RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 NFIBO00712 420 aa13.98□□□□□ -0.17
SHMT2-205ENST00000553474 KIF3CO14782 793 aa13.98□□□□□ -0.17
SHMT2-205ENST00000553474 SART1O43290 800 aaKnown RBP13.98□□□□□ -0.17
SHMT2-205ENST00000553474 SMTNP53814 917 aa13.98□□□□□ -0.17
SHMT2-205ENST00000553474 SKOR1P84550 965 aa13.98□□□□□ -0.17
SHMT2-205ENST00000553474 EPC2Q52LR7 807 aa13.98□□□□□ -0.17
SHMT2-205ENST00000553474 SPDYCQ5MJ68 293 aa13.98□□□□□ -0.17
SHMT2-205ENST00000553474 LRIG3Q6UXM1 1119 aa13.98□□□□□ -0.17
SHMT2-205ENST00000553474 SLC35G2Q8TBE7 412 aa13.98□□□□□ -0.17
SHMT2-205ENST00000553474 RIN2Q8WYP3 895 aaPredicted RBP13.98□□□□□ -0.17
SHMT2-205ENST00000553474 SEC14L1Q92503 715 aa13.98□□□□□ -0.17
SHMT2-205ENST00000553474 SENP7Q9BQF6 1050 aa13.98□□□□□ -0.17
SHMT2-205ENST00000553474 BCAS3Q9H6U6 928 aa13.98□□□□□ -0.17
SHMT2-205ENST00000553474 ZNF408Q9H9D4 720 aa13.98□□□□□ -0.17
SHMT2-205ENST00000553474 COL20A1Q9P218 1284 aa13.98□□□□□ -0.17
SHMT2-205ENST00000553474 KCNG1Q9UIX4 513 aa13.98□□□□□ -0.17
SHMT2-205ENST00000553474 PPP1R9AQ9ULJ8 1098 aa13.98□□□□□ -0.17
SHMT2-205ENST00000553474 NOC2LQ9Y3T9 749 aaKnown RBP13.98□□□□□ -0.17
SHMT2-205ENST00000553474 WDR81Q562E7 1941 aa13.98□□□□□ -0.17
SHMT2-205ENST00000553474 TULP2O00295 520 aa13.97□□□□□ -0.17
SHMT2-205ENST00000553474 KRIT1O00522 736 aa13.97□□□□□ -0.17
SHMT2-205ENST00000553474 GZMAP12544 262 aa13.97□□□□□ -0.17
SHMT2-205ENST00000553474 HSPA6P17066 643 aa13.97□□□□□ -0.17
SHMT2-205ENST00000553474 SCP2P22307 547 aa13.97□□□□□ -0.17
SHMT2-205ENST00000553474 MRPS9P82933 396 aaKnown RBP13.97□□□□□ -0.17
SHMT2-205ENST00000553474 ITGB3BPQ13352 177 aaPredicted RBP13.97□□□□□ -0.17
SHMT2-205ENST00000553474 MTMR3Q13615 1198 aa13.97□□□□□ -0.17
SHMT2-205ENST00000553474 PRKG1Q13976 671 aa13.97□□□□□ -0.17
SHMT2-205ENST00000553474 PGM5Q15124 567 aa13.97□□□□□ -0.17
SHMT2-205ENST00000553474 NBPF12Q5TAG4 269 aaPredicted RBP13.97□□□□□ -0.17
SHMT2-205ENST00000553474 PHLDB3Q6NSJ2 640 aa13.97□□□□□ -0.17
SHMT2-205ENST00000553474 CHADLQ6NUI6 762 aa13.97□□□□□ -0.17
SHMT2-205ENST00000553474 C11orf63Q6NUN7 778 aa13.97□□□□□ -0.17
SHMT2-205ENST00000553474 HAUS6Q7Z4H7 955 aa13.97□□□□□ -0.17
SHMT2-205ENST00000553474 TSEN2Q8NCE0 465 aaKnown RBP13.97□□□□□ -0.17
SHMT2-205ENST00000553474 CASKIN2Q8WXE0 1202 aa13.97□□□□□ -0.17
SHMT2-205ENST00000553474 IFT81Q8WYA0 676 aa13.97□□□□□ -0.17
SHMT2-205ENST00000553474 ZIM3Q96PE6 472 aa13.97□□□□□ -0.17
SHMT2-205ENST00000553474 AGPAT1Q99943 283 aa13.97□□□□□ -0.17
SHMT2-205ENST00000553474 POLD4Q9HCU8 107 aa13.97□□□□□ -0.17
SHMT2-205ENST00000553474 SAMM50Q9Y512 469 aa13.97□□□□□ -0.17
SHMT2-205ENST00000553474 SSC5DA1L4H1 1573 aa13.97□□□□□ -0.17
SHMT2-205ENST00000553474 GOLGA6L10A0A0M3HER8 536 aa13.96□□□□□ -0.17
SHMT2-205ENST00000553474 ZBED4O75132 1171 aa13.96□□□□□ -0.17
SHMT2-205ENST00000553474 TRIM49P0CI25 452 aa13.96□□□□□ -0.17
SHMT2-205ENST00000553474 TRIM49CP0CI26 452 aa13.96□□□□□ -0.17
SHMT2-205ENST00000553474 ALAS1P13196 640 aa13.96□□□□□ -0.17
SHMT2-205ENST00000553474 SAMD1Q6SPF0 538 aaPredicted RBP13.96□□□□□ -0.17
SHMT2-205ENST00000553474 LRRC31Q6UY01 552 aa13.96□□□□□ -0.17
SHMT2-205ENST00000553474 SLC30A10Q6XR72 485 aa13.96□□□□□ -0.17
SHMT2-205ENST00000553474 CDCA5Q96FF9 252 aa13.96□□□□□ -0.17
SHMT2-205ENST00000553474 FAM81BQ96LP2 452 aa13.96□□□□□ -0.17
SHMT2-205ENST00000553474 TEPSINQ96N21 525 aa13.96□□□□□ -0.17
SHMT2-205ENST00000553474 CAPS2Q9BXY5 557 aa13.96□□□□□ -0.17
SHMT2-205ENST00000553474 FAM107BQ9H098 131 aa13.96□□□□□ -0.17
SHMT2-205ENST00000553474 FAM114A2Q9NRY5 505 aa13.96□□□□□ -0.17
SHMT2-205ENST00000553474 HSPBP1Q9NZL4 362 aa13.96□□□□□ -0.17
SHMT2-205ENST00000553474 FZD1Q9UP38 647 aa13.96□□□□□ -0.17
SHMT2-205ENST00000553474 CTDP1Q9Y5B0 961 aaPredicted RBP13.96□□□□□ -0.17
SHMT2-205ENST00000553474 PPP2R3BQ9Y5P8 575 aa13.96□□□□□ -0.17
SHMT2-205ENST00000553474 EMSYQ7Z589 1322 aa13.96□□□□□ -0.17
SHMT2-205ENST00000553474 DOCK1Q14185 1865 aa13.96□□□□□ -0.17
SHMT2-205ENST00000553474 HMGB1P1B2RPK0 211 aaPredicted RBP13.96□□□□□ -0.18
SHMT2-205ENST00000553474 BUB1BO60566 1050 aaPredicted RBP13.96□□□□□ -0.18
SHMT2-205ENST00000553474 MTA2O94776 668 aa13.96□□□□□ -0.18
SHMT2-205ENST00000553474 GTF2H1P32780 548 aa13.96□□□□□ -0.18
SHMT2-205ENST00000553474 DNA2P51530 1060 aa13.96□□□□□ -0.18
SHMT2-205ENST00000553474 OAZ1P54368 228 aa13.96□□□□□ -0.18
SHMT2-205ENST00000553474 ZNF746Q6NUN9 644 aaPredicted RBP13.96□□□□□ -0.18
SHMT2-205ENST00000553474 OTUD6AQ7L8S5 288 aa13.96□□□□□ -0.18
SHMT2-205ENST00000553474 KSR1Q8IVT5 923 aa13.96□□□□□ -0.18
SHMT2-205ENST00000553474 DHX37Q8IY37 1157 aaKnown RBP13.96□□□□□ -0.18
SHMT2-205ENST00000553474 SPIRE2Q8WWL2 714 aa13.96□□□□□ -0.18
SHMT2-205ENST00000553474 KIFAP3Q92845 792 aa13.96□□□□□ -0.18
SHMT2-205ENST00000553474 GPRASP2Q96D09 838 aa13.96□□□□□ -0.18
SHMT2-205ENST00000553474 SYNGAP1Q96PV0 1343 aa13.96□□□□□ -0.18
SHMT2-205ENST00000553474 GOLGA6L10A6NI86 522 aa13.95□□□□□ -0.18
SHMT2-205ENST00000553474 SRRM3A6NNA2 597 aaPredicted RBP13.95□□□□□ -0.18
SHMT2-205ENST00000553474 DDX39AO00148 427 aaKnown RBP13.95□□□□□ -0.18
SHMT2-205ENST00000553474 ZEB2O60315 1214 aa13.95□□□□□ -0.18
SHMT2-205ENST00000553474 MXI1P50539 228 aa13.95□□□□□ -0.18
SHMT2-205ENST00000553474 RTP1P59025 263 aa13.95□□□□□ -0.18
SHMT2-205ENST00000553474 RPS6P62753 249 aaKnown RBP13.95□□□□□ -0.18
SHMT2-205ENST00000553474 PLS1Q14651 629 aa13.95□□□□□ -0.18
SHMT2-205ENST00000553474 RNF207Q6ZRF8 634 aa13.95□□□□□ -0.18
SHMT2-205ENST00000553474 PAXIP1Q6ZW49 1069 aaPredicted RBP13.95□□□□□ -0.18
SHMT2-205ENST00000553474 MAP4K3Q8IVH8 894 aa13.95□□□□□ -0.18
SHMT2-205ENST00000553474 KLHL7Q8IXQ5 586 aa13.95□□□□□ -0.18
SHMT2-205ENST00000553474 EFCAB13Q8IY85 973 aa13.95□□□□□ -0.18
SHMT2-205ENST00000553474 IL31RAQ8NI17 732 aa13.95□□□□□ -0.18
SHMT2-205ENST00000553474 RPS6KC1Q96S38 1066 aa13.95□□□□□ -0.18
SHMT2-205ENST00000553474 PDCD2LQ9BRP1 358 aa13.95□□□□□ -0.18
SHMT2-205ENST00000553474 NTPCRQ9BSD7 190 aaKnown RBP13.95□□□□□ -0.18
SHMT2-205ENST00000553474 RAB17Q9H0T7 212 aa13.95□□□□□ -0.18
SHMT2-205ENST00000553474 UBE2TQ9NPD8 197 aaPredicted RBP13.95□□□□□ -0.18
SHMT2-205ENST00000553474 PXMP2Q9NR77 195 aa13.95□□□□□ -0.18
SHMT2-205ENST00000553474 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.95□□□□□ -0.18
SHMT2-205ENST00000553474 COQ4Q9Y3A0 265 aa13.95□□□□□ -0.18
SHMT2-205ENST00000553474 UTP11Q9Y3A2 253 aaKnown RBP13.95□□□□□ -0.18
SHMT2-205ENST00000553474 H0YCG3 227 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms