RNA–Protein interactions for RNA: ENST00000553938.5

SPTB-206, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best)

Gene SPTB, Length 3,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-206ENST00000553938 MGARPQ8TDB4 240 aa13.07□□□□□ -0.32
SPTB-206ENST00000553938 ACTRT1Q8TDG2 376 aa13.07□□□□□ -0.32
SPTB-206ENST00000553938 SELENOSQ9BQE4 189 aa13.07□□□□□ -0.32
SPTB-206ENST00000553938 ADAM7Q9H2U9 754 aa13.07□□□□□ -0.32
SPTB-206ENST00000553938 FBXO28Q9NVF7 368 aa13.07□□□□□ -0.32
SPTB-206ENST00000553938 TPX2Q9ULW0 747 aaKnown RBP13.07□□□□□ -0.32
SPTB-206ENST00000553938 RABGAP1Q9Y3P9 1069 aa13.07□□□□□ -0.32
SPTB-206ENST00000553938 PLIN4Q96Q06 1357 aa13.07□□□□□ -0.32
SPTB-206ENST00000553938 TESPA1A2RU30 521 aaPredicted RBP13.07□□□□□ -0.32
SPTB-206ENST00000553938 TRAPPC3O43617 180 aa13.07□□□□□ -0.32
SPTB-206ENST00000553938 ARP10275 920 aa13.07□□□□□ -0.32
SPTB-206ENST00000553938 RPA1P27694 616 aa13.07□□□□□ -0.32
SPTB-206ENST00000553938 ICA1Q05084 483 aa13.07□□□□□ -0.32
SPTB-206ENST00000553938 TRIP13Q15645 432 aaPredicted RBP13.07□□□□□ -0.32
SPTB-206ENST00000553938 SLC5A9Q2M3M2 681 aa13.07□□□□□ -0.32
SPTB-206ENST00000553938 DRAXINQ8NBI3 349 aaPredicted RBP13.07□□□□□ -0.32
SPTB-206ENST00000553938 SLC30A5Q8TAD4 765 aa13.07□□□□□ -0.32
SPTB-206ENST00000553938 GLIS2Q9BZE0 524 aaPredicted RBP13.07□□□□□ -0.32
SPTB-206ENST00000553938 KDM4CQ9H3R0 1056 aa13.07□□□□□ -0.32
SPTB-206ENST00000553938 AZI2Q9H6S1 392 aa13.07□□□□□ -0.32
SPTB-206ENST00000553938 LTBP4Q8N2S1 1624 aa13.07□□□□□ -0.32
SPTB-206ENST00000553938 KDM3AQ9Y4C1 1321 aa13.07□□□□□ -0.32
SPTB-206ENST00000553938 SMARCA1P28370 1054 aa13.07□□□□□ -0.32
SPTB-206ENST00000553938 SOX10P56693 466 aa13.07□□□□□ -0.32
SPTB-206ENST00000553938 LAMB3Q13751 1172 aa13.07□□□□□ -0.32
SPTB-206ENST00000553938 EDRF1Q3B7T1 1238 aa13.07□□□□□ -0.32
SPTB-206ENST00000553938 GNPTABQ3T906 1256 aa13.07□□□□□ -0.32
SPTB-206ENST00000553938 CERKLQ49MI3 558 aaPredicted RBP13.07□□□□□ -0.32
SPTB-206ENST00000553938 ZDHHC24Q6UX98 284 aa13.07□□□□□ -0.32
SPTB-206ENST00000553938 CCDC25Q86WR0 208 aa13.07□□□□□ -0.32
SPTB-206ENST00000553938 RSRC1Q96IZ7 334 aaKnown RBP13.07□□□□□ -0.32
SPTB-206ENST00000553938 SEC16BQ96JE7 1060 aa13.07□□□□□ -0.32
SPTB-206ENST00000553938 HERPUD2Q9BSE4 406 aa13.07□□□□□ -0.32
SPTB-206ENST00000553938 DDX23Q9BUQ8 820 aaKnown RBP13.07□□□□□ -0.32
SPTB-206ENST00000553938 KIFC3Q9BVG8 833 aa13.07□□□□□ -0.32
SPTB-206ENST00000553938 EDEM3Q9BZQ6 932 aa13.07□□□□□ -0.32
SPTB-206ENST00000553938 TDRD3Q9H7E2 651 aaKnown RBP13.07□□□□□ -0.32
SPTB-206ENST00000553938 TSKSQ9UJT2 592 aa13.07□□□□□ -0.32
SPTB-206ENST00000553938 A0A1B0GVG6 124 aa13.06□□□□□ -0.32
SPTB-206ENST00000553938 PPEF1O14829 653 aaPredicted RBP13.06□□□□□ -0.32
SPTB-206ENST00000553938 RASSF9O75901 435 aa13.06□□□□□ -0.32
SPTB-206ENST00000553938 GCLMP48507 274 aa13.06□□□□□ -0.32
SPTB-206ENST00000553938 MYO1EQ12965 1108 aa13.06□□□□□ -0.32
SPTB-206ENST00000553938 SLC29A2Q14542 456 aa13.06□□□□□ -0.32
SPTB-206ENST00000553938 SLFN11Q7Z7L1 901 aa13.06□□□□□ -0.32
SPTB-206ENST00000553938 MYLK4Q86YV6 388 aaPredicted RBP13.06□□□□□ -0.32
SPTB-206ENST00000553938 CD302Q8IX05 232 aa13.06□□□□□ -0.32
SPTB-206ENST00000553938 SPIRE2Q8WWL2 714 aa13.06□□□□□ -0.32
SPTB-206ENST00000553938 CRAMP1Q96RY5 1269 aa13.06□□□□□ -0.32
SPTB-206ENST00000553938 PCDHB18PQ96TA0 734 aa13.06□□□□□ -0.32
SPTB-206ENST00000553938 CBWD1Q9BRT8 395 aa13.06□□□□□ -0.32
SPTB-206ENST00000553938 CCDC113Q9H0I3 377 aa13.06□□□□□ -0.32
SPTB-206ENST00000553938 GPRC5CQ9NQ84 441 aa13.06□□□□□ -0.32
SPTB-206ENST00000553938 CD2APQ9Y5K6 639 aa13.06□□□□□ -0.32
SPTB-206ENST00000553938 ANKRD62A6NC57 917 aa13.06□□□□□ -0.32
SPTB-206ENST00000553938 O00370 1275 aa13.06□□□□□ -0.32
SPTB-206ENST00000553938 FLOT1O75955 427 aa13.06□□□□□ -0.32
SPTB-206ENST00000553938 ZNF76P36508 570 aa13.06□□□□□ -0.32
SPTB-206ENST00000553938 CRKP46108 304 aa13.06□□□□□ -0.32
SPTB-206ENST00000553938 RPL21P46778 160 aaKnown RBP13.06□□□□□ -0.32
SPTB-206ENST00000553938 FMO5P49326 533 aa13.06□□□□□ -0.32
SPTB-206ENST00000553938 SMTNP53814 917 aa13.06□□□□□ -0.32
SPTB-206ENST00000553938 PPP3CAQ08209 521 aa13.06□□□□□ -0.32
SPTB-206ENST00000553938 CYB5D1Q6P9G0 228 aa13.06□□□□□ -0.32
SPTB-206ENST00000553938 FRMD5Q7Z6J6 570 aa13.06□□□□□ -0.32
SPTB-206ENST00000553938 CCDC97Q96F63 343 aaPredicted RBP13.06□□□□□ -0.32
SPTB-206ENST00000553938 CHCHD3Q9NX63 227 aaKnown RBP13.06□□□□□ -0.32
SPTB-206ENST00000553938 TELO2Q9Y4R8 837 aa13.06□□□□□ -0.32
SPTB-206ENST00000553938 RPTORQ8N122 1335 aa13.06□□□□□ -0.32
SPTB-206ENST00000553938 IGLV3-22A0A075B6J6 115 aa13.05□□□□□ -0.32
SPTB-206ENST00000553938 GMNCA6NCL1 334 aa13.05□□□□□ -0.32
SPTB-206ENST00000553938 HMGB1P1B2RPK0 211 aaPredicted RBP13.05□□□□□ -0.32
SPTB-206ENST00000553938 SORBS3O60504 671 aa13.05□□□□□ -0.32
SPTB-206ENST00000553938 TBCAO75347 108 aaKnown RBP13.05□□□□□ -0.32
SPTB-206ENST00000553938 CHN1P15882 459 aa13.05□□□□□ -0.32
SPTB-206ENST00000553938 PPP2R2AP63151 447 aa13.05□□□□□ -0.32
SPTB-206ENST00000553938 MFSD4BQ5TF39 518 aa13.05□□□□□ -0.32
SPTB-206ENST00000553938 SCARA3Q6AZY7 606 aa13.05□□□□□ -0.32
SPTB-206ENST00000553938 EZH1Q92800 747 aaPredicted RBP13.05□□□□□ -0.32
SPTB-206ENST00000553938 TOPORSQ9NS56 1045 aaPredicted RBP13.05□□□□□ -0.32
SPTB-206ENST00000553938 ZDHHC18Q9NUE0 388 aa13.05□□□□□ -0.32
SPTB-206ENST00000553938 TYW1Q9NV66 732 aaKnown RBP13.05□□□□□ -0.32
SPTB-206ENST00000553938 BHMG1C9JSJ3 638 aaPredicted RBP13.05□□□□□ -0.32
SPTB-206ENST00000553938 ABCD1P33897 745 aa13.05□□□□□ -0.32
SPTB-206ENST00000553938 SOX5P35711 763 aa13.05□□□□□ -0.32
SPTB-206ENST00000553938 MESDQ14696 234 aa13.05□□□□□ -0.32
SPTB-206ENST00000553938 DAW1Q8N136 415 aa13.05□□□□□ -0.32
SPTB-206ENST00000553938 NSMCE1Q8WV22 266 aa13.05□□□□□ -0.32
SPTB-206ENST00000553938 ATG4AQ8WYN0 398 aa13.05□□□□□ -0.32
SPTB-206ENST00000553938 DHX38Q92620 1227 aaKnown RBP13.05□□□□□ -0.32
SPTB-206ENST00000553938 WDR70Q9NW82 654 aa13.05□□□□□ -0.32
SPTB-206ENST00000553938 SUGT1Q9Y2Z0 365 aa13.05□□□□□ -0.32
SPTB-206ENST00000553938 VPS41P49754 854 aa13.05□□□□□ -0.32
SPTB-206ENST00000553938 SCNN1BP51168 640 aa13.05□□□□□ -0.32
SPTB-206ENST00000553938 PPATQ06203 517 aa13.05□□□□□ -0.32
SPTB-206ENST00000553938 IFFO1Q0D2I5 559 aa13.05□□□□□ -0.32
SPTB-206ENST00000553938 PDCD2Q16342 344 aaPredicted RBP13.05□□□□□ -0.32
SPTB-206ENST00000553938 GPATCH4Q5T3I0 446 aaKnown RBP13.05□□□□□ -0.32
SPTB-206ENST00000553938 ANKRD23Q86SG2 305 aa13.05□□□□□ -0.32
SPTB-206ENST00000553938 B4GALNT2Q8NHY0 566 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms