RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 SSPNQ14714 243 aa5.73□□□□□ -1.49
ATXN3-220ENST00000553491 PLEKHN1Q494U1 663 aaPredicted RBP5.73□□□□□ -1.49
ATXN3-220ENST00000553491 GORABQ5T7V8 394 aa5.73□□□□□ -1.49
ATXN3-220ENST00000553491 MBLAC2Q68D91 279 aa5.73□□□□□ -1.49
ATXN3-220ENST00000553491 TTLL5Q6EMB2 1281 aa5.73□□□□□ -1.49
ATXN3-220ENST00000553491 KCNT2Q6UVM3 1135 aa5.73□□□□□ -1.49
ATXN3-220ENST00000553491 ZNF804AQ7Z570 1209 aa5.73□□□□□ -1.49
ATXN3-220ENST00000553491 LDHDQ86WU2 507 aa5.73□□□□□ -1.49
ATXN3-220ENST00000553491 IGDCC3Q8IVU1 814 aa5.73□□□□□ -1.49
ATXN3-220ENST00000553491 CCDC103Q8IW40 242 aa5.73□□□□□ -1.49
ATXN3-220ENST00000553491 TMEFF1Q8IYR6 380 aa5.73□□□□□ -1.49
ATXN3-220ENST00000553491 ANKRD44Q8N8A2 993 aa5.73□□□□□ -1.49
ATXN3-220ENST00000553491 GSTCDQ8NEC7 633 aa5.73□□□□□ -1.49
ATXN3-220ENST00000553491 ZSCAN18Q8TBC5 510 aaPredicted RBP5.73□□□□□ -1.49
ATXN3-220ENST00000553491 PTPRN2Q92932 1015 aa5.73□□□□□ -1.49
ATXN3-220ENST00000553491 MFSD3Q96ES6 412 aa5.73□□□□□ -1.49
ATXN3-220ENST00000553491 MTA3Q9BTC8 594 aa5.73□□□□□ -1.49
ATXN3-220ENST00000553491 MXD3Q9BW11 206 aa5.73□□□□□ -1.49
ATXN3-220ENST00000553491 RTFDC1Q9BY42 306 aaPredicted RBP5.73□□□□□ -1.49
ATXN3-220ENST00000553491 SPC25Q9HBM1 224 aa5.73□□□□□ -1.49
ATXN3-220ENST00000553491 TRIM39Q9HCM9 518 aa5.73□□□□□ -1.49
ATXN3-220ENST00000553491 CLEC1BQ9P126 229 aa5.73□□□□□ -1.49
ATXN3-220ENST00000553491 NDOR1Q9UHB4 597 aa5.73□□□□□ -1.49
ATXN3-220ENST00000553491 SFMBT1Q9UHJ3 866 aa5.73□□□□□ -1.49
ATXN3-220ENST00000553491 PLA2G2DQ9UNK4 145 aa5.73□□□□□ -1.49
ATXN3-220ENST00000553491 PCDHA5Q9Y5H7 936 aa5.73□□□□□ -1.49
ATXN3-220ENST00000553491 HCFC2Q9Y5Z7 792 aa5.73□□□□□ -1.49
ATXN3-220ENST00000553491 ECM29Q5VYK3 1845 aa5.73□□□□□ -1.49
ATXN3-220ENST00000553491 UTYO14607 1347 aa5.73□□□□□ -1.49
ATXN3-220ENST00000553491 MROH5Q6ZUA9 1318 aa5.73□□□□□ -1.49
ATXN3-220ENST00000553491 RTL9Q8NET4 1388 aa5.72□□□□□ -1.49
ATXN3-220ENST00000553491 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.72□□□□□ -1.49
ATXN3-220ENST00000553491 SHTN1A0MZ66 631 aa5.72□□□□□ -1.49
ATXN3-220ENST00000553491 YDJCA8MPS7 323 aa5.72□□□□□ -1.49
ATXN3-220ENST00000553491 EYA2O00167 538 aa5.72□□□□□ -1.49
ATXN3-220ENST00000553491 SURF6O75683 361 aaKnown RBP5.72□□□□□ -1.49
ATXN3-220ENST00000553491 CYBBP04839 570 aa5.72□□□□□ -1.49
ATXN3-220ENST00000553491 IFIT1P09914 478 aaKnown RBP5.72□□□□□ -1.49
ATXN3-220ENST00000553491 ZSCAN22P10073 491 aaPredicted RBP5.72□□□□□ -1.49
ATXN3-220ENST00000553491 GLI4P10075 376 aa5.72□□□□□ -1.49
ATXN3-220ENST00000553491 KLRK1P26718 216 aa5.72□□□□□ -1.49
ATXN3-220ENST00000553491 HIBADHP31937 336 aaKnown RBP5.72□□□□□ -1.49
ATXN3-220ENST00000553491 MAPKAPK2P49137 400 aa5.72□□□□□ -1.49
ATXN3-220ENST00000553491 ATP8B2P98198 1209 aa5.72□□□□□ -1.49
ATXN3-220ENST00000553491 CHAF1AQ13111 956 aaPredicted RBP5.72□□□□□ -1.49
ATXN3-220ENST00000553491 NR1I3Q14994 352 aa5.72□□□□□ -1.49
ATXN3-220ENST00000553491 TESK1Q15569 626 aa5.72□□□□□ -1.49
ATXN3-220ENST00000553491 PTPROQ16827 1216 aa5.72□□□□□ -1.49
ATXN3-220ENST00000553491 TBC1D10BQ4KMP7 808 aaPredicted RBP5.72□□□□□ -1.49
ATXN3-220ENST00000553491 CAVIN4Q5BKX8 364 aa5.72□□□□□ -1.49
ATXN3-220ENST00000553491 ACBD5Q5T8D3 534 aaPredicted RBP5.72□□□□□ -1.49
ATXN3-220ENST00000553491 PAQR3Q6TCH7 311 aa5.72□□□□□ -1.49
ATXN3-220ENST00000553491 TMC6Q7Z403 805 aa5.72□□□□□ -1.49
ATXN3-220ENST00000553491 CPNE8Q86YQ8 564 aa5.72□□□□□ -1.49
ATXN3-220ENST00000553491 PPIL6Q8IXY8 311 aa5.72□□□□□ -1.49
ATXN3-220ENST00000553491 SMC1BQ8NDV3 1235 aa5.72□□□□□ -1.49
ATXN3-220ENST00000553491 MZB1Q8WU39 189 aa5.72□□□□□ -1.49
ATXN3-220ENST00000553491 DCAF4Q8WV16 495 aa5.72□□□□□ -1.49
ATXN3-220ENST00000553491 SCLYQ96I15 445 aa5.72□□□□□ -1.49
ATXN3-220ENST00000553491 SIRT5Q9NXA8 310 aa5.72□□□□□ -1.49
ATXN3-220ENST00000553491 RIPOR2Q9Y4F9 1068 aa5.72□□□□□ -1.49
ATXN3-220ENST00000553491 TRAF6Q9Y4K3 522 aa5.72□□□□□ -1.49
ATXN3-220ENST00000553491 KCTD3Q9Y597 815 aa5.72□□□□□ -1.49
ATXN3-220ENST00000553491 NPFFR2Q9Y5X5 522 aa5.72□□□□□ -1.49
ATXN3-220ENST00000553491 COL4A5P29400 1685 aa5.72□□□□□ -1.49
ATXN3-220ENST00000553491 LTBP1Q14766 1721 aa5.71□□□□□ -1.49
ATXN3-220ENST00000553491 A0A087X0B3 334 aa5.71□□□□□ -1.5
ATXN3-220ENST00000553491 C7orf72A4D263 438 aa5.71□□□□□ -1.5
ATXN3-220ENST00000553491 MEFVO15553 781 aaPredicted RBP5.71□□□□□ -1.5
ATXN3-220ENST00000553491 DNAJC8O75937 253 aaPredicted RBP5.71□□□□□ -1.5
ATXN3-220ENST00000553491 PDE8BO95263 885 aa5.71□□□□□ -1.5
ATXN3-220ENST00000553491 SLC5A1P13866 664 aa5.71□□□□□ -1.5
ATXN3-220ENST00000553491 PAMP19021 973 aa5.71□□□□□ -1.5
ATXN3-220ENST00000553491 IGFBP6P24592 240 aaPredicted RBP5.71□□□□□ -1.5
ATXN3-220ENST00000553491 TIMM10P62072 90 aa5.71□□□□□ -1.5
ATXN3-220ENST00000553491 TFCP2Q12800 502 aa5.71□□□□□ -1.5
ATXN3-220ENST00000553491 UBE4AQ14139 1066 aa5.71□□□□□ -1.5
ATXN3-220ENST00000553491 C20orf194Q5TEA3 1177 aa5.71□□□□□ -1.5
ATXN3-220ENST00000553491 MAMDC2Q7Z304 686 aaPredicted RBP5.71□□□□□ -1.5
ATXN3-220ENST00000553491 BRAPQ7Z569 592 aa5.71□□□□□ -1.5
ATXN3-220ENST00000553491 FGD2Q7Z6J4 655 aa5.71□□□□□ -1.5
ATXN3-220ENST00000553491 PNMA8AQ86V59 439 aaPredicted RBP5.71□□□□□ -1.5
ATXN3-220ENST00000553491 SIGLEC10Q96LC7 697 aa5.71□□□□□ -1.5
ATXN3-220ENST00000553491 MMP19Q99542 508 aa5.71□□□□□ -1.5
ATXN3-220ENST00000553491 COA1Q9GZY4 146 aa5.71□□□□□ -1.5
ATXN3-220ENST00000553491 CHMP4BQ9H444 224 aaKnown RBP5.71□□□□□ -1.5
ATXN3-220ENST00000553491 TAF1DQ9H5J8 278 aaPredicted RBP5.71□□□□□ -1.5
ATXN3-220ENST00000553491 CD209Q9NNX6 404 aa5.71□□□□□ -1.5
ATXN3-220ENST00000553491 GPRC5DQ9NZD1 345 aa5.71□□□□□ -1.5
ATXN3-220ENST00000553491 DDX19BQ9UMR2 479 aa5.71□□□□□ -1.5
ATXN3-220ENST00000553491 AKAP11Q9UKA4 1901 aa5.71□□□□□ -1.5
ATXN3-220ENST00000553491 DUOX1Q9NRD9 1551 aa5.71□□□□□ -1.5
ATXN3-220ENST00000553491 CDK5RAP2Q96SN8 1893 aa5.71□□□□□ -1.5
ATXN3-220ENST00000553491 PNMA6EA0A0J9YXQ4 647 aa5.7□□□□□ -1.5
ATXN3-220ENST00000553491 NPHP3-ACAD11A0A0J9YXS1 232 aa5.7□□□□□ -1.5
ATXN3-220ENST00000553491 A0A1W2PQ27 194 aa5.7□□□□□ -1.5
ATXN3-220ENST00000553491 A0A1W2PQ64 194 aa5.7□□□□□ -1.5
ATXN3-220ENST00000553491 A0A1W2PQC6 194 aa5.7□□□□□ -1.5
ATXN3-220ENST00000553491 A0A1W2PQD8 194 aa5.7□□□□□ -1.5
ATXN3-220ENST00000553491 NUAK1O60285 661 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms