RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 ERLIN2O94905 339 aa13.65□□□□□ -0.22
SYNE2-214ENST00000554928 STAG3L1P0CL83 205 aa13.65□□□□□ -0.22
SYNE2-214ENST00000554928 AFF1P51825 1210 aaKnown RBP13.65□□□□□ -0.22
SYNE2-214ENST00000554928 NT5DC1Q5TFE4 455 aa13.65□□□□□ -0.22
SYNE2-214ENST00000554928 EEF1DP3Q658K8 133 aa13.65□□□□□ -0.22
SYNE2-214ENST00000554928 LRRC55Q6ZSA7 311 aa13.65□□□□□ -0.22
SYNE2-214ENST00000554928 FIBCD1Q8N539 461 aa13.65□□□□□ -0.22
SYNE2-214ENST00000554928 SMG8Q8ND04 991 aaKnown RBP13.65□□□□□ -0.22
SYNE2-214ENST00000554928 DEPTORQ8TB45 409 aa13.65□□□□□ -0.22
SYNE2-214ENST00000554928 HELQQ8TDG4 1101 aa13.65□□□□□ -0.22
SYNE2-214ENST00000554928 LEO1Q8WVC0 666 aaPredicted RBP13.65□□□□□ -0.22
SYNE2-214ENST00000554928 LARP4BQ92615 738 aaKnown RBP13.65□□□□□ -0.22
SYNE2-214ENST00000554928 STAMQ92783 540 aa13.65□□□□□ -0.22
SYNE2-214ENST00000554928 TGS1Q96RS0 853 aaKnown RBP13.65□□□□□ -0.22
SYNE2-214ENST00000554928 ELAC1Q9H777 363 aaKnown RBP13.65□□□□□ -0.22
SYNE2-214ENST00000554928 GDPD2Q9HCC8 539 aa13.65□□□□□ -0.22
SYNE2-214ENST00000554928 HES2Q9Y543 173 aa13.65□□□□□ -0.22
SYNE2-214ENST00000554928 PCDHB2Q9Y5E7 798 aa13.65□□□□□ -0.22
SYNE2-214ENST00000554928 MYMKA6NI61 221 aa13.64□□□□□ -0.23
SYNE2-214ENST00000554928 B4GALT3O60512 393 aa13.64□□□□□ -0.23
SYNE2-214ENST00000554928 PRKCBP05771 671 aa13.64□□□□□ -0.23
SYNE2-214ENST00000554928 NCLP19338 710 aaKnown RBP13.64□□□□□ -0.23
SYNE2-214ENST00000554928 ME1P48163 572 aa13.64□□□□□ -0.23
SYNE2-214ENST00000554928 GIT2Q14161 759 aa13.64□□□□□ -0.23
SYNE2-214ENST00000554928 E2F4Q16254 413 aa13.64□□□□□ -0.23
SYNE2-214ENST00000554928 EPC2Q52LR7 807 aa13.64□□□□□ -0.23
SYNE2-214ENST00000554928 RRAGBQ5VZM2 374 aa13.64□□□□□ -0.23
SYNE2-214ENST00000554928 AGMOQ6ZNB7 445 aa13.64□□□□□ -0.23
SYNE2-214ENST00000554928 DYMQ7RTS9 669 aa13.64□□□□□ -0.23
SYNE2-214ENST00000554928 ZBTB8OSQ8IWT0 167 aa13.64□□□□□ -0.23
SYNE2-214ENST00000554928 TMEM192Q8IY95 271 aa13.64□□□□□ -0.23
SYNE2-214ENST00000554928 CMTR2Q8IYT2 770 aaKnown RBP13.64□□□□□ -0.23
SYNE2-214ENST00000554928 IFT74Q96LB3 600 aa13.64□□□□□ -0.23
SYNE2-214ENST00000554928 TRAIPQ9BWF2 469 aa13.64□□□□□ -0.23
SYNE2-214ENST00000554928 CWH43Q9H720 699 aa13.64□□□□□ -0.23
SYNE2-214ENST00000554928 DACT1Q9NYF0 836 aa13.64□□□□□ -0.23
SYNE2-214ENST00000554928 ARHGAP28Q9P2N2 729 aa13.64□□□□□ -0.23
SYNE2-214ENST00000554928 COL6A3P12111 3177 aa13.64□□□□□ -0.23
SYNE2-214ENST00000554928 ZNF623O75123 536 aa13.63□□□□□ -0.23
SYNE2-214ENST00000554928 NPTXRO95502 500 aa13.63□□□□□ -0.23
SYNE2-214ENST00000554928 PLS3P13797 630 aa13.63□□□□□ -0.23
SYNE2-214ENST00000554928 FOSL2P15408 326 aa13.63□□□□□ -0.23
SYNE2-214ENST00000554928 IGFBP4P22692 258 aa13.63□□□□□ -0.23
SYNE2-214ENST00000554928 PBX3P40426 434 aa13.63□□□□□ -0.23
SYNE2-214ENST00000554928 PPP2R5AQ15172 486 aa13.63□□□□□ -0.23
SYNE2-214ENST00000554928 FAM187BQ17R55 369 aa13.63□□□□□ -0.23
SYNE2-214ENST00000554928 TPRNQ4KMQ1 711 aa13.63□□□□□ -0.23
SYNE2-214ENST00000554928 ATL3Q6DD88 541 aa13.63□□□□□ -0.23
SYNE2-214ENST00000554928 MRPL10Q7Z7H8 261 aaKnown RBP13.63□□□□□ -0.23
SYNE2-214ENST00000554928 KCTD17Q8N5Z5 321 aa13.63□□□□□ -0.23
SYNE2-214ENST00000554928 KCNG4Q8TDN1 519 aa13.63□□□□□ -0.23
SYNE2-214ENST00000554928 CLP1Q92989 425 aaKnown RBP13.63□□□□□ -0.23
SYNE2-214ENST00000554928 DRC1Q96MC2 740 aa13.63□□□□□ -0.23
SYNE2-214ENST00000554928 FIZ1Q96SL8 496 aa13.63□□□□□ -0.23
SYNE2-214ENST00000554928 APOL6Q9BWW8 343 aa13.63□□□□□ -0.23
SYNE2-214ENST00000554928 C2orf40Q9H1Z8 148 aa13.63□□□□□ -0.23
SYNE2-214ENST00000554928 CXCL16Q9H2A7 254 aa13.63□□□□□ -0.23
SYNE2-214ENST00000554928 NXF3Q9H4D5 531 aaKnown RBP13.63□□□□□ -0.23
SYNE2-214ENST00000554928 PDZD7Q9H5P4 517 aa13.63□□□□□ -0.23
SYNE2-214ENST00000554928 KMT5AQ9NQR1 393 aa13.63□□□□□ -0.23
SYNE2-214ENST00000554928 TYW1Q9NV66 732 aaKnown RBP13.63□□□□□ -0.23
SYNE2-214ENST00000554928 CCDC39Q9UFE4 941 aa13.63□□□□□ -0.23
SYNE2-214ENST00000554928 STXBP5LQ9Y2K9 1186 aa13.63□□□□□ -0.23
SYNE2-214ENST00000554928 IPPQ9Y573 584 aa13.63□□□□□ -0.23
SYNE2-214ENST00000554928 CNTNAP2Q9UHC6 1331 aa13.63□□□□□ -0.23
SYNE2-214ENST00000554928 COL4A4P53420 1690 aaPredicted RBP13.63□□□□□ -0.23
SYNE2-214ENST00000554928 A0A1B0GUA9 196 aa13.62□□□□□ -0.23
SYNE2-214ENST00000554928 ACKR2O00590 384 aa13.62□□□□□ -0.23
SYNE2-214ENST00000554928 OFD1O75665 1012 aa13.62□□□□□ -0.23
SYNE2-214ENST00000554928 CTNNB1P35222 781 aa13.62□□□□□ -0.23
SYNE2-214ENST00000554928 TXLNAP40222 546 aa13.62□□□□□ -0.23
SYNE2-214ENST00000554928 STAT6P42226 847 aa13.62□□□□□ -0.23
SYNE2-214ENST00000554928 ZNF131P52739 623 aa13.62□□□□□ -0.23
SYNE2-214ENST00000554928 DMP1Q13316 513 aaPredicted RBP13.62□□□□□ -0.23
SYNE2-214ENST00000554928 PRPF4BQ13523 1007 aaKnown RBP13.62□□□□□ -0.23
SYNE2-214ENST00000554928 MAPK6Q16659 721 aa13.62□□□□□ -0.23
SYNE2-214ENST00000554928 RESP18Q5W5W9 173 aa13.62□□□□□ -0.23
SYNE2-214ENST00000554928 NOTUMQ6P988 496 aa13.62□□□□□ -0.23
SYNE2-214ENST00000554928 TMEM161BQ8NDZ6 487 aa13.62□□□□□ -0.23
SYNE2-214ENST00000554928 FBXO22Q8NEZ5 403 aa13.62□□□□□ -0.23
SYNE2-214ENST00000554928 DHX58Q96C10 678 aa13.62□□□□□ -0.23
SYNE2-214ENST00000554928 DNAJC19Q96DA6 116 aa13.62□□□□□ -0.23
SYNE2-214ENST00000554928 TIPINQ9BVW5 301 aa13.62□□□□□ -0.23
SYNE2-214ENST00000554928 TMEM117Q9H0C3 514 aa13.62□□□□□ -0.23
SYNE2-214ENST00000554928 PRMT7Q9NVM4 692 aaPredicted RBP13.62□□□□□ -0.23
SYNE2-214ENST00000554928 STK17AQ9UEE5 414 aa13.62□□□□□ -0.23
SYNE2-214ENST00000554928 CFAP45Q9UL16 551 aa13.62□□□□□ -0.23
SYNE2-214ENST00000554928 INPP5FQ9Y2H2 1132 aa13.62□□□□□ -0.23
SYNE2-214ENST00000554928 GRM6O15303 877 aa13.61□□□□□ -0.23
SYNE2-214ENST00000554928 CSPG5O95196 566 aa13.61□□□□□ -0.23
SYNE2-214ENST00000554928 EOMESO95936 686 aa13.61□□□□□ -0.23
SYNE2-214ENST00000554928 KRT18P05783 430 aaKnown RBP13.61□□□□□ -0.23
SYNE2-214ENST00000554928 MAPTP10636 758 aaKnown RBP13.61□□□□□ -0.23
SYNE2-214ENST00000554928 AKAP5P24588 427 aa13.61□□□□□ -0.23
SYNE2-214ENST00000554928 CASP1P29466 404 aa13.61□□□□□ -0.23
SYNE2-214ENST00000554928 NMT1P30419 496 aaKnown RBP13.61□□□□□ -0.23
SYNE2-214ENST00000554928 AXLP30530 894 aa13.61□□□□□ -0.23
SYNE2-214ENST00000554928 BMPR1AP36894 532 aa13.61□□□□□ -0.23
SYNE2-214ENST00000554928 RAB27AP51159 221 aa13.61□□□□□ -0.23
SYNE2-214ENST00000554928 KRT85P78386 507 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms