RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 GOLGA6CA6NDK9 693 aa13.16□□□□□ -0.3
ARHGEF40-206ENST00000555232 GOLGA6DP0CG33 693 aa13.16□□□□□ -0.3
ARHGEF40-206ENST00000555232 MAGEA9P43362 315 aa13.16□□□□□ -0.3
ARHGEF40-206ENST00000555232 NPTX2P47972 431 aa13.16□□□□□ -0.3
ARHGEF40-206ENST00000555232 AMHR2Q16671 573 aa13.16□□□□□ -0.3
ARHGEF40-206ENST00000555232 FAM182AQ5T1J6 154 aa13.16□□□□□ -0.3
ARHGEF40-206ENST00000555232 TRIM65Q6PJ69 517 aa13.16□□□□□ -0.3
ARHGEF40-206ENST00000555232 ZNF365Q70YC5 407 aa13.16□□□□□ -0.3
ARHGEF40-206ENST00000555232 MOV10L1Q9BXT6 1211 aaKnown RBP13.16□□□□□ -0.3
ARHGEF40-206ENST00000555232 TUFT1Q9NNX1 390 aa13.16□□□□□ -0.3
ARHGEF40-206ENST00000555232 GOLGA6AQ9NYA3 693 aa13.16□□□□□ -0.3
ARHGEF40-206ENST00000555232 PCSK1NQ9UHG2 260 aa13.16□□□□□ -0.3
ARHGEF40-206ENST00000555232 CPA4Q9UI42 421 aa13.16□□□□□ -0.3
ARHGEF40-206ENST00000555232 UTP11Q9Y3A2 253 aaKnown RBP13.16□□□□□ -0.3
ARHGEF40-206ENST00000555232 MRPL42Q9Y6G3 142 aaKnown RBP13.16□□□□□ -0.3
ARHGEF40-206ENST00000555232 SNED1Q8TER0 1413 aa13.16□□□□□ -0.3
ARHGEF40-206ENST00000555232 EPHX2P34913 555 aa13.16□□□□□ -0.3
ARHGEF40-206ENST00000555232 DHX9Q08211 1270 aaKnown RBP13.16□□□□□ -0.3
ARHGEF40-206ENST00000555232 IFT20Q8IY31 132 aa13.16□□□□□ -0.3
ARHGEF40-206ENST00000555232 SLC20A1Q8WUM9 679 aa13.16□□□□□ -0.3
ARHGEF40-206ENST00000555232 PSPC1Q8WXF1 523 aaKnown RBP13.16□□□□□ -0.3
ARHGEF40-206ENST00000555232 PPM1EQ8WY54 764 aa13.16□□□□□ -0.3
ARHGEF40-206ENST00000555232 GPRC5DQ9NZD1 345 aa13.16□□□□□ -0.3
ARHGEF40-206ENST00000555232 MTUS1Q9ULD2 1270 aa13.16□□□□□ -0.3
ARHGEF40-206ENST00000555232 SNX24Q9Y343 169 aa13.16□□□□□ -0.3
ARHGEF40-206ENST00000555232 GRAP2O75791 330 aa13.16□□□□□ -0.3
ARHGEF40-206ENST00000555232 PON1P27169 355 aa13.16□□□□□ -0.3
ARHGEF40-206ENST00000555232 MAP2K2P36507 400 aa13.16□□□□□ -0.3
ARHGEF40-206ENST00000555232 ITGB3BPQ13352 177 aaPredicted RBP13.16□□□□□ -0.3
ARHGEF40-206ENST00000555232 CCDC26Q8TAB7 109 aa13.16□□□□□ -0.3
ARHGEF40-206ENST00000555232 PLVAPQ9BX97 442 aa13.16□□□□□ -0.3
ARHGEF40-206ENST00000555232 CNOT8Q9UFF9 292 aaKnown RBP13.16□□□□□ -0.3
ARHGEF40-206ENST00000555232 H3BQF6 201 aa13.15□□□□□ -0.3
ARHGEF40-206ENST00000555232 MAP3K6O95382 1288 aa13.15□□□□□ -0.3
ARHGEF40-206ENST00000555232 TNNC2P02585 160 aa13.15□□□□□ -0.3
ARHGEF40-206ENST00000555232 SNHG28P0DPA3 235 aa13.15□□□□□ -0.3
ARHGEF40-206ENST00000555232 SLC12A3P55017 1021 aa13.15□□□□□ -0.3
ARHGEF40-206ENST00000555232 EMC2Q15006 297 aa13.15□□□□□ -0.3
ARHGEF40-206ENST00000555232 WDR72Q3MJ13 1102 aa13.15□□□□□ -0.3
ARHGEF40-206ENST00000555232 CBWD6Q4V339 395 aa13.15□□□□□ -0.3
ARHGEF40-206ENST00000555232 CBWD3Q5JTY5 395 aa13.15□□□□□ -0.3
ARHGEF40-206ENST00000555232 CBWD5Q5RIA9 395 aa13.15□□□□□ -0.3
ARHGEF40-206ENST00000555232 PRAMEF19Q5SWL8 479 aa13.15□□□□□ -0.3
ARHGEF40-206ENST00000555232 CATSPER4Q7RTX7 472 aa13.15□□□□□ -0.3
ARHGEF40-206ENST00000555232 ZNF720Q7Z2F6 126 aa13.15□□□□□ -0.3
ARHGEF40-206ENST00000555232 CCDC60Q8IWA6 550 aaPredicted RBP13.15□□□□□ -0.3
ARHGEF40-206ENST00000555232 MTMR8Q96EF0 704 aa13.15□□□□□ -0.3
ARHGEF40-206ENST00000555232 CDCA5Q96FF9 252 aa13.15□□□□□ -0.3
ARHGEF40-206ENST00000555232 ZWILCHQ9H900 591 aa13.15□□□□□ -0.3
ARHGEF40-206ENST00000555232 PPANQ9NQ55 473 aaKnown RBP13.15□□□□□ -0.3
ARHGEF40-206ENST00000555232 TTC7AQ9ULT0 858 aaPredicted RBP13.15□□□□□ -0.3
ARHGEF40-206ENST00000555232 VTNP04004 478 aa13.15□□□□□ -0.3
ARHGEF40-206ENST00000555232 MYL3P08590 195 aa13.15□□□□□ -0.3
ARHGEF40-206ENST00000555232 ZNF286BP0CG31 522 aa13.15□□□□□ -0.3
ARHGEF40-206ENST00000555232 KCNJ1P48048 391 aa13.15□□□□□ -0.3
ARHGEF40-206ENST00000555232 CCNA1P78396 465 aa13.15□□□□□ -0.3
ARHGEF40-206ENST00000555232 CASP8Q14790 479 aa13.15□□□□□ -0.3
ARHGEF40-206ENST00000555232 TAS1R2Q8TE23 839 aa13.15□□□□□ -0.3
ARHGEF40-206ENST00000555232 ADPGKQ9BRR6 497 aa13.15□□□□□ -0.3
ARHGEF40-206ENST00000555232 CXorf56Q9H5V9 222 aa13.15□□□□□ -0.3
ARHGEF40-206ENST00000555232 KCNMB3Q9NPA1 279 aa13.15□□□□□ -0.3
ARHGEF40-206ENST00000555232 INPP5FQ9Y2H2 1132 aa13.15□□□□□ -0.3
ARHGEF40-206ENST00000555232 FAM237AA0A1B0GTK4 181 aa13.15□□□□□ -0.3
ARHGEF40-206ENST00000555232 N4BP1O75113 896 aaKnown RBP13.15□□□□□ -0.3
ARHGEF40-206ENST00000555232 PLS3P13797 630 aa13.15□□□□□ -0.3
ARHGEF40-206ENST00000555232 CTNNA1P35221 906 aaKnown RBP13.15□□□□□ -0.3
ARHGEF40-206ENST00000555232 LIG3P49916 1009 aa13.15□□□□□ -0.3
ARHGEF40-206ENST00000555232 LIN9Q5TKA1 542 aa13.15□□□□□ -0.3
ARHGEF40-206ENST00000555232 CYP4F22Q6NT55 531 aa13.15□□□□□ -0.3
ARHGEF40-206ENST00000555232 PPP4R3CPQ6ZMV5 832 aa13.15□□□□□ -0.3
ARHGEF40-206ENST00000555232 MCPH1Q8NEM0 835 aa13.15□□□□□ -0.3
ARHGEF40-206ENST00000555232 ETNPPLQ8TBG4 499 aa13.15□□□□□ -0.3
ARHGEF40-206ENST00000555232 EXOC4Q96A65 974 aa13.15□□□□□ -0.3
ARHGEF40-206ENST00000555232 PNKPQ96T60 521 aa13.15□□□□□ -0.3
ARHGEF40-206ENST00000555232 CELF4Q9BZC1 486 aaKnown RBP13.15□□□□□ -0.3
ARHGEF40-206ENST00000555232 L2HGDHQ9H9P8 463 aa13.15□□□□□ -0.3
ARHGEF40-206ENST00000555232 AGO4Q9HCK5 861 aaKnown RBP13.15□□□□□ -0.3
ARHGEF40-206ENST00000555232 TBK1Q9UHD2 729 aa13.15□□□□□ -0.3
ARHGEF40-206ENST00000555232 MARF1Q9Y4F3 1742 aaKnown RBP13.15□□□□□ -0.31
ARHGEF40-206ENST00000555232 TBX3O15119 743 aa13.14□□□□□ -0.31
ARHGEF40-206ENST00000555232 KLHDC7AQ5VTJ3 777 aa13.14□□□□□ -0.31
ARHGEF40-206ENST00000555232 C2orf69Q8N8R5 385 aa13.14□□□□□ -0.31
ARHGEF40-206ENST00000555232 CALN1Q9BXU9 219 aa13.14□□□□□ -0.31
ARHGEF40-206ENST00000555232 KIAA1683Q9H0B3 1180 aa13.14□□□□□ -0.31
ARHGEF40-206ENST00000555232 WRAP73Q9P2S5 460 aaPredicted RBP13.14□□□□□ -0.31
ARHGEF40-206ENST00000555232 PLAGL2Q9UPG8 496 aa13.14□□□□□ -0.31
ARHGEF40-206ENST00000555232 RDXP35241 583 aaKnown RBP13.14□□□□□ -0.31
ARHGEF40-206ENST00000555232 DAB2IPQ5VWQ8 1189 aa13.14□□□□□ -0.31
ARHGEF40-206ENST00000555232 PPP1R21Q6ZMI0 780 aa13.14□□□□□ -0.31
ARHGEF40-206ENST00000555232 RIT2Q99578 217 aa13.14□□□□□ -0.31
ARHGEF40-206ENST00000555232 ZNF148Q9UQR1 794 aa13.14□□□□□ -0.31
ARHGEF40-206ENST00000555232 TELO2Q9Y4R8 837 aa13.14□□□□□ -0.31
ARHGEF40-206ENST00000555232 MYO5AQ9Y4I1 1855 aaKnown RBP13.14□□□□□ -0.31
ARHGEF40-206ENST00000555232 ANKRD63C9JTQ0 380 aa13.14□□□□□ -0.31
ARHGEF40-206ENST00000555232 GJB6O95452 261 aa13.14□□□□□ -0.31
ARHGEF40-206ENST00000555232 NT5C2P49902 561 aa13.14□□□□□ -0.31
ARHGEF40-206ENST00000555232 MRPS9P82933 396 aaKnown RBP13.14□□□□□ -0.31
ARHGEF40-206ENST00000555232 WDR59Q6PJI9 974 aa13.14□□□□□ -0.31
ARHGEF40-206ENST00000555232 ZNF571Q7Z3V5 609 aaPredicted RBP13.14□□□□□ -0.31
ARHGEF40-206ENST00000555232 ANKRD13AQ8IZ07 590 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms