RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 RSAD1Q9HA92 442 aa20.92■□□□□ 0.94
CPSF2-203ENST00000554290 STK39Q9UEW8 545 aa20.92■□□□□ 0.94
CPSF2-203ENST00000554290 IRAK3Q9Y616 596 aa20.92■□□□□ 0.94
CPSF2-203ENST00000554290 CNTNAP2Q9UHC6 1331 aa20.92■□□□□ 0.94
CPSF2-203ENST00000554290 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.91■□□□□ 0.94
CPSF2-203ENST00000554290 BTBD18B2RXH4 712 aa20.91■□□□□ 0.94
CPSF2-203ENST00000554290 ZBTB39O15060 712 aa20.91■□□□□ 0.94
CPSF2-203ENST00000554290 LYPLA2O95372 231 aa20.91■□□□□ 0.94
CPSF2-203ENST00000554290 LARGE1O95461 756 aa20.91■□□□□ 0.94
CPSF2-203ENST00000554290 HOXA11P31270 313 aaPredicted RBP20.91■□□□□ 0.94
CPSF2-203ENST00000554290 TFDP1Q14186 410 aa20.91■□□□□ 0.94
CPSF2-203ENST00000554290 AGMOQ6ZNB7 445 aa20.91■□□□□ 0.94
CPSF2-203ENST00000554290 BMP8AQ7Z5Y6 402 aa20.91■□□□□ 0.94
CPSF2-203ENST00000554290 DIS3L2Q8IYB7 885 aaKnown RBP20.91■□□□□ 0.94
CPSF2-203ENST00000554290 CCDC43Q96MW1 224 aaKnown RBP20.91■□□□□ 0.94
CPSF2-203ENST00000554290 FAM193BQ96PV7 902 aaPredicted RBP20.91■□□□□ 0.94
CPSF2-203ENST00000554290 HSD17B14Q9BPX1 270 aa20.91■□□□□ 0.94
CPSF2-203ENST00000554290 ZBP1Q9H171 429 aa20.91■□□□□ 0.94
CPSF2-203ENST00000554290 UBN1Q9NPG3 1134 aa20.91■□□□□ 0.94
CPSF2-203ENST00000554290 ANKEF1Q9NU02 776 aa20.91■□□□□ 0.94
CPSF2-203ENST00000554290 C5orf42Q9H799 3197 aa20.91■□□□□ 0.94
CPSF2-203ENST00000554290 TMEM221A6NGB7 291 aa20.9■□□□□ 0.94
CPSF2-203ENST00000554290 M0R296 226 aa20.9■□□□□ 0.94
CPSF2-203ENST00000554290 NEMFO60524 1076 aa20.9■□□□□ 0.94
CPSF2-203ENST00000554290 CTSAP10619 480 aa20.9■□□□□ 0.94
CPSF2-203ENST00000554290 AXLP30530 894 aa20.9■□□□□ 0.94
CPSF2-203ENST00000554290 SLC11A1P49279 550 aa20.9■□□□□ 0.94
CPSF2-203ENST00000554290 POU5F1BQ06416 359 aa20.9■□□□□ 0.94
CPSF2-203ENST00000554290 TMEM173Q86WV6 379 aaPredicted RBP20.9■□□□□ 0.94
CPSF2-203ENST00000554290 PBXIP1Q96AQ6 731 aa20.9■□□□□ 0.94
CPSF2-203ENST00000554290 NECTIN4Q96NY8 510 aa20.9■□□□□ 0.94
CPSF2-203ENST00000554290 ADAM7Q9H2U9 754 aa20.9■□□□□ 0.94
CPSF2-203ENST00000554290 DNAJB4Q9UDY4 337 aa20.9■□□□□ 0.94
CPSF2-203ENST00000554290 NR2E1Q9Y466 385 aa20.9■□□□□ 0.94
CPSF2-203ENST00000554290 DGAT1O75907 488 aa20.89■□□□□ 0.93
CPSF2-203ENST00000554290 ALDH2P05091 517 aa20.89■□□□□ 0.93
CPSF2-203ENST00000554290 NCLP19338 710 aaKnown RBP20.89■□□□□ 0.93
CPSF2-203ENST00000554290 TXKP42681 527 aa20.89■□□□□ 0.93
CPSF2-203ENST00000554290 PTENP60484 403 aa20.89■□□□□ 0.93
CPSF2-203ENST00000554290 UBXN11Q5T124 520 aa20.89■□□□□ 0.93
CPSF2-203ENST00000554290 ZNF280BQ86YH2 543 aa20.89■□□□□ 0.93
CPSF2-203ENST00000554290 DZANK1Q9NVP4 752 aa20.89■□□□□ 0.93
CPSF2-203ENST00000554290 JAK2O60674 1132 aa20.88■□□□□ 0.93
CPSF2-203ENST00000554290 ITGA4P13612 1032 aa20.88■□□□□ 0.93
CPSF2-203ENST00000554290 MTHFRP42898 656 aa20.88■□□□□ 0.93
CPSF2-203ENST00000554290 FOSBP53539 338 aa20.88■□□□□ 0.93
CPSF2-203ENST00000554290 NOTUMQ6P988 496 aa20.88■□□□□ 0.93
CPSF2-203ENST00000554290 ZBTB33Q86T24 672 aa20.88■□□□□ 0.93
CPSF2-203ENST00000554290 PPFIBP1Q86W92 1011 aa20.88■□□□□ 0.93
CPSF2-203ENST00000554290 BCL7CQ8WUZ0 217 aaPredicted RBP20.88■□□□□ 0.93
CPSF2-203ENST00000554290 AUTS2Q8WXX7 1259 aa20.88■□□□□ 0.93
CPSF2-203ENST00000554290 CCDC51Q96ER9 411 aa20.88■□□□□ 0.93
CPSF2-203ENST00000554290 RIPOR3Q96MK2 946 aa20.88■□□□□ 0.93
CPSF2-203ENST00000554290 TMEM175Q9BSA9 504 aa20.88■□□□□ 0.93
CPSF2-203ENST00000554290 XPNPEP1Q9NQW7 623 aa20.88■□□□□ 0.93
CPSF2-203ENST00000554290 FAN1Q9Y2M0 1017 aa20.88■□□□□ 0.93
CPSF2-203ENST00000554290 INO80B-WBP1J3KQ70 363 aa20.87■□□□□ 0.93
CPSF2-203ENST00000554290 DDHD2O94830 711 aa20.87■□□□□ 0.93
CPSF2-203ENST00000554290 XRCC6P12956 609 aaKnown RBP eCLIP20.87■□□□□ 0.93
CPSF2-203ENST00000554290 SIGLEC14Q08ET2 396 aa20.87■□□□□ 0.93
CPSF2-203ENST00000554290 SAFBQ15424 915 aaKnown RBP eCLIP20.87■□□□□ 0.93
CPSF2-203ENST00000554290 PTPN21Q16825 1174 aa20.87■□□□□ 0.93
CPSF2-203ENST00000554290 IFNLR1Q8IU57 520 aaPredicted RBP20.87■□□□□ 0.93
CPSF2-203ENST00000554290 FBXL18Q96ME1 805 aa20.87■□□□□ 0.93
CPSF2-203ENST00000554290 MTMR9Q96QG7 549 aa20.87■□□□□ 0.93
CPSF2-203ENST00000554290 EMILIN2Q9BXX0 1053 aa20.87■□□□□ 0.93
CPSF2-203ENST00000554290 TSHZ2Q9NRE2 1034 aa20.87■□□□□ 0.93
CPSF2-203ENST00000554290 TSPAN1O60635 241 aa20.86■□□□□ 0.93
CPSF2-203ENST00000554290 POMCP01189 267 aa20.86■□□□□ 0.93
CPSF2-203ENST00000554290 SP100P23497 879 aaPredicted RBP20.86■□□□□ 0.93
CPSF2-203ENST00000554290 AFF1P51825 1210 aaKnown RBP20.86■□□□□ 0.93
CPSF2-203ENST00000554290 RARS2Q5T160 578 aaKnown RBP20.86■□□□□ 0.93
CPSF2-203ENST00000554290 SUGP1Q8IWZ8 645 aaKnown RBP20.86■□□□□ 0.93
CPSF2-203ENST00000554290 SMG8Q8ND04 991 aaKnown RBP20.86■□□□□ 0.93
CPSF2-203ENST00000554290 SLC22A17Q8WUG5 538 aa20.86■□□□□ 0.93
CPSF2-203ENST00000554290 CSRNP2Q9H175 543 aa20.86■□□□□ 0.93
CPSF2-203ENST00000554290 NRP1O14786 923 aa20.85■□□□□ 0.93
CPSF2-203ENST00000554290 B4GALT3O60512 393 aa20.85■□□□□ 0.93
CPSF2-203ENST00000554290 ARL2P36404 184 aa20.85■□□□□ 0.93
CPSF2-203ENST00000554290 RARRES1P49788 294 aa20.85■□□□□ 0.93
CPSF2-203ENST00000554290 CAPSQ13938 189 aa20.85■□□□□ 0.93
CPSF2-203ENST00000554290 ATAT1Q5SQI0 421 aa20.85■□□□□ 0.93
CPSF2-203ENST00000554290 CABP7Q86V35 215 aa20.85■□□□□ 0.93
CPSF2-203ENST00000554290 HACE1Q8IYU2 909 aa20.85■□□□□ 0.93
CPSF2-203ENST00000554290 ASAP3Q8TDY4 903 aa20.85■□□□□ 0.93
CPSF2-203ENST00000554290 NFKBIZQ9BYH8 718 aa20.85■□□□□ 0.93
CPSF2-203ENST00000554290 TRIM6Q9C030 488 aaPredicted RBP20.85■□□□□ 0.93
CPSF2-203ENST00000554290 POMKQ9H5K3 350 aa20.85■□□□□ 0.93
CPSF2-203ENST00000554290 IPPQ9Y573 584 aa20.85■□□□□ 0.93
CPSF2-203ENST00000554290 WNT7AO00755 349 aa20.84■□□□□ 0.93
CPSF2-203ENST00000554290 NR1I2O75469 434 aa20.84■□□□□ 0.93
CPSF2-203ENST00000554290 EPCAMP16422 314 aa20.84■□□□□ 0.93
CPSF2-203ENST00000554290 ATP2B1P20020 1258 aa20.84■□□□□ 0.93
CPSF2-203ENST00000554290 KLRC2P26717 231 aa20.84■□□□□ 0.93
CPSF2-203ENST00000554290 MCM7P33993 719 aa20.84■□□□□ 0.93
CPSF2-203ENST00000554290 MBTD1Q05BQ5 628 aa20.84■□□□□ 0.93
CPSF2-203ENST00000554290 PTPN14Q15678 1187 aa20.84■□□□□ 0.93
CPSF2-203ENST00000554290 FBXL6Q8N531 539 aa20.84■□□□□ 0.93
CPSF2-203ENST00000554290 C12orf76Q8N812 135 aaPredicted RBP20.84■□□□□ 0.93
CPSF2-203ENST00000554290 PIGOQ8TEQ8 1089 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms