RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 MTUS1Q9ULD2 1270 aa5.72□□□□□ -1.49
ATXN3-229ENST00000554672 SLC4A4Q9Y6R1 1079 aa5.72□□□□□ -1.49
ATXN3-229ENST00000554672 TCF20Q9UGU0 1960 aaKnown RBP5.72□□□□□ -1.49
ATXN3-229ENST00000554672 MYO9BQ13459 2157 aa5.72□□□□□ -1.49
ATXN3-229ENST00000554672 PRRC2BQ5JSZ5 2229 aaKnown RBP5.71□□□□□ -1.49
ATXN3-229ENST00000554672 PLXNA1Q9UIW2 1896 aa5.71□□□□□ -1.5
ATXN3-229ENST00000554672 IGKV6D-41A0A0C4DH26 115 aa5.71□□□□□ -1.5
ATXN3-229ENST00000554672 RBM47A0AV96 593 aaKnown RBP5.71□□□□□ -1.5
ATXN3-229ENST00000554672 TMEM232C9JQI7 657 aa5.71□□□□□ -1.5
ATXN3-229ENST00000554672 H3BQ06 376 aaPredicted RBP5.71□□□□□ -1.5
ATXN3-229ENST00000554672 NKRFO15226 690 aaKnown RBP eCLIP5.71□□□□□ -1.5
ATXN3-229ENST00000554672 NCK2O43639 380 aa5.71□□□□□ -1.5
ATXN3-229ENST00000554672 PLA2G6O60733 806 aa5.71□□□□□ -1.5
ATXN3-229ENST00000554672 TTLL1O95922 423 aa5.71□□□□□ -1.5
ATXN3-229ENST00000554672 ALAS1P13196 640 aa5.71□□□□□ -1.5
ATXN3-229ENST00000554672 ZP2Q05996 745 aa5.71□□□□□ -1.5
ATXN3-229ENST00000554672 RING1Q06587 406 aa5.71□□□□□ -1.5
ATXN3-229ENST00000554672 GPNMBQ14956 572 aa5.71□□□□□ -1.5
ATXN3-229ENST00000554672 PLCL1Q15111 1095 aa5.71□□□□□ -1.5
ATXN3-229ENST00000554672 PTGISQ16647 500 aa5.71□□□□□ -1.5
ATXN3-229ENST00000554672 SBK1Q52WX2 424 aa5.71□□□□□ -1.5
ATXN3-229ENST00000554672 CNKSR3Q6P9H4 555 aa5.71□□□□□ -1.5
ATXN3-229ENST00000554672 GIMAP6Q6P9H5 292 aa5.71□□□□□ -1.5
ATXN3-229ENST00000554672 BMP8AQ7Z5Y6 402 aa5.71□□□□□ -1.5
ATXN3-229ENST00000554672 FAM160B2Q86V87 743 aa5.71□□□□□ -1.5
ATXN3-229ENST00000554672 ADHFE1Q8IWW8 467 aa5.71□□□□□ -1.5
ATXN3-229ENST00000554672 FBXO16Q8IX29 292 aaPredicted RBP5.71□□□□□ -1.5
ATXN3-229ENST00000554672 STK11IPQ8N1F8 1099 aa5.71□□□□□ -1.5
ATXN3-229ENST00000554672 LRRC47Q8N1G4 583 aaKnown RBP5.71□□□□□ -1.5
ATXN3-229ENST00000554672 CLASRPQ8N2M8 674 aaKnown RBP5.71□□□□□ -1.5
ATXN3-229ENST00000554672 GMCL1P1Q8NEA9 526 aa5.71□□□□□ -1.5
ATXN3-229ENST00000554672 PABPC5Q96DU9 382 aaKnown RBP5.71□□□□□ -1.5
ATXN3-229ENST00000554672 MRPL38Q96DV4 380 aaKnown RBP5.71□□□□□ -1.5
ATXN3-229ENST00000554672 ASIC4Q96FT7 647 aa5.71□□□□□ -1.5
ATXN3-229ENST00000554672 EMILIN2Q9BXX0 1053 aa5.71□□□□□ -1.5
ATXN3-229ENST00000554672 PAG1Q9NWQ8 432 aa5.71□□□□□ -1.5
ATXN3-229ENST00000554672 MTMR4Q9NYA4 1195 aa5.71□□□□□ -1.5
ATXN3-229ENST00000554672 CYP39A1Q9NYL5 469 aa5.71□□□□□ -1.5
ATXN3-229ENST00000554672 ARPP21Q9UBL0 812 aaPredicted RBP5.71□□□□□ -1.5
ATXN3-229ENST00000554672 ADAMTS6Q9UKP5 1117 aa5.71□□□□□ -1.5
ATXN3-229ENST00000554672 TNNQ9UQP3 1299 aa5.71□□□□□ -1.5
ATXN3-229ENST00000554672 INSL6Q9Y581 213 aa5.71□□□□□ -1.5
ATXN3-229ENST00000554672 RAD50Q92878 1312 aa5.71□□□□□ -1.5
ATXN3-229ENST00000554672 XIRP2A4UGR9 3374 aa5.7□□□□□ -1.5
ATXN3-229ENST00000554672 MINDY4BA8MYZ0 360 aa5.7□□□□□ -1.5
ATXN3-229ENST00000554672 FBXO24O75426 580 aa5.7□□□□□ -1.5
ATXN3-229ENST00000554672 CXCL10P02778 98 aa5.7□□□□□ -1.5
ATXN3-229ENST00000554672 IFIT2P09913 472 aaKnown RBP5.7□□□□□ -1.5
ATXN3-229ENST00000554672 FUT4P22083 530 aa5.7□□□□□ -1.5
ATXN3-229ENST00000554672 STAT2P52630 851 aa5.7□□□□□ -1.5
ATXN3-229ENST00000554672 TIGD5Q53EQ6 642 aa5.7□□□□□ -1.5
ATXN3-229ENST00000554672 HERC4Q5GLZ8 1057 aaPredicted RBP5.7□□□□□ -1.5
ATXN3-229ENST00000554672 PPM1JQ5JR12 505 aa5.7□□□□□ -1.5
ATXN3-229ENST00000554672 ZKSCAN2Q63HK3 967 aa5.7□□□□□ -1.5
ATXN3-229ENST00000554672 ZSCAN25Q6NSZ9 544 aa5.7□□□□□ -1.5
ATXN3-229ENST00000554672 NSMFQ6X4W1 530 aa5.7□□□□□ -1.5
ATXN3-229ENST00000554672 TMCO2Q7Z6W1 182 aaPredicted RBP5.7□□□□□ -1.5
ATXN3-229ENST00000554672 TOP6BLQ8N6T0 577 aa5.7□□□□□ -1.5
ATXN3-229ENST00000554672 OR6J1Q8NGC5 347 aa5.7□□□□□ -1.5
ATXN3-229ENST00000554672 EDAQ92838 391 aa5.7□□□□□ -1.5
ATXN3-229ENST00000554672 MISP3Q96FF7 219 aa5.7□□□□□ -1.5
ATXN3-229ENST00000554672 CEP95Q96GE4 821 aa5.7□□□□□ -1.5
ATXN3-229ENST00000554672 SAMD11Q96NU1 681 aa5.7□□□□□ -1.5
ATXN3-229ENST00000554672 MPHOSPH6Q99547 160 aaKnown RBP5.7□□□□□ -1.5
ATXN3-229ENST00000554672 IRF2BPLQ9H1B7 796 aa5.7□□□□□ -1.5
ATXN3-229ENST00000554672 CBX8Q9HC52 389 aa5.7□□□□□ -1.5
ATXN3-229ENST00000554672 IL1RAPL2Q9NP60 686 aa5.7□□□□□ -1.5
ATXN3-229ENST00000554672 MBNL3Q9NUK0 354 aaKnown RBP5.7□□□□□ -1.5
ATXN3-229ENST00000554672 VAV3Q9UKW4 847 aa5.7□□□□□ -1.5
ATXN3-229ENST00000554672 EXOC6BQ9Y2D4 811 aa5.7□□□□□ -1.5
ATXN3-229ENST00000554672 DDX49Q9Y6V7 483 aaKnown RBP5.7□□□□□ -1.5
ATXN3-229ENST00000554672 ZBED9Q6R2W3 1325 aa5.7□□□□□ -1.5
ATXN3-229ENST00000554672 A0A0G2JMZ2 1700 aa5.69□□□□□ -1.5
ATXN3-229ENST00000554672 H3BNC9 293 aa5.69□□□□□ -1.5
ATXN3-229ENST00000554672 NBNO60934 754 aa5.69□□□□□ -1.5
ATXN3-229ENST00000554672 RNASE1P07998 156 aaKnown RBP5.69□□□□□ -1.5
ATXN3-229ENST00000554672 ATP5JP18859 108 aa5.69□□□□□ -1.5
ATXN3-229ENST00000554672 MCCP23508 829 aa5.69□□□□□ -1.5
ATXN3-229ENST00000554672 SLC1A4P43007 532 aa5.69□□□□□ -1.5
ATXN3-229ENST00000554672 MAPK8P45983 427 aa5.69□□□□□ -1.5
ATXN3-229ENST00000554672 ALDH5A1P51649 535 aaPredicted RBP5.69□□□□□ -1.5
ATXN3-229ENST00000554672 DEFB103AP81534 67 aa5.69□□□□□ -1.5
ATXN3-229ENST00000554672 PRKCQQ04759 706 aa5.69□□□□□ -1.5
ATXN3-229ENST00000554672 RBL2Q08999 1139 aa5.69□□□□□ -1.5
ATXN3-229ENST00000554672 IKQ13123 557 aaPredicted RBP5.69□□□□□ -1.5
ATXN3-229ENST00000554672 GPM6BQ13491 265 aa5.69□□□□□ -1.5
ATXN3-229ENST00000554672 BAATQ14032 418 aaPredicted RBP5.69□□□□□ -1.5
ATXN3-229ENST00000554672 EPC2Q52LR7 807 aa5.69□□□□□ -1.5
ATXN3-229ENST00000554672 MUM1L1Q5H9M0 696 aa5.69□□□□□ -1.5
ATXN3-229ENST00000554672 RCSD1Q6JBY9 416 aa5.69□□□□□ -1.5
ATXN3-229ENST00000554672 CEP85Q6P2H3 762 aa5.69□□□□□ -1.5
ATXN3-229ENST00000554672 EP400NLQ6ZTU2 488 aa5.69□□□□□ -1.5
ATXN3-229ENST00000554672 LRRC8DQ7L1W4 858 aa5.69□□□□□ -1.5
ATXN3-229ENST00000554672 SESTD1Q86VW0 696 aa5.69□□□□□ -1.5
ATXN3-229ENST00000554672 C12orf40Q86WS4 652 aa5.69□□□□□ -1.5
ATXN3-229ENST00000554672 POU5F2Q8N7G0 328 aa5.69□□□□□ -1.5
ATXN3-229ENST00000554672 PRSS33Q8NF86 280 aa5.69□□□□□ -1.5
ATXN3-229ENST00000554672 SCFD2Q8WU76 684 aa5.69□□□□□ -1.5
ATXN3-229ENST00000554672 ANKS1AQ92625 1134 aa5.69□□□□□ -1.5
ATXN3-229ENST00000554672 KIF1BPQ96EK5 621 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms