RNA–Protein interactions for RNA: ENST00000554731.1

RDH11-207, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 888 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-207ENST00000554731 FAM193BQ96PV7 902 aaPredicted RBP13.96□□□□□ -0.17
RDH11-207ENST00000554731 LARP6Q9BRS8 491 aaKnown RBP13.96□□□□□ -0.17
RDH11-207ENST00000554731 VN1R3Q9BXE9 311 aa13.96□□□□□ -0.17
RDH11-207ENST00000554731 EMILIN2Q9BXX0 1053 aa13.96□□□□□ -0.17
RDH11-207ENST00000554731 DHX33Q9H6R0 707 aaKnown RBP13.96□□□□□ -0.17
RDH11-207ENST00000554731 SFXN1Q9H9B4 322 aa13.96□□□□□ -0.17
RDH11-207ENST00000554731 RSAD1Q9HA92 442 aa13.96□□□□□ -0.17
RDH11-207ENST00000554731 KCNMB3Q9NPA1 279 aa13.96□□□□□ -0.17
RDH11-207ENST00000554731 KANSL3Q9P2N6 904 aa13.96□□□□□ -0.17
RDH11-207ENST00000554731 VAV3Q9UKW4 847 aa13.96□□□□□ -0.17
RDH11-207ENST00000554731 CNTNAP2Q9UHC6 1331 aa13.95□□□□□ -0.18
RDH11-207ENST00000554731 H0Y858 1186 aa13.95□□□□□ -0.18
RDH11-207ENST00000554731 B4GALT3O60512 393 aa13.95□□□□□ -0.18
RDH11-207ENST00000554731 SRGAP2CP0DJJ0 459 aa13.95□□□□□ -0.18
RDH11-207ENST00000554731 GCFC2P16383 781 aaKnown RBP13.95□□□□□ -0.18
RDH11-207ENST00000554731 KLRC2P26717 231 aa13.95□□□□□ -0.18
RDH11-207ENST00000554731 RFC5P40937 340 aa13.95□□□□□ -0.18
RDH11-207ENST00000554731 MRPL10Q7Z7H8 261 aaKnown RBP13.95□□□□□ -0.18
RDH11-207ENST00000554731 NEK8Q86SG6 692 aa13.95□□□□□ -0.18
RDH11-207ENST00000554731 ZNF579Q8NAF0 562 aaKnown RBP13.95□□□□□ -0.18
RDH11-207ENST00000554731 TMEM143Q96AN5 459 aa13.95□□□□□ -0.18
RDH11-207ENST00000554731 ACSF2Q96CM8 615 aaPredicted RBP13.95□□□□□ -0.18
RDH11-207ENST00000554731 TMEM175Q9BSA9 504 aa13.95□□□□□ -0.18
RDH11-207ENST00000554731 TM6SF1Q9BZW5 370 aa13.95□□□□□ -0.18
RDH11-207ENST00000554731 MFSD1Q9H3U5 465 aa13.95□□□□□ -0.18
RDH11-207ENST00000554731 SMOC2Q9H3U7 446 aa13.95□□□□□ -0.18
RDH11-207ENST00000554731 KCNJ14Q9UNX9 436 aa13.95□□□□□ -0.18
RDH11-207ENST00000554731 FAN1Q9Y2M0 1017 aa13.95□□□□□ -0.18
RDH11-207ENST00000554731 GAS2O43903 313 aaKnown RBP13.94□□□□□ -0.18
RDH11-207ENST00000554731 MARCH6O60337 910 aa13.94□□□□□ -0.18
RDH11-207ENST00000554731 CDKL5O76039 1030 aa13.94□□□□□ -0.18
RDH11-207ENST00000554731 DDHD2O94830 711 aa13.94□□□□□ -0.18
RDH11-207ENST00000554731 ALDH2P05091 517 aa13.94□□□□□ -0.18
RDH11-207ENST00000554731 SSBP05455 408 aaKnown RBP eCLIP13.94□□□□□ -0.18
RDH11-207ENST00000554731 XBP1P17861 261 aa13.94□□□□□ -0.18
RDH11-207ENST00000554731 HOXA11P31270 313 aaPredicted RBP13.94□□□□□ -0.18
RDH11-207ENST00000554731 LAMTOR4Q0VGL1 99 aa13.94□□□□□ -0.18
RDH11-207ENST00000554731 RIF1Q5UIP0 2472 aaKnown RBP13.94□□□□□ -0.18
RDH11-207ENST00000554731 ASTLQ6HA08 431 aaPredicted RBP13.94□□□□□ -0.18
RDH11-207ENST00000554731 PPP4R3AQ6IN85 833 aa13.94□□□□□ -0.18
RDH11-207ENST00000554731 CCDC149Q6ZUS6 474 aa13.94□□□□□ -0.18
RDH11-207ENST00000554731 OTUD6AQ7L8S5 288 aa13.94□□□□□ -0.18
RDH11-207ENST00000554731 OTOP3Q7RTS5 596 aa13.94□□□□□ -0.18
RDH11-207ENST00000554731 GPR149Q86SP6 731 aa13.94□□□□□ -0.18
RDH11-207ENST00000554731 C4orf19Q8IY42 314 aa13.94□□□□□ -0.18
RDH11-207ENST00000554731 TMEM105Q8N8V8 129 aa13.94□□□□□ -0.18
RDH11-207ENST00000554731 TCP11Q8WWU5 503 aa13.94□□□□□ -0.18
RDH11-207ENST00000554731 KLHL5Q96PQ7 755 aa13.94□□□□□ -0.18
RDH11-207ENST00000554731 NAP1L4Q99733 375 aaKnown RBP13.94□□□□□ -0.18
RDH11-207ENST00000554731 LXNQ9BS40 222 aa13.94□□□□□ -0.18
RDH11-207ENST00000554731 PHF20Q9BVI0 1012 aa13.94□□□□□ -0.18
RDH11-207ENST00000554731 MINDY3Q9H8M7 445 aa13.94□□□□□ -0.18
RDH11-207ENST00000554731 MRPL17Q9NRX2 175 aaKnown RBP13.94□□□□□ -0.18
RDH11-207ENST00000554731 WRAP73Q9P2S5 460 aaPredicted RBP13.94□□□□□ -0.18
RDH11-207ENST00000554731 TBX3O15119 743 aa13.93□□□□□ -0.18
RDH11-207ENST00000554731 ASAP2O43150 1006 aa13.93□□□□□ -0.18
RDH11-207ENST00000554731 CCNT1O60563 726 aaKnown RBP13.93□□□□□ -0.18
RDH11-207ENST00000554731 ERLIN2O94905 339 aa13.93□□□□□ -0.18
RDH11-207ENST00000554731 POMCP01189 267 aa13.93□□□□□ -0.18
RDH11-207ENST00000554731 URODP06132 367 aa13.93□□□□□ -0.18
RDH11-207ENST00000554731 CNPP09543 421 aaKnown RBP13.93□□□□□ -0.18
RDH11-207ENST00000554731 NCLP19338 710 aaKnown RBP13.93□□□□□ -0.18
RDH11-207ENST00000554731 YWHABP31946 246 aaKnown RBP13.93□□□□□ -0.18
RDH11-207ENST00000554731 CLCN4P51793 760 aa13.93□□□□□ -0.18
RDH11-207ENST00000554731 AFF1P51825 1210 aaKnown RBP13.93□□□□□ -0.18
RDH11-207ENST00000554731 MAPK8IP2Q13387 824 aaPredicted RBP13.93□□□□□ -0.18
RDH11-207ENST00000554731 EMC2Q15006 297 aa13.93□□□□□ -0.18
RDH11-207ENST00000554731 EPHA7Q15375 998 aa13.93□□□□□ -0.18
RDH11-207ENST00000554731 XKR9Q5GH70 373 aa13.93□□□□□ -0.18
RDH11-207ENST00000554731 UBXN11Q5T124 520 aa13.93□□□□□ -0.18
RDH11-207ENST00000554731 FERMT3Q86UX7 667 aa13.93□□□□□ -0.18
RDH11-207ENST00000554731 RNF149Q8NC42 400 aa13.93□□□□□ -0.18
RDH11-207ENST00000554731 CNNM3Q8NE01 707 aa13.93□□□□□ -0.18
RDH11-207ENST00000554731 UBN1Q9NPG3 1134 aa13.93□□□□□ -0.18
RDH11-207ENST00000554731 BMP2KQ9NSY1 1161 aaPredicted RBP13.93□□□□□ -0.18
RDH11-207ENST00000554731 PDRG1Q9NUG6 133 aa13.93□□□□□ -0.18
RDH11-207ENST00000554731 PROB1E7EW31 1015 aa13.92□□□□□ -0.18
RDH11-207ENST00000554731 NRP1O14786 923 aa13.92□□□□□ -0.18
RDH11-207ENST00000554731 LILRB3O75022 631 aa13.92□□□□□ -0.18
RDH11-207ENST00000554731 SOD2P04179 222 aa13.92□□□□□ -0.18
RDH11-207ENST00000554731 ITGA4P13612 1032 aa13.92□□□□□ -0.18
RDH11-207ENST00000554731 CLCN5P51795 746 aa13.92□□□□□ -0.18
RDH11-207ENST00000554731 NCAPH2Q6IBW4 605 aa13.92□□□□□ -0.18
RDH11-207ENST00000554731 ELMSAN1Q6PJG2 1045 aa13.92□□□□□ -0.18
RDH11-207ENST00000554731 C15orf39Q6ZRI6 1047 aa13.92□□□□□ -0.18
RDH11-207ENST00000554731 PIK3AP1Q6ZUJ8 805 aa13.92□□□□□ -0.18
RDH11-207ENST00000554731 FEZF2Q8TBJ5 459 aa13.92□□□□□ -0.18
RDH11-207ENST00000554731 HAS1Q92839 578 aa13.92□□□□□ -0.18
RDH11-207ENST00000554731 ZSWIM4Q9H7M6 989 aa13.92□□□□□ -0.18
RDH11-207ENST00000554731 RGL1Q9NZL6 768 aa13.92□□□□□ -0.18
RDH11-207ENST00000554731 SSX2IPQ9Y2D8 614 aa13.92□□□□□ -0.18
RDH11-207ENST00000554731 PRG3Q9Y2Y8 225 aaPredicted RBP13.92□□□□□ -0.18
RDH11-207ENST00000554731 STK36Q9NRP7 1315 aa13.91□□□□□ -0.18
RDH11-207ENST00000554731 C2CD2LO14523 706 aa13.91□□□□□ -0.18
RDH11-207ENST00000554731 BAG4O95429 457 aaKnown RBP13.91□□□□□ -0.18
RDH11-207ENST00000554731 ADH1AP07327 375 aa13.91□□□□□ -0.18
RDH11-207ENST00000554731 AXLP30530 894 aa13.91□□□□□ -0.18
RDH11-207ENST00000554731 AK2P54819 239 aa13.91□□□□□ -0.18
RDH11-207ENST00000554731 NCBP1Q09161 790 aaKnown RBP13.91□□□□□ -0.18
RDH11-207ENST00000554731 TDGQ13569 410 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms