RNA–Protein interactions for RNA: ENST00000551544.5

CACNB3-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-219ENST00000551544 KAT5Q92993 513 aa14.08□□□□□ -0.16
CACNB3-219ENST00000551544 NAP1L3Q99457 506 aaPredicted RBP14.08□□□□□ -0.16
CACNB3-219ENST00000551544 STRA6Q9BX79 667 aa14.08□□□□□ -0.16
CACNB3-219ENST00000551544 DIS3Q9Y2L1 958 aaKnown RBP14.08□□□□□ -0.16
CACNB3-219ENST00000551544 DAAM1Q9Y4D1 1078 aa14.08□□□□□ -0.16
CACNB3-219ENST00000551544 TMEM150BA6NC51 233 aa14.08□□□□□ -0.16
CACNB3-219ENST00000551544 SPDYE2BA6NHP3 402 aa14.08□□□□□ -0.16
CACNB3-219ENST00000551544 SPDYE6P0CI01 402 aa14.08□□□□□ -0.16
CACNB3-219ENST00000551544 HNRNPH1P31943 449 aaKnown RBP14.08□□□□□ -0.16
CACNB3-219ENST00000551544 BIRC3Q13489 604 aa14.08□□□□□ -0.16
CACNB3-219ENST00000551544 INTS8Q75QN2 995 aaKnown RBP14.08□□□□□ -0.16
CACNB3-219ENST00000551544 IL31RAQ8NI17 732 aa14.08□□□□□ -0.16
CACNB3-219ENST00000551544 KRT35Q92764 455 aa14.08□□□□□ -0.16
CACNB3-219ENST00000551544 RIT2Q99578 217 aa14.08□□□□□ -0.16
CACNB3-219ENST00000551544 ZNF70Q9UC06 446 aaPredicted RBP14.08□□□□□ -0.16
CACNB3-219ENST00000551544 CCPG1Q9ULG6 757 aa14.08□□□□□ -0.16
CACNB3-219ENST00000551544 SNX24Q9Y343 169 aa14.08□□□□□ -0.16
CACNB3-219ENST00000551544 GOLGA8IPA6NC78 632 aa14.07□□□□□ -0.16
CACNB3-219ENST00000551544 GOLGA8JA6NMD2 632 aa14.07□□□□□ -0.16
CACNB3-219ENST00000551544 RAD17O75943 681 aa14.07□□□□□ -0.16
CACNB3-219ENST00000551544 MARCKSL1P49006 195 aa14.07□□□□□ -0.16
CACNB3-219ENST00000551544 MAGOHP61326 146 aaKnown RBP14.07□□□□□ -0.16
CACNB3-219ENST00000551544 RNF187Q5TA31 235 aaPredicted RBP14.07□□□□□ -0.16
CACNB3-219ENST00000551544 RHOT2Q8IXI1 618 aa14.07□□□□□ -0.16
CACNB3-219ENST00000551544 MAGOHBQ96A72 148 aaKnown RBP14.07□□□□□ -0.16
CACNB3-219ENST00000551544 ERP44Q9BS26 406 aa14.07□□□□□ -0.16
CACNB3-219ENST00000551544 PAGR1Q9BTK6 254 aa14.07□□□□□ -0.16
CACNB3-219ENST00000551544 ACP6Q9NPH0 428 aa14.07□□□□□ -0.16
CACNB3-219ENST00000551544 COL20A1Q9P218 1284 aa14.07□□□□□ -0.16
CACNB3-219ENST00000551544 CNOT8Q9UFF9 292 aaKnown RBP14.07□□□□□ -0.16
CACNB3-219ENST00000551544 ZHX2Q9Y6X8 837 aa14.07□□□□□ -0.16
CACNB3-219ENST00000551544 BACH1O14867 736 aa14.07□□□□□ -0.16
CACNB3-219ENST00000551544 ATMINO43313 823 aaPredicted RBP14.07□□□□□ -0.16
CACNB3-219ENST00000551544 FAM107AO95990 144 aa14.07□□□□□ -0.16
CACNB3-219ENST00000551544 HSPA1LP34931 641 aa14.07□□□□□ -0.16
CACNB3-219ENST00000551544 PLTPP55058 493 aa14.07□□□□□ -0.16
CACNB3-219ENST00000551544 GSCP56915 257 aaPredicted RBP14.07□□□□□ -0.16
CACNB3-219ENST00000551544 MESDQ14696 234 aa14.07□□□□□ -0.16
CACNB3-219ENST00000551544 DLGAP5Q15398 846 aa14.07□□□□□ -0.16
CACNB3-219ENST00000551544 PRPF38AQ8NAV1 312 aaKnown RBP14.07□□□□□ -0.16
CACNB3-219ENST00000551544 FAM151AQ8WW52 585 aa14.07□□□□□ -0.16
CACNB3-219ENST00000551544 C18orf8Q96DM3 657 aa14.07□□□□□ -0.16
CACNB3-219ENST00000551544 ACCSQ96QU6 501 aa14.07□□□□□ -0.16
CACNB3-219ENST00000551544 TMEM39BQ9GZU3 492 aa14.07□□□□□ -0.16
CACNB3-219ENST00000551544 TMEM206Q9H813 350 aa14.07□□□□□ -0.16
CACNB3-219ENST00000551544 HSPBP1Q9NZL4 362 aa14.07□□□□□ -0.16
CACNB3-219ENST00000551544 MYH11P35749 1972 aa14.06□□□□□ -0.16
CACNB3-219ENST00000551544 NFIBO00712 420 aa14.06□□□□□ -0.16
CACNB3-219ENST00000551544 MEFVO15553 781 aaPredicted RBP14.06□□□□□ -0.16
CACNB3-219ENST00000551544 P4HBP07237 508 aaKnown RBP14.06□□□□□ -0.16
CACNB3-219ENST00000551544 VCAM1P19320 739 aa14.06□□□□□ -0.16
CACNB3-219ENST00000551544 RFX1P22670 979 aa14.06□□□□□ -0.16
CACNB3-219ENST00000551544 PPP2R2AP63151 447 aa14.06□□□□□ -0.16
CACNB3-219ENST00000551544 FBXW10Q5XX13 1052 aa14.06□□□□□ -0.16
CACNB3-219ENST00000551544 KCNV1Q6PIU1 500 aa14.06□□□□□ -0.16
CACNB3-219ENST00000551544 FAM160B2Q86V87 743 aa14.06□□□□□ -0.16
CACNB3-219ENST00000551544 JAMLQ86YT9 394 aa14.06□□□□□ -0.16
CACNB3-219ENST00000551544 CPXCR1Q8N123 301 aa14.06□□□□□ -0.16
CACNB3-219ENST00000551544 CNKSR1Q969H4 720 aa14.06□□□□□ -0.16
CACNB3-219ENST00000551544 GPRC5CQ9NQ84 441 aa14.06□□□□□ -0.16
CACNB3-219ENST00000551544 SLC12A6Q9UHW9 1150 aa14.06□□□□□ -0.16
CACNB3-219ENST00000551544 C21orf2O43822 256 aa14.06□□□□□ -0.16
CACNB3-219ENST00000551544 SGPL1O95470 568 aa14.06□□□□□ -0.16
CACNB3-219ENST00000551544 GPC5P78333 572 aa14.06□□□□□ -0.16
CACNB3-219ENST00000551544 TNIP1Q15025 636 aa14.06□□□□□ -0.16
CACNB3-219ENST00000551544 DUPD1Q68J44 220 aa14.06□□□□□ -0.16
CACNB3-219ENST00000551544 MICALCLQ6ZW33 695 aa14.06□□□□□ -0.16
CACNB3-219ENST00000551544 UBL4BQ8N7F7 174 aa14.06□□□□□ -0.16
CACNB3-219ENST00000551544 XXYLT1Q8NBI6 393 aa14.06□□□□□ -0.16
CACNB3-219ENST00000551544 PLEKHO2Q8TD55 490 aa14.06□□□□□ -0.16
CACNB3-219ENST00000551544 HOMER2Q9NSB8 354 aa14.06□□□□□ -0.16
CACNB3-219ENST00000551544 FEM1BQ9UK73 627 aa14.06□□□□□ -0.16
CACNB3-219ENST00000551544 ZBTB12Q9Y330 459 aaPredicted RBP14.06□□□□□ -0.16
CACNB3-219ENST00000551544 CAPN7Q9Y6W3 813 aa14.06□□□□□ -0.16
CACNB3-219ENST00000551544 SLC16A4O15374 487 aa14.05□□□□□ -0.16
CACNB3-219ENST00000551544 RARRES1P49788 294 aa14.05□□□□□ -0.16
CACNB3-219ENST00000551544 IFT88Q13099 833 aa14.05□□□□□ -0.16
CACNB3-219ENST00000551544 EPC2Q52LR7 807 aa14.05□□□□□ -0.16
CACNB3-219ENST00000551544 C1orf220Q5T0J3 134 aa14.05□□□□□ -0.16
CACNB3-219ENST00000551544 AGBL2Q5U5Z8 902 aa14.05□□□□□ -0.16
CACNB3-219ENST00000551544 HAUS6Q7Z4H7 955 aa14.05□□□□□ -0.16
CACNB3-219ENST00000551544 PPM1KQ8N3J5 372 aa14.05□□□□□ -0.16
CACNB3-219ENST00000551544 FLAD1Q8NFF5 587 aa14.05□□□□□ -0.16
CACNB3-219ENST00000551544 PCDHB18PQ96TA0 734 aa14.05□□□□□ -0.16
CACNB3-219ENST00000551544 GMNCA6NCL1 334 aa14.05□□□□□ -0.16
CACNB3-219ENST00000551544 PPFIA2O75334 1257 aa14.05□□□□□ -0.16
CACNB3-219ENST00000551544 FSBPO95073 299 aa14.05□□□□□ -0.16
CACNB3-219ENST00000551544 PLS3P13797 630 aa14.05□□□□□ -0.16
CACNB3-219ENST00000551544 COMTP21964 271 aa14.05□□□□□ -0.16
CACNB3-219ENST00000551544 MXI1P50539 228 aa14.05□□□□□ -0.16
CACNB3-219ENST00000551544 PEX3P56589 373 aa14.05□□□□□ -0.16
CACNB3-219ENST00000551544 MYBPC2Q14324 1141 aa14.05□□□□□ -0.16
CACNB3-219ENST00000551544 PPP2R5EQ16537 467 aa14.05□□□□□ -0.16
CACNB3-219ENST00000551544 YTHDF3Q7Z739 585 aaKnown RBP14.05□□□□□ -0.16
CACNB3-219ENST00000551544 NEK9Q8TD19 979 aa14.05□□□□□ -0.16
CACNB3-219ENST00000551544 CYFIP2Q96F07 1278 aa14.05□□□□□ -0.16
CACNB3-219ENST00000551544 SMIM23A6NLE4 172 aa14.05□□□□□ -0.16
CACNB3-219ENST00000551544 DHX15O43143 795 aaKnown RBP14.05□□□□□ -0.16
CACNB3-219ENST00000551544 CYP26A1O43174 497 aa14.05□□□□□ -0.16
CACNB3-219ENST00000551544 SHBGP04278 402 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms