RNA–Protein interactions for RNA: ENST00000555055.5

XRCC3-211, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC3, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-211ENST00000555055 CCT5P48643 541 aa16.08■□□□□ 0.17
XRCC3-211ENST00000555055 EPHB4P54760 987 aa16.08■□□□□ 0.17
XRCC3-211ENST00000555055 PSMC5P62195 406 aa16.08■□□□□ 0.17
XRCC3-211ENST00000555055 ZNF746Q6NUN9 644 aaPredicted RBP16.08■□□□□ 0.17
XRCC3-211ENST00000555055 B4GALNT4Q76KP1 1039 aa16.08■□□□□ 0.17
XRCC3-211ENST00000555055 CNPY4Q8N129 248 aa16.08■□□□□ 0.17
XRCC3-211ENST00000555055 RIN2Q8WYP3 895 aaPredicted RBP16.08■□□□□ 0.17
XRCC3-211ENST00000555055 CYP39A1Q9NYL5 469 aa16.08■□□□□ 0.17
XRCC3-211ENST00000555055 ADGRA3Q8IWK6 1321 aa16.08■□□□□ 0.16
XRCC3-211ENST00000555055 FOXN3O00409 490 aaPredicted RBP16.08■□□□□ 0.16
XRCC3-211ENST00000555055 ADSSP30520 456 aa16.08■□□□□ 0.16
XRCC3-211ENST00000555055 SLC20A1Q8WUM9 679 aa16.08■□□□□ 0.16
XRCC3-211ENST00000555055 AS3MTQ9HBK9 375 aa16.08■□□□□ 0.16
XRCC3-211ENST00000555055 SEPT9Q9UHD8 586 aaPredicted RBP16.08■□□□□ 0.16
XRCC3-211ENST00000555055 ZNF112Q9UJU3 913 aa16.08■□□□□ 0.16
XRCC3-211ENST00000555055 IGSF9BQ9UPX0 1349 aa16.08■□□□□ 0.16
XRCC3-211ENST00000555055 SRRM3A6NNA2 597 aaPredicted RBP16.07■□□□□ 0.16
XRCC3-211ENST00000555055 NPTX2P47972 431 aa16.07■□□□□ 0.16
XRCC3-211ENST00000555055 MAP2K1Q02750 393 aaPredicted RBP16.07■□□□□ 0.16
XRCC3-211ENST00000555055 VGLL4Q14135 290 aa16.07■□□□□ 0.16
XRCC3-211ENST00000555055 C1orf220Q5T0J3 134 aa16.07■□□□□ 0.16
XRCC3-211ENST00000555055 SEPT14Q6ZU15 432 aa16.07■□□□□ 0.16
XRCC3-211ENST00000555055 STXBP4Q6ZWJ1 553 aa16.07■□□□□ 0.16
XRCC3-211ENST00000555055 TACO1Q9BSH4 297 aaKnown RBP16.07■□□□□ 0.16
XRCC3-211ENST00000555055 UBE2TQ9NPD8 197 aaPredicted RBP16.07■□□□□ 0.16
XRCC3-211ENST00000555055 KCND2Q9NZV8 630 aa16.07■□□□□ 0.16
XRCC3-211ENST00000555055 PFASO15067 1338 aa16.07■□□□□ 0.16
XRCC3-211ENST00000555055 DENND3A2RUS2 1198 aa16.07■□□□□ 0.16
XRCC3-211ENST00000555055 KCNA2P16389 499 aa16.07■□□□□ 0.16
XRCC3-211ENST00000555055 CCND2P30279 289 aa16.07■□□□□ 0.16
XRCC3-211ENST00000555055 LMBRD2Q68DH5 695 aaPredicted RBP16.07■□□□□ 0.16
XRCC3-211ENST00000555055 CATSPERGQ6ZRH7 1159 aa16.07■□□□□ 0.16
XRCC3-211ENST00000555055 C1orf131Q8NDD1 294 aaKnown RBP16.07■□□□□ 0.16
XRCC3-211ENST00000555055 OLIG1Q8TAK6 271 aa16.07■□□□□ 0.16
XRCC3-211ENST00000555055 BCAS4Q8TDM0 211 aa16.07■□□□□ 0.16
XRCC3-211ENST00000555055 MOV10L1Q9BXT6 1211 aaKnown RBP16.07■□□□□ 0.16
XRCC3-211ENST00000555055 RLFQ13129 1914 aa16.07■□□□□ 0.16
XRCC3-211ENST00000555055 DOCK1Q14185 1865 aa16.06■□□□□ 0.16
XRCC3-211ENST00000555055 VAMP7P51809 220 aa16.06■□□□□ 0.16
XRCC3-211ENST00000555055 TRADDQ15628 312 aa16.06■□□□□ 0.16
XRCC3-211ENST00000555055 MTERF2Q49AM1 385 aa16.06■□□□□ 0.16
XRCC3-211ENST00000555055 NIPA1Q7RTP0 329 aa16.06■□□□□ 0.16
XRCC3-211ENST00000555055 YTHDF3Q7Z739 585 aaKnown RBP16.06■□□□□ 0.16
XRCC3-211ENST00000555055 C4orf19Q8IY42 314 aa16.06■□□□□ 0.16
XRCC3-211ENST00000555055 NEK9Q8TD19 979 aa16.06■□□□□ 0.16
XRCC3-211ENST00000555055 TMOD4Q9NZQ9 345 aa16.06■□□□□ 0.16
XRCC3-211ENST00000555055 DBR1Q9UK59 544 aaKnown RBP16.06■□□□□ 0.16
XRCC3-211ENST00000555055 PCDHA10Q9Y5I2 948 aa16.06■□□□□ 0.16
XRCC3-211ENST00000555055 KCNK3O14649 394 aa16.06■□□□□ 0.16
XRCC3-211ENST00000555055 USP2O75604 605 aaPredicted RBP16.06■□□□□ 0.16
XRCC3-211ENST00000555055 SOX5P35711 763 aa16.06■□□□□ 0.16
XRCC3-211ENST00000555055 STAT1P42224 750 aa16.06■□□□□ 0.16
XRCC3-211ENST00000555055 GHRHRQ02643 423 aa16.06■□□□□ 0.16
XRCC3-211ENST00000555055 GLE1Q53GS7 698 aaKnown RBP16.06■□□□□ 0.16
XRCC3-211ENST00000555055 LMO3Q8TAP4 145 aa16.06■□□□□ 0.16
XRCC3-211ENST00000555055 NSUN6Q8TEA1 469 aaKnown RBP16.06■□□□□ 0.16
XRCC3-211ENST00000555055 KAT2BQ92831 832 aa16.06■□□□□ 0.16
XRCC3-211ENST00000555055 ACCSQ96QU6 501 aa16.06■□□□□ 0.16
XRCC3-211ENST00000555055 TEX13BQ9BXU2 312 aa16.06■□□□□ 0.16
XRCC3-211ENST00000555055 APEX2Q9UBZ4 518 aa16.06■□□□□ 0.16
XRCC3-211ENST00000555055 CD2APQ9Y5K6 639 aa16.06■□□□□ 0.16
XRCC3-211ENST00000555055 KRT13P13646 458 aa16.05■□□□□ 0.16
XRCC3-211ENST00000555055 TCP1P17987 556 aaKnown RBP16.05■□□□□ 0.16
XRCC3-211ENST00000555055 MUTP22033 750 aa16.05■□□□□ 0.16
XRCC3-211ENST00000555055 GALCP54803 685 aa16.05■□□□□ 0.16
XRCC3-211ENST00000555055 GNGT1P63211 74 aa16.05■□□□□ 0.16
XRCC3-211ENST00000555055 APOBEC3FQ8IUX4 373 aaKnown RBP16.05■□□□□ 0.16
XRCC3-211ENST00000555055 CLMNQ96JQ2 1002 aa16.05■□□□□ 0.16
XRCC3-211ENST00000555055 JPH1Q9HDC5 661 aaPredicted RBP16.05■□□□□ 0.16
XRCC3-211ENST00000555055 GGA2Q9UJY4 613 aa16.05■□□□□ 0.16
XRCC3-211ENST00000555055 AFG3L2Q9Y4W6 797 aa16.05■□□□□ 0.16
XRCC3-211ENST00000555055 PARP14Q460N5 1801 aa16.05■□□□□ 0.16
XRCC3-211ENST00000555055 ANKRD65E5RJM6 399 aa16.05■□□□□ 0.16
XRCC3-211ENST00000555055 FSBPO95073 299 aa16.05■□□□□ 0.16
XRCC3-211ENST00000555055 DLATP10515 647 aaKnown RBP16.05■□□□□ 0.16
XRCC3-211ENST00000555055 ACTR2P61160 394 aa16.05■□□□□ 0.16
XRCC3-211ENST00000555055 KRT76Q01546 638 aa16.05■□□□□ 0.16
XRCC3-211ENST00000555055 ANKRD35Q8N283 1001 aa16.05■□□□□ 0.16
XRCC3-211ENST00000555055 XXYLT1Q8NBI6 393 aa16.05■□□□□ 0.16
XRCC3-211ENST00000555055 TMEM161BQ8NDZ6 487 aa16.05■□□□□ 0.16
XRCC3-211ENST00000555055 TMEM143Q96AN5 459 aa16.05■□□□□ 0.16
XRCC3-211ENST00000555055 INPP4AQ96PE3 977 aaPredicted RBP16.05■□□□□ 0.16
XRCC3-211ENST00000555055 MKNK1Q9BUB5 465 aa16.05■□□□□ 0.16
XRCC3-211ENST00000555055 ACAD9Q9H845 621 aa16.05■□□□□ 0.16
XRCC3-211ENST00000555055 PHIPQ8WWQ0 1821 aa16.04■□□□□ 0.16
XRCC3-211ENST00000555055 CNGA1P29973 690 aa16.04■□□□□ 0.16
XRCC3-211ENST00000555055 HNRNPH1P31943 449 aaKnown RBP16.04■□□□□ 0.16
XRCC3-211ENST00000555055 PRKCEQ02156 737 aa16.04■□□□□ 0.16
XRCC3-211ENST00000555055 MEI1Q5TIA1 1274 aa16.04■□□□□ 0.16
XRCC3-211ENST00000555055 SLC39A4Q6P5W5 647 aa16.04■□□□□ 0.16
XRCC3-211ENST00000555055 SND1Q7KZF4 910 aaKnown RBP eCLIP16.04■□□□□ 0.16
XRCC3-211ENST00000555055 KLHL7Q8IXQ5 586 aa16.04■□□□□ 0.16
XRCC3-211ENST00000555055 RNF10Q8N5U6 811 aaKnown RBP16.04■□□□□ 0.16
XRCC3-211ENST00000555055 SEMA4DQ92854 862 aa16.04■□□□□ 0.16
XRCC3-211ENST00000555055 ARHGEF26Q96DR7 871 aa16.04■□□□□ 0.16
XRCC3-211ENST00000555055 PI4K2AQ9BTU6 479 aa16.04■□□□□ 0.16
XRCC3-211ENST00000555055 KMT5AQ9NQR1 393 aa16.04■□□□□ 0.16
XRCC3-211ENST00000555055 BTBD7Q9P203 1132 aa16.04■□□□□ 0.16
XRCC3-211ENST00000555055 PCDHGC5Q9Y5F6 944 aa16.04■□□□□ 0.16
XRCC3-211ENST00000555055 SNCAIPQ9Y6H5 919 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms