RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 CCDC172P0C7W6 258 aa7.99□□□□□ -1.13
ATXN3-221ENST00000553498 RSPH10BP0C881 870 aa7.99□□□□□ -1.13
ATXN3-221ENST00000553498 ALDH5A1P51649 535 aaPredicted RBP7.99□□□□□ -1.13
ATXN3-221ENST00000553498 NCKAP1LP55160 1127 aa7.99□□□□□ -1.13
ATXN3-221ENST00000553498 HERVK_113P62684 666 aa7.99□□□□□ -1.13
ATXN3-221ENST00000553498 CCNA1P78396 465 aa7.99□□□□□ -1.13
ATXN3-221ENST00000553498 GOLGA8FQ08AF8 430 aa7.99□□□□□ -1.13
ATXN3-221ENST00000553498 RAD51AP2Q09MP3 1159 aa7.99□□□□□ -1.13
ATXN3-221ENST00000553498 GOLGA8DPQ0D2H9 430 aa7.99□□□□□ -1.13
ATXN3-221ENST00000553498 NR1H3Q13133 447 aa7.99□□□□□ -1.13
ATXN3-221ENST00000553498 SNAPC2Q13487 334 aa7.99□□□□□ -1.13
ATXN3-221ENST00000553498 DOCK1Q14185 1865 aa7.99□□□□□ -1.13
ATXN3-221ENST00000553498 PLS1Q14651 629 aa7.99□□□□□ -1.13
ATXN3-221ENST00000553498 PTPN21Q16825 1174 aa7.99□□□□□ -1.13
ATXN3-221ENST00000553498 EXOC3L4Q17RC7 722 aa7.99□□□□□ -1.13
ATXN3-221ENST00000553498 C10orf76Q5T2E6 689 aa7.99□□□□□ -1.13
ATXN3-221ENST00000553498 PPP1R26Q5T8A7 1209 aaPredicted RBP7.99□□□□□ -1.13
ATXN3-221ENST00000553498 MRPL14Q6P1L8 145 aaKnown RBP7.99□□□□□ -1.13
ATXN3-221ENST00000553498 PDXDC1Q6P996 788 aa7.99□□□□□ -1.13
ATXN3-221ENST00000553498 WDR59Q6PJI9 974 aa7.99□□□□□ -1.13
ATXN3-221ENST00000553498 ABHD15Q6UXT9 468 aa7.99□□□□□ -1.13
ATXN3-221ENST00000553498 GBP6Q6ZN66 633 aa7.99□□□□□ -1.13
ATXN3-221ENST00000553498 GADL1Q6ZQY3 521 aa7.99□□□□□ -1.13
ATXN3-221ENST00000553498 INTS8Q75QN2 995 aaKnown RBP7.99□□□□□ -1.13
ATXN3-221ENST00000553498 FAM186BQ8IYM0 893 aa7.99□□□□□ -1.13
ATXN3-221ENST00000553498 SYCP3Q8IZU3 236 aa7.99□□□□□ -1.13
ATXN3-221ENST00000553498 DAW1Q8N136 415 aa7.99□□□□□ -1.13
ATXN3-221ENST00000553498 UBE2Q2Q8WVN8 375 aa7.99□□□□□ -1.13
ATXN3-221ENST00000553498 BORCS6Q96GS4 357 aa7.99□□□□□ -1.13
ATXN3-221ENST00000553498 WNK4Q96J92 1243 aa7.99□□□□□ -1.13
ATXN3-221ENST00000553498 UIMC1Q96RL1 719 aa7.99□□□□□ -1.13
ATXN3-221ENST00000553498 FGFBP2Q9BYJ0 223 aa7.99□□□□□ -1.13
ATXN3-221ENST00000553498 TAF1DQ9H5J8 278 aaPredicted RBP7.99□□□□□ -1.13
ATXN3-221ENST00000553498 AGPAT3Q9NRZ7 376 aa7.99□□□□□ -1.13
ATXN3-221ENST00000553498 AGPAT5Q9NUQ2 364 aa7.99□□□□□ -1.13
ATXN3-221ENST00000553498 AIPL1Q9NZN9 384 aa7.99□□□□□ -1.13
ATXN3-221ENST00000553498 IGKV6D-21A0A0A0MT36 114 aa7.98□□□□□ -1.13
ATXN3-221ENST00000553498 CTAGE9A4FU28 777 aa7.98□□□□□ -1.13
ATXN3-221ENST00000553498 RBAK-RBAKDNI3L0D1 243 aa7.98□□□□□ -1.13
ATXN3-221ENST00000553498 K7ENM7 598 aa7.98□□□□□ -1.13
ATXN3-221ENST00000553498 RNF225M0QZC1 329 aaPredicted RBP7.98□□□□□ -1.13
ATXN3-221ENST00000553498 GAS2O43903 313 aaKnown RBP7.98□□□□□ -1.13
ATXN3-221ENST00000553498 AKAP3O75969 853 aa7.98□□□□□ -1.13
ATXN3-221ENST00000553498 GFPT2O94808 682 aa7.98□□□□□ -1.13
ATXN3-221ENST00000553498 SERPING1P05155 500 aa7.98□□□□□ -1.13
ATXN3-221ENST00000553498 SUPT20HL2P0C7V6 817 aa7.98□□□□□ -1.13
ATXN3-221ENST00000553498 KRT13P13646 458 aa7.98□□□□□ -1.13
ATXN3-221ENST00000553498 VAV2P52735 878 aa7.98□□□□□ -1.13
ATXN3-221ENST00000553498 ACTR2P61160 394 aa7.98□□□□□ -1.13
ATXN3-221ENST00000553498 KCNMA1Q12791 1236 aa7.98□□□□□ -1.13
ATXN3-221ENST00000553498 KIF5AQ12840 1032 aa7.98□□□□□ -1.13
ATXN3-221ENST00000553498 DMP1Q13316 513 aaPredicted RBP7.98□□□□□ -1.13
ATXN3-221ENST00000553498 IRF5Q13568 498 aa7.98□□□□□ -1.13
ATXN3-221ENST00000553498 KCTD2Q14681 263 aa7.98□□□□□ -1.13
ATXN3-221ENST00000553498 XKR9Q5GH70 373 aa7.98□□□□□ -1.13
ATXN3-221ENST00000553498 TREML2Q5T2D2 321 aa7.98□□□□□ -1.13
ATXN3-221ENST00000553498 SFMBT2Q5VUG0 894 aa7.98□□□□□ -1.13
ATXN3-221ENST00000553498 FAM160B1Q5W0V3 765 aa7.98□□□□□ -1.13
ATXN3-221ENST00000553498 MAP4K3Q8IVH8 894 aa7.98□□□□□ -1.13
ATXN3-221ENST00000553498 FAM133AQ8N9E0 248 aa7.98□□□□□ -1.13
ATXN3-221ENST00000553498 MORC4Q8TE76 937 aa7.98□□□□□ -1.13
ATXN3-221ENST00000553498 AFAP1L1Q8TED9 768 aa7.98□□□□□ -1.13
ATXN3-221ENST00000553498 SLC35C1Q96A29 364 aa7.98□□□□□ -1.13
ATXN3-221ENST00000553498 FAM167AQ96KS9 214 aa7.98□□□□□ -1.13
ATXN3-221ENST00000553498 ZFP42Q96MM3 310 aa7.98□□□□□ -1.13
ATXN3-221ENST00000553498 ASCC2Q9H1I8 757 aaPredicted RBP7.98□□□□□ -1.13
ATXN3-221ENST00000553498 DEF6Q9H4E7 631 aa7.98□□□□□ -1.13
ATXN3-221ENST00000553498 ELP3Q9H9T3 547 aa7.98□□□□□ -1.13
ATXN3-221ENST00000553498 KIAA1586Q9HCI6 787 aa7.98□□□□□ -1.13
ATXN3-221ENST00000553498 FAM207AQ9NSI2 230 aaPredicted RBP7.98□□□□□ -1.13
ATXN3-221ENST00000553498 MAFBQ9Y5Q3 323 aaPredicted RBP7.98□□□□□ -1.13
ATXN3-221ENST00000553498 IGSF9BQ9UPX0 1349 aa7.98□□□□□ -1.13
ATXN3-221ENST00000553498 ZMYM2Q9UBW7 1377 aa7.97□□□□□ -1.13
ATXN3-221ENST00000553498 BAZ2BQ9UIF8 2168 aaKnown RBP7.97□□□□□ -1.13
ATXN3-221ENST00000553498 ANO9A1A5B4 782 aa7.97□□□□□ -1.13
ATXN3-221ENST00000553498 LRRC53A6NM62 1247 aa7.97□□□□□ -1.13
ATXN3-221ENST00000553498 SFI1A8K8P3 1242 aa7.97□□□□□ -1.13
ATXN3-221ENST00000553498 EFCAB8A8MWE9 144 aa7.97□□□□□ -1.13
ATXN3-221ENST00000553498 ZBTB39O15060 712 aa7.97□□□□□ -1.13
ATXN3-221ENST00000553498 PJA2O43164 708 aa7.97□□□□□ -1.13
ATXN3-221ENST00000553498 EXOC3O60645 756 aa7.97□□□□□ -1.13
ATXN3-221ENST00000553498 TUBBP07437 444 aa7.97□□□□□ -1.13
ATXN3-221ENST00000553498 CETPP11597 493 aa7.97□□□□□ -1.13
ATXN3-221ENST00000553498 NMT1P30419 496 aaKnown RBP7.97□□□□□ -1.13
ATXN3-221ENST00000553498 GTF2H1P32780 548 aa7.97□□□□□ -1.13
ATXN3-221ENST00000553498 PRKCIP41743 596 aa7.97□□□□□ -1.13
ATXN3-221ENST00000553498 GCLCP48506 637 aaPredicted RBP7.97□□□□□ -1.13
ATXN3-221ENST00000553498 SLC26A2P50443 739 aa7.97□□□□□ -1.13
ATXN3-221ENST00000553498 GTF2A2P52657 109 aa7.97□□□□□ -1.13
ATXN3-221ENST00000553498 PRKG1Q13976 671 aa7.97□□□□□ -1.13
ATXN3-221ENST00000553498 MTF1Q14872 753 aa7.97□□□□□ -1.13
ATXN3-221ENST00000553498 NBPF20Q3BBV1 942 aa7.97□□□□□ -1.13
ATXN3-221ENST00000553498 BRDTQ58F21 947 aaPredicted RBP7.97□□□□□ -1.13
ATXN3-221ENST00000553498 METTL7BQ6UX53 244 aa7.97□□□□□ -1.13
ATXN3-221ENST00000553498 Q6ZVU0 165 aa7.97□□□□□ -1.13
ATXN3-221ENST00000553498 ANO5Q75V66 913 aa7.97□□□□□ -1.13
ATXN3-221ENST00000553498 RRAGAQ7L523 313 aa7.97□□□□□ -1.13
ATXN3-221ENST00000553498 HAUS6Q7Z4H7 955 aa7.97□□□□□ -1.13
ATXN3-221ENST00000553498 KIAA1328Q86T90 577 aa7.97□□□□□ -1.13
ATXN3-221ENST00000553498 VPS36Q86VN1 386 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms