31
VRK1-204ENST00000555351 RNASELQ05823 741 aaKnown RBP13.12□□□□□ -0.31
VRK1-204ENST00000555351 DLX2Q07687 328 aaPredicted RBP13.12□□□□□ -0.31
VRK1-204ENST00000555351 SMC1AQ14683 1233 aaKnown RBP13.12□□□□□ -0.31
VRK1-204ENST00000555351 PPP2R5AQ15172 486 aa13.12□□□□□ -0.31
VRK1-204ENST00000555351 SLC27A1Q6PCB7 646 aa13.12□□□□□ -0.31
VRK1-204ENST00000555351 POTEGQ6S5H5 508 aa13.12□□□□□ -0.31
VRK1-204ENST00000555351 PADI6Q6TGC4 694 aa13.12□□□□□ -0.31
VRK1-204ENST00000555351 EP400NLQ6ZTU2 488 aa13.12□□□□□ -0.31
VRK1-204ENST00000555351 DDX53Q86TM3 631 aaKnown RBP13.12□□□□□ -0.31
VRK1-204ENST00000555351 ZBTB8OSQ8IWT0 167 aa13.12□□□□□ -0.31
VRK1-204ENST00000555351 ADHFE1Q8IWW8 467 aa13.12□□□□□ -0.31
VRK1-204ENST00000555351 GJD3Q8N144 294 aa13.12□□□□□ -0.31
VRK1-204ENST00000555351 MRPL43Q8N983 215 aaKnown RBP13.12□□□□□ -0.31
VRK1-204ENST00000555351 SMRP1Q8NCR6 262 aa13.12□□□□□ -0.31
VRK1-204ENST00000555351 LPPQ93052 612 aa13.12□□□□□ -0.31
VRK1-204ENST00000555351 IGSF21Q96ID5 467 aa13.12□□□□□ -0.31
VRK1-204ENST00000555351 FZD8Q9H461 694 aa13.12□□□□□ -0.31
VRK1-204ENST00000555351 IGFLR1Q9H665 355 aa13.12□□□□□ -0.31
VRK1-204ENST00000555351 NRDE2Q9H7Z3 1164 aa13.12□□□□□ -0.31
VRK1-204ENST00000555351 ENTPD7Q9NQZ7 604 aa13.12□□□□□ -0.31
VRK1-204ENST00000555351 PRMT7Q9NVM4 692 aaPredicted RBP13.12□□□□□ -0.31
VRK1-204ENST00000555351 CLEC1BQ9P126 229 aa13.12□□□□□ -0.31
VRK1-204ENST00000555351 GIT1Q9Y2X7 761 aa13.12□□□□□ -0.31
VRK1-204ENST00000555351 PCDHB6Q9Y5E3 794 aa13.12□□□□□ -0.31
VRK1-204ENST00000555351 A0A1B0GUA9 196 aa13.11□□□□□ -0.31
VRK1-204ENST00000555351 H3BQV1 296 aa13.11□□□□□ -0.31
VRK1-204ENST00000555351 LINC01565O15544 149 aa13.11□□□□□ -0.31
VRK1-204ENST00000555351 SLC26A4O43511 780 aa13.11□□□□□ -0.31
VRK1-204ENST00000555351 ZC3H11AO75152 810 aaKnown RBP eCLIP13.11□□□□□ -0.31
VRK1-204ENST00000555351 CD2BP2O95400 341 aaKnown RBP13.11□□□□□ -0.31
VRK1-204ENST00000555351 GLP2RO95838 553 aa13.11□□□□□ -0.31
VRK1-204ENST00000555351 GALTP07902 379 aa13.11□□□□□ -0.31
VRK1-204ENST00000555351 ITGA4P13612 1032 aa13.11□□□□□ -0.31
VRK1-204ENST00000555351 HOXB8P17481 243 aaPredicted RBP13.11□□□□□ -0.31
VRK1-204ENST00000555351 ARF4P18085 180 aaPredicted RBP13.11□□□□□ -0.31
VRK1-204ENST00000555351 NAMPTP43490 491 aa13.11□□□□□ -0.31
VRK1-204ENST00000555351 EFNA5P52803 228 aa13.11□□□□□ -0.31
VRK1-204ENST00000555351 ATP2C1P98194 919 aaPredicted RBP13.11□□□□□ -0.31
VRK1-204ENST00000555351 ZP2Q05996 745 aa13.11□□□□□ -0.31
VRK1-204ENST00000555351 KRT79Q5XKE5 535 aa13.11□□□□□ -0.31
VRK1-204ENST00000555351 ARL6IP4Q66PJ3 421 aaKnown RBP13.11□□□□□ -0.31
VRK1-204ENST00000555351 DTHD1Q6ZMT9 781 aa13.11□□□□□ -0.31
VRK1-204ENST00000555351 TMC7Q7Z402 723 aa13.11□□□□□ -0.31
VRK1-204ENST00000555351 SMG8Q8ND04 991 aaKnown RBP13.11□□□□□ -0.31
VRK1-204ENST00000555351 KIFAP3Q92845 792 aa13.11□□□□□ -0.31
VRK1-204ENST00000555351 SMC3Q9UQE7 1217 aa13.11□□□□□ -0.31
VRK1-204ENST00000555351 IPPQ9Y573 584 aa13.11□□□□□ -0.31
VRK1-204ENST00000555351 PHLPP2Q6ZVD8 1323 aa13.11□□□□□ -0.31
VRK1-204ENST00000555351 LRRIQ4A6NIV6 560 aa13.1□□□□□ -0.31
VRK1-204ENST00000555351 MEIS3P2A8K0S8 358 aa13.1□□□□□ -0.31
VRK1-204ENST00000555351 PI4K2BG5E9Z4 385 aa13.1□□□□□ -0.31
VRK1-204ENST00000555351 ALDH2P05091 517 aa13.1□□□□□ -0.31
VRK1-204ENST00000555351 CUL4AQ13619 759 aa13.1□□□□□ -0.31
VRK1-204ENST00000555351 NBR1Q14596 966 aa13.1□□□□□ -0.31
VRK1-204ENST00000555351 MCTP1Q6DN14 999 aa13.1□□□□□ -0.31
VRK1-204ENST00000555351 RBM23Q86U06 439 aaKnown RBP13.1□□□□□ -0.31
VRK1-204ENST00000555351 SNX29Q8TEQ0 813 aa13.1□□□□□ -0.31
VRK1-204ENST00000555351 TIPINQ9BVW5 301 aa13.1□□□□□ -0.31
VRK1-204ENST00000555351 TRIM6Q9C030 488 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms