RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 KCNJ12Q14500 433 aa11.46□□□□□ -0.57
TMEM55B-205ENST00000554028 MTFR1Q15390 333 aa11.46□□□□□ -0.57
TMEM55B-205ENST00000554028 CCDC40Q4G0X9 1142 aa11.46□□□□□ -0.57
TMEM55B-205ENST00000554028 ZCWPW2Q504Y3 356 aa11.46□□□□□ -0.57
TMEM55B-205ENST00000554028 CDKAL1Q5VV42 579 aa11.46□□□□□ -0.57
TMEM55B-205ENST00000554028 ARMCX5Q6P1M9 558 aa11.46□□□□□ -0.57
TMEM55B-205ENST00000554028 SARM1Q6SZW1 724 aa11.46□□□□□ -0.57
TMEM55B-205ENST00000554028 DNAJB3Q8WWF6 145 aa11.46□□□□□ -0.57
TMEM55B-205ENST00000554028 ZBTB10Q96DT7 871 aa11.46□□□□□ -0.57
TMEM55B-205ENST00000554028 MED15Q96RN5 788 aa11.46□□□□□ -0.57
TMEM55B-205ENST00000554028 MRPL4Q9BYD3 311 aaKnown RBP11.46□□□□□ -0.57
TMEM55B-205ENST00000554028 METTL14Q9HCE5 456 aaKnown RBP11.46□□□□□ -0.57
TMEM55B-205ENST00000554028 AGPAT3Q9NRZ7 376 aa11.46□□□□□ -0.57
TMEM55B-205ENST00000554028 PRMT7Q9NVM4 692 aaPredicted RBP11.46□□□□□ -0.57
TMEM55B-205ENST00000554028 OGDHLQ9ULD0 1010 aa11.46□□□□□ -0.57
TMEM55B-205ENST00000554028 PHF24Q9UPV7 400 aa11.46□□□□□ -0.57
TMEM55B-205ENST00000554028 MYH9P35579 1960 aaKnown RBP11.46□□□□□ -0.58
TMEM55B-205ENST00000554028 PCNTO95613 3336 aa11.45□□□□□ -0.58
TMEM55B-205ENST00000554028 A0A087WZ62 844 aa11.45□□□□□ -0.58
TMEM55B-205ENST00000554028 A0A1W2PQ45 241 aaPredicted RBP11.45□□□□□ -0.58
TMEM55B-205ENST00000554028 A0A1W2PQY0 241 aa11.45□□□□□ -0.58
TMEM55B-205ENST00000554028 PES1O00541 588 aaKnown RBP11.45□□□□□ -0.58
TMEM55B-205ENST00000554028 ACKR2O00590 384 aa11.45□□□□□ -0.58
TMEM55B-205ENST00000554028 CLIC2O15247 247 aa11.45□□□□□ -0.58
TMEM55B-205ENST00000554028 SLC16A3O15427 465 aaKnown RBP11.45□□□□□ -0.58
TMEM55B-205ENST00000554028 TGFB1I1O43294 461 aa11.45□□□□□ -0.58
TMEM55B-205ENST00000554028 EXOC3O60645 756 aa11.45□□□□□ -0.58
TMEM55B-205ENST00000554028 ERLIN2O94905 339 aa11.45□□□□□ -0.58
TMEM55B-205ENST00000554028 PRKCBP05771 671 aa11.45□□□□□ -0.58
TMEM55B-205ENST00000554028 GJB1P08034 283 aa11.45□□□□□ -0.58
TMEM55B-205ENST00000554028 ZNF18P17022 549 aa11.45□□□□□ -0.58
TMEM55B-205ENST00000554028 GARTP22102 1010 aa11.45□□□□□ -0.58
TMEM55B-205ENST00000554028 HOXC8P31273 242 aa11.45□□□□□ -0.58
TMEM55B-205ENST00000554028 HOXD13P35453 343 aa11.45□□□□□ -0.58
TMEM55B-205ENST00000554028 PSMC2P35998 433 aaKnown RBP11.45□□□□□ -0.58
TMEM55B-205ENST00000554028 GPC3P51654 580 aa11.45□□□□□ -0.58
TMEM55B-205ENST00000554028 UBASH3AP57075 661 aa11.45□□□□□ -0.58
TMEM55B-205ENST00000554028 ZNF200P98182 395 aaPredicted RBP11.45□□□□□ -0.58
TMEM55B-205ENST00000554028 PRPF4BQ13523 1007 aaKnown RBP11.45□□□□□ -0.58
TMEM55B-205ENST00000554028 PCBP1Q15365 356 aaKnown RBP eCLIP11.45□□□□□ -0.58
TMEM55B-205ENST00000554028 PTGISQ16647 500 aa11.45□□□□□ -0.58
TMEM55B-205ENST00000554028 HSP90AA4PQ58FG1 418 aa11.45□□□□□ -0.58
TMEM55B-205ENST00000554028 TCP11X2Q5H9J9 407 aa11.45□□□□□ -0.58
TMEM55B-205ENST00000554028 CEP135Q66GS9 1140 aa11.45□□□□□ -0.58
TMEM55B-205ENST00000554028 CDCA2Q69YH5 1023 aaPredicted RBP11.45□□□□□ -0.58
TMEM55B-205ENST00000554028 GDF6Q6KF10 455 aaPredicted RBP11.45□□□□□ -0.58
TMEM55B-205ENST00000554028 ZPBP2Q6X784 338 aa11.45□□□□□ -0.58
TMEM55B-205ENST00000554028 APBB1IPQ7Z5R6 666 aaPredicted RBP11.45□□□□□ -0.58
TMEM55B-205ENST00000554028 IFNLR1Q8IU57 520 aaPredicted RBP11.45□□□□□ -0.58
TMEM55B-205ENST00000554028 SLC9A9Q8IVB4 645 aa11.45□□□□□ -0.58
TMEM55B-205ENST00000554028 TNS4Q8IZW8 715 aa11.45□□□□□ -0.58
TMEM55B-205ENST00000554028 PPP1R13LQ8WUF5 828 aa11.45□□□□□ -0.58
TMEM55B-205ENST00000554028 POMGNT1Q8WZA1 660 aa11.45□□□□□ -0.58
TMEM55B-205ENST00000554028 ARMC5Q96C12 935 aa11.45□□□□□ -0.58
TMEM55B-205ENST00000554028 ZNF333Q96JL9 665 aa11.45□□□□□ -0.58
TMEM55B-205ENST00000554028 FDXACB1Q9BRP7 624 aaPredicted RBP11.45□□□□□ -0.58
TMEM55B-205ENST00000554028 TCHPQ9BT92 498 aa11.45□□□□□ -0.58
TMEM55B-205ENST00000554028 TMEM106CQ9BVX2 250 aa11.45□□□□□ -0.58
TMEM55B-205ENST00000554028 KIAA1586Q9HCI6 787 aa11.45□□□□□ -0.58
TMEM55B-205ENST00000554028 GINS2Q9Y248 185 aa11.45□□□□□ -0.58
TMEM55B-205ENST00000554028 ADGRA3Q8IWK6 1321 aa11.44□□□□□ -0.58
TMEM55B-205ENST00000554028 ARVCFO00192 962 aa11.44□□□□□ -0.58
TMEM55B-205ENST00000554028 SGPL1O95470 568 aa11.44□□□□□ -0.58
TMEM55B-205ENST00000554028 ADCY5O95622 1261 aa11.44□□□□□ -0.58
TMEM55B-205ENST00000554028 LDHAP00338 332 aaKnown RBP11.44□□□□□ -0.58
TMEM55B-205ENST00000554028 PIGRP01833 764 aa11.44□□□□□ -0.58
TMEM55B-205ENST00000554028 ATP1A3P13637 1013 aa11.44□□□□□ -0.58
TMEM55B-205ENST00000554028 KRT13P13646 458 aa11.44□□□□□ -0.58
TMEM55B-205ENST00000554028 PRKCSHP14314 528 aaPredicted RBP11.44□□□□□ -0.58
TMEM55B-205ENST00000554028 CYP2J2P51589 502 aa11.44□□□□□ -0.58
TMEM55B-205ENST00000554028 CRYBB1P53674 252 aaPredicted RBP11.44□□□□□ -0.58
TMEM55B-205ENST00000554028 PPP2R3AQ06190 1150 aa11.44□□□□□ -0.58
TMEM55B-205ENST00000554028 PTK7Q13308 1070 aa11.44□□□□□ -0.58
TMEM55B-205ENST00000554028 KIZQ2M2Z5 673 aa11.44□□□□□ -0.58
TMEM55B-205ENST00000554028 MAMSTRQ6ZN01 415 aa11.44□□□□□ -0.58
TMEM55B-205ENST00000554028 RUFY4Q6ZNE9 571 aa11.44□□□□□ -0.58
TMEM55B-205ENST00000554028 FRMD5Q7Z6J6 570 aa11.44□□□□□ -0.58
TMEM55B-205ENST00000554028 USP37Q86T82 979 aa11.44□□□□□ -0.58
TMEM55B-205ENST00000554028 SERINC5Q86VE9 423 aa11.44□□□□□ -0.58
TMEM55B-205ENST00000554028 C12orf56Q8IXR9 622 aa11.44□□□□□ -0.58
TMEM55B-205ENST00000554028 DRC7Q8IY82 874 aa11.44□□□□□ -0.58
TMEM55B-205ENST00000554028 XXYLT1Q8NBI6 393 aa11.44□□□□□ -0.58
TMEM55B-205ENST00000554028 ZNF668Q96K58 619 aaPredicted RBP11.44□□□□□ -0.58
TMEM55B-205ENST00000554028 CNOT6LQ96LI5 555 aaKnown RBP11.44□□□□□ -0.58
TMEM55B-205ENST00000554028 PRIMPOLQ96LW4 560 aa11.44□□□□□ -0.58
TMEM55B-205ENST00000554028 MKNK1Q9BUB5 465 aa11.44□□□□□ -0.58
TMEM55B-205ENST00000554028 FZD8Q9H461 694 aa11.44□□□□□ -0.58
TMEM55B-205ENST00000554028 PRDM10Q9NQV6 1147 aa11.44□□□□□ -0.58
TMEM55B-205ENST00000554028 IFNKQ9P0W0 207 aa11.44□□□□□ -0.58
TMEM55B-205ENST00000554028 ARMCX3Q9UH62 379 aaPredicted RBP11.44□□□□□ -0.58
TMEM55B-205ENST00000554028 LIMA1Q9UHB6 759 aaKnown RBP11.44□□□□□ -0.58
TMEM55B-205ENST00000554028 LRRC10BA6NIK2 292 aa11.43□□□□□ -0.58
TMEM55B-205ENST00000554028 GOLGA6L6A8MZA4 724 aa11.43□□□□□ -0.58
TMEM55B-205ENST00000554028 N4BP3O15049 544 aa11.43□□□□□ -0.58
TMEM55B-205ENST00000554028 TLR3O15455 904 aaKnown RBP11.43□□□□□ -0.58
TMEM55B-205ENST00000554028 CLDN3O15551 220 aa11.43□□□□□ -0.58
TMEM55B-205ENST00000554028 TOM1L1O75674 476 aa11.43□□□□□ -0.58
TMEM55B-205ENST00000554028 SFPQP23246 707 aaKnown RBP eCLIP11.43□□□□□ -0.58
TMEM55B-205ENST00000554028 MRPS6P82932 125 aaKnown RBP11.43□□□□□ -0.58
TMEM55B-205ENST00000554028 MBTD1Q05BQ5 628 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms