RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 NECAB1Q8N987 351 aa13.25□□□□□ -0.29
SRP54-203ENST00000553544 GTF3C6Q969F1 213 aa13.25□□□□□ -0.29
SRP54-203ENST00000553544 RMDN1Q96DB5 314 aa13.25□□□□□ -0.29
SRP54-203ENST00000553544 KLHL5Q96PQ7 755 aa13.25□□□□□ -0.29
SRP54-203ENST00000553544 INO80BQ9C086 356 aaPredicted RBP13.25□□□□□ -0.29
SRP54-203ENST00000553544 NRDE2Q9H7Z3 1164 aa13.25□□□□□ -0.29
SRP54-203ENST00000553544 GJB4Q9NTQ9 266 aa13.25□□□□□ -0.29
SRP54-203ENST00000553544 TBC1D13Q9NVG8 400 aa13.25□□□□□ -0.29
SRP54-203ENST00000553544 ORC3Q9UBD5 711 aaPredicted RBP13.25□□□□□ -0.29
SRP54-203ENST00000553544 DMXL1Q9Y485 3027 aa13.24□□□□□ -0.29
SRP54-203ENST00000553544 WDR64B1ANS9 1081 aa13.24□□□□□ -0.29
SRP54-203ENST00000553544 CSDE1O75534 798 aaKnown RBP13.24□□□□□ -0.29
SRP54-203ENST00000553544 OFD1O75665 1012 aa13.24□□□□□ -0.29
SRP54-203ENST00000553544 PSMD10O75832 226 aa13.24□□□□□ -0.29
SRP54-203ENST00000553544 TDP2O95551 362 aa13.24□□□□□ -0.29
SRP54-203ENST00000553544 OATP04181 439 aa13.24□□□□□ -0.29
SRP54-203ENST00000553544 DNM2P50570 870 aa13.24□□□□□ -0.29
SRP54-203ENST00000553544 CLCN4P51793 760 aa13.24□□□□□ -0.29
SRP54-203ENST00000553544 TBC1D8BQ0IIM8 1120 aa13.24□□□□□ -0.29
SRP54-203ENST00000553544 PUM1Q14671 1186 aaKnown RBP eCLIP13.24□□□□□ -0.29
SRP54-203ENST00000553544 PTPN14Q15678 1187 aa13.24□□□□□ -0.29
SRP54-203ENST00000553544 LONRF3Q496Y0 759 aa13.24□□□□□ -0.29
SRP54-203ENST00000553544 C8orf34Q49A92 452 aa13.24□□□□□ -0.29
SRP54-203ENST00000553544 TWF2Q6IBS0 349 aaKnown RBP13.24□□□□□ -0.29
SRP54-203ENST00000553544 CYP26C1Q6V0L0 522 aa13.24□□□□□ -0.29
SRP54-203ENST00000553544 KRT25Q7Z3Z0 450 aa13.24□□□□□ -0.29
SRP54-203ENST00000553544 LPPQ93052 612 aa13.24□□□□□ -0.29
SRP54-203ENST00000553544 NXPE3Q969Y0 559 aa13.24□□□□□ -0.29
SRP54-203ENST00000553544 GBP3Q9H0R5 595 aa13.24□□□□□ -0.29
SRP54-203ENST00000553544 DISC1Q9NRI5 854 aa13.24□□□□□ -0.29
SRP54-203ENST00000553544 MRPL17Q9NRX2 175 aaKnown RBP13.24□□□□□ -0.29
SRP54-203ENST00000553544 DPP7Q9UHL4 492 aa13.24□□□□□ -0.29
SRP54-203ENST00000553544 INPP5FQ9Y2H2 1132 aa13.24□□□□□ -0.29
SRP54-203ENST00000553544 MED19A0JLT2 244 aaPredicted RBP13.23□□□□□ -0.29
SRP54-203ENST00000553544 NARSO43776 548 aaKnown RBP13.23□□□□□ -0.29
SRP54-203ENST00000553544 ZNF862O60290 1169 aa13.23□□□□□ -0.29
SRP54-203ENST00000553544 ZNF623O75123 536 aa13.23□□□□□ -0.29
SRP54-203ENST00000553544 CFHP08603 1231 aa13.23□□□□□ -0.29
SRP54-203ENST00000553544 CNPP09543 421 aaKnown RBP13.23□□□□□ -0.29
SRP54-203ENST00000553544 XBP1P17861 261 aa13.23□□□□□ -0.29
SRP54-203ENST00000553544 SFPQP23246 707 aaKnown RBP eCLIP13.23□□□□□ -0.29
SRP54-203ENST00000553544 GBP2P32456 591 aaPredicted RBP13.23□□□□□ -0.29
SRP54-203ENST00000553544 SLC11A1P49279 550 aa13.23□□□□□ -0.29
SRP54-203ENST00000553544 ST3GAL1Q11201 340 aa13.23□□□□□ -0.29
SRP54-203ENST00000553544 INF2Q27J81 1249 aa13.23□□□□□ -0.29
SRP54-203ENST00000553544 LRCH2Q5VUJ6 765 aa13.23□□□□□ -0.29
SRP54-203ENST00000553544 ELMSAN1Q6PJG2 1045 aa13.23□□□□□ -0.29
SRP54-203ENST00000553544 ZC3H14Q6PJT7 736 aaKnown RBP13.23□□□□□ -0.29
SRP54-203ENST00000553544 SLC44A3Q8N4M1 653 aa13.23□□□□□ -0.29
SRP54-203ENST00000553544 NSUN7Q8NE18 718 aaKnown RBP13.23□□□□□ -0.29
SRP54-203ENST00000553544 CMASQ8NFW8 434 aaPredicted RBP13.23□□□□□ -0.29
SRP54-203ENST00000553544 ETNPPLQ8TBG4 499 aa13.23□□□□□ -0.29
SRP54-203ENST00000553544 FEZF2Q8TBJ5 459 aa13.23□□□□□ -0.29
SRP54-203ENST00000553544 OXER1Q8TDS5 423 aa13.23□□□□□ -0.29
SRP54-203ENST00000553544 WASF1Q92558 559 aa13.23□□□□□ -0.29
SRP54-203ENST00000553544 STAMQ92783 540 aa13.23□□□□□ -0.29
SRP54-203ENST00000553544 GJA10Q969M2 543 aa13.23□□□□□ -0.29
SRP54-203ENST00000553544 PGBD4Q96DM1 585 aa13.23□□□□□ -0.29
SRP54-203ENST00000553544 KIF2CQ99661 725 aa13.23□□□□□ -0.29
SRP54-203ENST00000553544 HINFPQ9BQA5 517 aa13.23□□□□□ -0.29
SRP54-203ENST00000553544 TEKT3Q9BXF9 490 aa13.23□□□□□ -0.29
SRP54-203ENST00000553544 SSX2IPQ9Y2D8 614 aa13.23□□□□□ -0.29
SRP54-203ENST00000553544 FAN1Q9Y2M0 1017 aa13.23□□□□□ -0.29
SRP54-203ENST00000553544 R4GN57 208 aa13.23□□□□□ -0.29
SRP54-203ENST00000553544 CCDC195A0A1B0GUA6 201 aa13.22□□□□□ -0.29
SRP54-203ENST00000553544 KRBA1A5PL33 1030 aa13.22□□□□□ -0.29
SRP54-203ENST00000553544 GAS7O60861 476 aa13.22□□□□□ -0.29
SRP54-203ENST00000553544 LILRB3O75022 631 aa13.22□□□□□ -0.29
SRP54-203ENST00000553544 SSBP05455 408 aaKnown RBP eCLIP13.22□□□□□ -0.29
SRP54-203ENST00000553544 SFNP31947 248 aa13.22□□□□□ -0.29
SRP54-203ENST00000553544 RAB27AP51159 221 aa13.22□□□□□ -0.29
SRP54-203ENST00000553544 PPP4R3AQ6IN85 833 aa13.22□□□□□ -0.29
SRP54-203ENST00000553544 ZNF280BQ86YH2 543 aa13.22□□□□□ -0.29
SRP54-203ENST00000553544 RDM1Q8NG50 284 aa13.22□□□□□ -0.29
SRP54-203ENST00000553544 URGCPQ8TCY9 931 aa13.22□□□□□ -0.29
SRP54-203ENST00000553544 BCL7CQ8WUZ0 217 aaPredicted RBP13.22□□□□□ -0.29
SRP54-203ENST00000553544 RSAD2Q8WXG1 361 aa13.22□□□□□ -0.29
SRP54-203ENST00000553544 RUBCNQ92622 972 aa13.22□□□□□ -0.29
SRP54-203ENST00000553544 TNFRSF25Q93038 417 aa13.22□□□□□ -0.29
SRP54-203ENST00000553544 FAM193BQ96PV7 902 aaPredicted RBP13.22□□□□□ -0.29
SRP54-203ENST00000553544 VN1R3Q9BXE9 311 aa13.22□□□□□ -0.29
SRP54-203ENST00000553544 UNC45AQ9H3U1 944 aa13.22□□□□□ -0.29
SRP54-203ENST00000553544 WDR6Q9NNW5 1121 aaKnown RBP13.22□□□□□ -0.29
SRP54-203ENST00000553544 FAM105AQ9NUU6 356 aa13.22□□□□□ -0.29
SRP54-203ENST00000553544 KANSL3Q9P2N6 904 aa13.22□□□□□ -0.29
SRP54-203ENST00000553544 DNAJB4Q9UDY4 337 aa13.22□□□□□ -0.29
SRP54-203ENST00000553544 SIT1Q9Y3P8 196 aa13.22□□□□□ -0.29
SRP54-203ENST00000553544 ARID2Q68CP9 1835 aa13.22□□□□□ -0.29
SRP54-203ENST00000553544 A0A087WZ62 844 aa13.21□□□□□ -0.29
SRP54-203ENST00000553544 CCDC194A0A1B0GVG4 234 aa13.21□□□□□ -0.29
SRP54-203ENST00000553544 SLC37A4O43826 429 aa13.21□□□□□ -0.29
SRP54-203ENST00000553544 SRFP11831 508 aa13.21□□□□□ -0.29
SRP54-203ENST00000553544 JAK3P52333 1124 aa13.21□□□□□ -0.29
SRP54-203ENST00000553544 PRKCEQ02156 737 aa13.21□□□□□ -0.29
SRP54-203ENST00000553544 TARBP2Q15633 366 aaKnown RBP13.21□□□□□ -0.29
SRP54-203ENST00000553544 UGCGQ16739 394 aa13.21□□□□□ -0.29
SRP54-203ENST00000553544 EARS2Q5JPH6 523 aaKnown RBP13.21□□□□□ -0.29
SRP54-203ENST00000553544 PHLDB3Q6NSJ2 640 aa13.21□□□□□ -0.29
SRP54-203ENST00000553544 NEK8Q86SG6 692 aa13.21□□□□□ -0.29
SRP54-203ENST00000553544 C1orf210Q8IVY1 113 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms