RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 CD276Q5ZPR3 534 aa6.35□□□□□ -1.39
MTHFD1-206ENST00000554353 LDHDQ86WU2 507 aa6.35□□□□□ -1.39
MTHFD1-206ENST00000554353 TRMT2AQ8IZ69 625 aaKnown RBP6.35□□□□□ -1.39
MTHFD1-206ENST00000554353 ASB15Q8WXK1 588 aa6.35□□□□□ -1.39
MTHFD1-206ENST00000554353 RTF1Q92541 710 aaKnown RBP6.35□□□□□ -1.39
MTHFD1-206ENST00000554353 AHCYL2Q96HN2 611 aaKnown RBP6.35□□□□□ -1.39
MTHFD1-206ENST00000554353 PDGFDQ9GZP0 370 aaPredicted RBP6.35□□□□□ -1.39
MTHFD1-206ENST00000554353 ZMAT4Q9H898 229 aa6.35□□□□□ -1.39
MTHFD1-206ENST00000554353 FAM53CQ9NYF3 392 aa6.35□□□□□ -1.39
MTHFD1-206ENST00000554353 LMO7Q8WWI1 1683 aa6.35□□□□□ -1.39
MTHFD1-206ENST00000554353 SSH2Q76I76 1423 aa6.34□□□□□ -1.39
MTHFD1-206ENST00000554353 CPDO75976 1380 aa6.34□□□□□ -1.39
MTHFD1-206ENST00000554353 PARP4Q9UKK3 1724 aaKnown RBP6.34□□□□□ -1.39
MTHFD1-206ENST00000554353 RREB1Q92766 1687 aa6.34□□□□□ -1.39
MTHFD1-206ENST00000554353 PRAMEF22A3QJZ6 481 aa6.34□□□□□ -1.39
MTHFD1-206ENST00000554353 LCHNA4D1U4 455 aa6.34□□□□□ -1.39
MTHFD1-206ENST00000554353 PRC1O43663 620 aa6.34□□□□□ -1.39
MTHFD1-206ENST00000554353 GCP02774 474 aa6.34□□□□□ -1.39
MTHFD1-206ENST00000554353 TAL1P17542 331 aaPredicted RBP6.34□□□□□ -1.39
MTHFD1-206ENST00000554353 FNTBP49356 437 aa6.34□□□□□ -1.39
MTHFD1-206ENST00000554353 CDR1P51861 262 aa6.34□□□□□ -1.39
MTHFD1-206ENST00000554353 HERVK_113P62684 666 aa6.34□□□□□ -1.39
MTHFD1-206ENST00000554353 PHC1P78364 1004 aa6.34□□□□□ -1.39
MTHFD1-206ENST00000554353 SLFN5Q08AF3 891 aa6.34□□□□□ -1.39
MTHFD1-206ENST00000554353 TARBP2Q15633 366 aaKnown RBP6.34□□□□□ -1.39
MTHFD1-206ENST00000554353 PRAMEF18Q5VWM3 479 aa6.34□□□□□ -1.39
MTHFD1-206ENST00000554353 TMC5Q6UXY8 1006 aa6.34□□□□□ -1.39
MTHFD1-206ENST00000554353 ZZZ3Q8IYH5 903 aa6.34□□□□□ -1.39
MTHFD1-206ENST00000554353 TCP11L2Q8N4U5 519 aa6.34□□□□□ -1.39
MTHFD1-206ENST00000554353 ZNF610Q8N9Z0 462 aa6.34□□□□□ -1.39
MTHFD1-206ENST00000554353 CAMKK2Q96RR4 588 aa6.34□□□□□ -1.39
MTHFD1-206ENST00000554353 SGPP1Q9BX95 441 aa6.34□□□□□ -1.39
MTHFD1-206ENST00000554353 MCOLN1Q9GZU1 580 aa6.34□□□□□ -1.39
MTHFD1-206ENST00000554353 CNTD2Q9H8S5 307 aa6.34□□□□□ -1.39
MTHFD1-206ENST00000554353 SLC39A2Q9NP94 309 aa6.34□□□□□ -1.39
MTHFD1-206ENST00000554353 TRHDEQ9UKU6 1024 aa6.34□□□□□ -1.39
MTHFD1-206ENST00000554353 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.34□□□□□ -1.39
MTHFD1-206ENST00000554353 AKAP12Q02952 1782 aa6.34□□□□□ -1.4
MTHFD1-206ENST00000554353 DISP2A7MBM2 1401 aa6.33□□□□□ -1.4
MTHFD1-206ENST00000554353 NSD3Q9BZ95 1437 aa6.33□□□□□ -1.4
MTHFD1-206ENST00000554353 USP19O94966 1318 aa6.33□□□□□ -1.4
MTHFD1-206ENST00000554353 PEX10O60683 326 aa6.33□□□□□ -1.4
MTHFD1-206ENST00000554353 C8BP07358 591 aa6.33□□□□□ -1.4
MTHFD1-206ENST00000554353 ENO2P09104 434 aaPredicted RBP6.33□□□□□ -1.4
MTHFD1-206ENST00000554353 AOAHP28039 575 aa6.33□□□□□ -1.4
MTHFD1-206ENST00000554353 MC4RP32245 332 aa6.33□□□□□ -1.4
MTHFD1-206ENST00000554353 RHBDL3P58872 404 aa6.33□□□□□ -1.4
MTHFD1-206ENST00000554353 CACNB2Q08289 660 aaPredicted RBP6.33□□□□□ -1.4
MTHFD1-206ENST00000554353 FAPQ12884 760 aa6.33□□□□□ -1.4
MTHFD1-206ENST00000554353 LRRC32Q14392 662 aa6.33□□□□□ -1.4
MTHFD1-206ENST00000554353 WDR43Q15061 677 aaKnown RBP eCLIP6.33□□□□□ -1.4
MTHFD1-206ENST00000554353 EPHA7Q15375 998 aa6.33□□□□□ -1.4
MTHFD1-206ENST00000554353 VASNQ6EMK4 673 aa6.33□□□□□ -1.4
MTHFD1-206ENST00000554353 TSHZ1Q6ZSZ6 1077 aa6.33□□□□□ -1.4
MTHFD1-206ENST00000554353 RASSF3Q86WH2 238 aa6.33□□□□□ -1.4
MTHFD1-206ENST00000554353 CNPY4Q8N129 248 aa6.33□□□□□ -1.4
MTHFD1-206ENST00000554353 TSR2Q969E8 191 aaKnown RBP6.33□□□□□ -1.4
MTHFD1-206ENST00000554353 C16orf92Q96LL3 132 aa6.33□□□□□ -1.4
MTHFD1-206ENST00000554353 SYT3Q9BQG1 590 aa6.33□□□□□ -1.4
MTHFD1-206ENST00000554353 ASPSCR1Q9BZE9 553 aa6.33□□□□□ -1.4
MTHFD1-206ENST00000554353 SLC12A5Q9H2X9 1139 aa6.33□□□□□ -1.4
MTHFD1-206ENST00000554353 NGRNQ9NPE2 291 aaKnown RBP6.33□□□□□ -1.4
MTHFD1-206ENST00000554353 TOPORSQ9NS56 1045 aaPredicted RBP6.33□□□□□ -1.4
MTHFD1-206ENST00000554353 C14orf119Q9NWQ9 140 aa6.33□□□□□ -1.4
MTHFD1-206ENST00000554353 UCKL1Q9NWZ5 548 aa6.33□□□□□ -1.4
MTHFD1-206ENST00000554353 MBD1Q9UIS9 605 aaPredicted RBP6.33□□□□□ -1.4
MTHFD1-206ENST00000554353 MSRAQ9UJ68 235 aa6.33□□□□□ -1.4
MTHFD1-206ENST00000554353 COL18A1P39060 1754 aa6.33□□□□□ -1.4
MTHFD1-206ENST00000554353 NUP188Q5SRE5 1749 aa6.33□□□□□ -1.4
MTHFD1-206ENST00000554353 PIK3C2AO00443 1686 aa6.33□□□□□ -1.4
MTHFD1-206ENST00000554353 WNK3Q9BYP7 1800 aa6.32□□□□□ -1.4
MTHFD1-206ENST00000554353 TEX51A0A1B0GUA7 166 aa6.32□□□□□ -1.4
MTHFD1-206ENST00000554353 UBA6A0AVT1 1052 aaPredicted RBP6.32□□□□□ -1.4
MTHFD1-206ENST00000554353 PLIN1O60240 522 aa6.32□□□□□ -1.4
MTHFD1-206ENST00000554353 KDM1AO60341 852 aa6.32□□□□□ -1.4
MTHFD1-206ENST00000554353 APOL3O95236 402 aa6.32□□□□□ -1.4
MTHFD1-206ENST00000554353 CYP2C8P10632 490 aa6.32□□□□□ -1.4
MTHFD1-206ENST00000554353 ATF2P15336 505 aa6.32□□□□□ -1.4
MTHFD1-206ENST00000554353 PFKLP17858 780 aa6.32□□□□□ -1.4
MTHFD1-206ENST00000554353 FBLN1P23142 703 aa6.32□□□□□ -1.4
MTHFD1-206ENST00000554353 PTGS1P23219 599 aa6.32□□□□□ -1.4
MTHFD1-206ENST00000554353 PAX3P23760 479 aa6.32□□□□□ -1.4
MTHFD1-206ENST00000554353 EPHB3P54753 998 aa6.32□□□□□ -1.4
MTHFD1-206ENST00000554353 SCAND1P57086 179 aa6.32□□□□□ -1.4
MTHFD1-206ENST00000554353 PFKPQ01813 784 aa6.32□□□□□ -1.4
MTHFD1-206ENST00000554353 BIRC2Q13490 618 aa6.32□□□□□ -1.4
MTHFD1-206ENST00000554353 GPR158Q5T848 1215 aa6.32□□□□□ -1.4
MTHFD1-206ENST00000554353 SYDE2Q5VT97 1194 aa6.32□□□□□ -1.4
MTHFD1-206ENST00000554353 WDR78Q5VTH9 848 aa6.32□□□□□ -1.4
MTHFD1-206ENST00000554353 LIPIQ6XZB0 460 aa6.32□□□□□ -1.4
MTHFD1-206ENST00000554353 FRMD7Q6ZUT3 714 aa6.32□□□□□ -1.4
MTHFD1-206ENST00000554353 STK32CQ86UX6 486 aa6.32□□□□□ -1.4
MTHFD1-206ENST00000554353 NME9Q86XW9 330 aa6.32□□□□□ -1.4
MTHFD1-206ENST00000554353 CILP2Q8IUL8 1156 aa6.32□□□□□ -1.4
MTHFD1-206ENST00000554353 C7orf31Q8N865 590 aa6.32□□□□□ -1.4
MTHFD1-206ENST00000554353 SMARCC2Q8TAQ2 1214 aa6.32□□□□□ -1.4
MTHFD1-206ENST00000554353 MZB1Q8WU39 189 aa6.32□□□□□ -1.4
MTHFD1-206ENST00000554353 CPA5Q8WXQ8 436 aa6.32□□□□□ -1.4
MTHFD1-206ENST00000554353 TUBGCP5Q96RT8 1024 aa6.32□□□□□ -1.4
MTHFD1-206ENST00000554353 ZDHHC5Q9C0B5 715 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms