RNA–Protein interactions for RNA: ENST00000550863.1

CPNE8-207, Transcript of copine 8, humanhuman

TSL 4

Gene CPNE8, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-207ENST00000550863 SUSD6Q92537 303 aa12.79□□□□□ -0.36
CPNE8-207ENST00000550863 MTMR9Q96QG7 549 aa12.79□□□□□ -0.36
CPNE8-207ENST00000550863 KIF2CQ99661 725 aa12.79□□□□□ -0.36
CPNE8-207ENST00000550863 APOL6Q9BWW8 343 aa12.79□□□□□ -0.36
CPNE8-207ENST00000550863 MRPL9Q9BYD2 267 aaKnown RBP12.79□□□□□ -0.36
CPNE8-207ENST00000550863 S1PR5Q9H228 398 aa12.79□□□□□ -0.36
CPNE8-207ENST00000550863 RNF39Q9H2S5 420 aa12.79□□□□□ -0.36
CPNE8-207ENST00000550863 SMOC2Q9H3U7 446 aa12.79□□□□□ -0.36
CPNE8-207ENST00000550863 ZSWIM4Q9H7M6 989 aa12.79□□□□□ -0.36
CPNE8-207ENST00000550863 BRMS1Q9HCU9 246 aa12.79□□□□□ -0.36
CPNE8-207ENST00000550863 CHST12Q9NRB3 414 aa12.79□□□□□ -0.36
CPNE8-207ENST00000550863 USP20Q9Y2K6 914 aa12.79□□□□□ -0.36
CPNE8-207ENST00000550863 HCN4Q9Y3Q4 1203 aa12.79□□□□□ -0.36
CPNE8-207ENST00000550863 DOCK8Q8NF50 2099 aa12.79□□□□□ -0.36
CPNE8-207ENST00000550863 CLASP2O75122 1294 aaKnown RBP12.78□□□□□ -0.36
CPNE8-207ENST00000550863 MED24O75448 989 aa12.78□□□□□ -0.36
CPNE8-207ENST00000550863 EDN1P05305 212 aa12.78□□□□□ -0.36
CPNE8-207ENST00000550863 GLRA2P23416 452 aa12.78□□□□□ -0.36
CPNE8-207ENST00000550863 MLH1P40692 756 aa12.78□□□□□ -0.36
CPNE8-207ENST00000550863 RARRES1P49788 294 aa12.78□□□□□ -0.36
CPNE8-207ENST00000550863 RNASELQ05823 741 aaKnown RBP12.78□□□□□ -0.36
CPNE8-207ENST00000550863 MBTD1Q05BQ5 628 aa12.78□□□□□ -0.36
CPNE8-207ENST00000550863 SMC1AQ14683 1233 aaKnown RBP12.78□□□□□ -0.36
CPNE8-207ENST00000550863 AMHR2Q16671 573 aa12.78□□□□□ -0.36
CPNE8-207ENST00000550863 CSPP1Q1MSJ5 1256 aa12.78□□□□□ -0.36
CPNE8-207ENST00000550863 C8orf34Q49A92 452 aa12.78□□□□□ -0.36
CPNE8-207ENST00000550863 ERICH6BQ5W0A0 696 aa12.78□□□□□ -0.36
CPNE8-207ENST00000550863 POTEGQ6S5H5 508 aa12.78□□□□□ -0.36
CPNE8-207ENST00000550863 GLB1LQ6UWU2 654 aa12.78□□□□□ -0.36
CPNE8-207ENST00000550863 VPS52Q8N1B4 723 aa12.78□□□□□ -0.36
CPNE8-207ENST00000550863 TMEM169Q96HH4 297 aa12.78□□□□□ -0.36
CPNE8-207ENST00000550863 IGSF21Q96ID5 467 aa12.78□□□□□ -0.36
CPNE8-207ENST00000550863 ZFP42Q96MM3 310 aa12.78□□□□□ -0.36
CPNE8-207ENST00000550863 HSD17B14Q9BPX1 270 aa12.78□□□□□ -0.36
CPNE8-207ENST00000550863 TRAIPQ9BWF2 469 aa12.78□□□□□ -0.36
CPNE8-207ENST00000550863 POLR3FQ9H1D9 316 aaPredicted RBP12.78□□□□□ -0.36
CPNE8-207ENST00000550863 NXF3Q9H4D5 531 aaKnown RBP12.78□□□□□ -0.36
CPNE8-207ENST00000550863 RSAD1Q9HA92 442 aa12.78□□□□□ -0.36
CPNE8-207ENST00000550863 POLD4Q9HCU8 107 aa12.78□□□□□ -0.36
CPNE8-207ENST00000550863 PCDHA12Q9UN75 941 aa12.78□□□□□ -0.36
CPNE8-207ENST00000550863 TTLL13PA6NNM8 815 aa12.77□□□□□ -0.37
CPNE8-207ENST00000550863 INO80B-WBP1J3KQ70 363 aa12.77□□□□□ -0.37
CPNE8-207ENST00000550863 BAG4O95429 457 aaKnown RBP12.77□□□□□ -0.37
CPNE8-207ENST00000550863 GALTP07902 379 aa12.77□□□□□ -0.37
CPNE8-207ENST00000550863 SPATA31C1P0DKV0 1188 aa12.77□□□□□ -0.37
CPNE8-207ENST00000550863 MYBP10242 640 aa12.77□□□□□ -0.37
CPNE8-207ENST00000550863 ALADP13716 330 aa12.77□□□□□ -0.37
CPNE8-207ENST00000550863 KRT17Q04695 432 aa12.77□□□□□ -0.37
CPNE8-207ENST00000550863 CBX2Q14781 532 aaPredicted RBP12.77□□□□□ -0.37
CPNE8-207ENST00000550863 ZNF174Q15697 407 aa12.77□□□□□ -0.37
CPNE8-207ENST00000550863 HERC4Q5GLZ8 1057 aaPredicted RBP12.77□□□□□ -0.37
CPNE8-207ENST00000550863 SRGAP1Q7Z6B7 1085 aa12.77□□□□□ -0.37
CPNE8-207ENST00000550863 BSNDQ8WZ55 320 aa12.77□□□□□ -0.37
CPNE8-207ENST00000550863 RABGGTAQ92696 567 aa12.77□□□□□ -0.37
CPNE8-207ENST00000550863 FAM122AQ96E09 287 aa12.77□□□□□ -0.37
CPNE8-207ENST00000550863 POP1Q99575 1024 aaKnown RBP12.77□□□□□ -0.37
CPNE8-207ENST00000550863 CDCA3Q99618 268 aaPredicted RBP12.77□□□□□ -0.37
CPNE8-207ENST00000550863 NAP1L4Q99733 375 aaKnown RBP12.77□□□□□ -0.37
CPNE8-207ENST00000550863 JPH2Q9BR39 696 aaPredicted RBP12.77□□□□□ -0.37
CPNE8-207ENST00000550863 PHF7Q9BWX1 381 aaPredicted RBP12.77□□□□□ -0.37
CPNE8-207ENST00000550863 INO80BQ9C086 356 aaPredicted RBP12.77□□□□□ -0.37
CPNE8-207ENST00000550863 CXCL16Q9H2A7 254 aa12.77□□□□□ -0.37
CPNE8-207ENST00000550863 POMKQ9H5K3 350 aa12.77□□□□□ -0.37
CPNE8-207ENST00000550863 TSHZ2Q9NRE2 1034 aa12.77□□□□□ -0.37
CPNE8-207ENST00000550863 RNF216Q9NWF9 866 aaPredicted RBP12.77□□□□□ -0.37
CPNE8-207ENST00000550863 MARCH5Q9NX47 278 aa12.77□□□□□ -0.37
CPNE8-207ENST00000550863 MIOSQ9NXC5 875 aa12.77□□□□□ -0.37
CPNE8-207ENST00000550863 PUF60Q9UHX1 559 aaKnown RBP12.77□□□□□ -0.37
CPNE8-207ENST00000550863 PRG3Q9Y2Y8 225 aaPredicted RBP12.77□□□□□ -0.37
CPNE8-207ENST00000550863 IPPQ9Y573 584 aa12.77□□□□□ -0.37
CPNE8-207ENST00000550863 CITO14578 2027 aa12.76□□□□□ -0.37
CPNE8-207ENST00000550863 DKC1O60832 514 aaKnown RBP eCLIP12.76□□□□□ -0.37
CPNE8-207ENST00000550863 ERLIN2O94905 339 aa12.76□□□□□ -0.37
CPNE8-207ENST00000550863 ARF4P18085 180 aaPredicted RBP12.76□□□□□ -0.37
CPNE8-207ENST00000550863 ALDH7A1P49419 539 aaKnown RBP12.76□□□□□ -0.37
CPNE8-207ENST00000550863 RAB27AP51159 221 aa12.76□□□□□ -0.37
CPNE8-207ENST00000550863 SCNN1GP51170 649 aa12.76□□□□□ -0.37
CPNE8-207ENST00000550863 PTENP60484 403 aa12.76□□□□□ -0.37
CPNE8-207ENST00000550863 TRIM29Q14134 588 aa12.76□□□□□ -0.37
CPNE8-207ENST00000550863 PTPN14Q15678 1187 aa12.76□□□□□ -0.37
CPNE8-207ENST00000550863 ECM1Q16610 540 aa12.76□□□□□ -0.37
CPNE8-207ENST00000550863 RARS2Q5T160 578 aaKnown RBP12.76□□□□□ -0.37
CPNE8-207ENST00000550863 ZNF710Q8N1W2 664 aa12.76□□□□□ -0.37
CPNE8-207ENST00000550863 MRPL43Q8N983 215 aaKnown RBP12.76□□□□□ -0.37
CPNE8-207ENST00000550863 B3GALT6Q96L58 329 aa12.76□□□□□ -0.37
CPNE8-207ENST00000550863 GAD1Q99259 594 aa12.76□□□□□ -0.37
CPNE8-207ENST00000550863 NGRNQ9NPE2 291 aaKnown RBP12.76□□□□□ -0.37
CPNE8-207ENST00000550863 C2CD4DB7Z1M9 353 aa12.75□□□□□ -0.37
CPNE8-207ENST00000550863 C2CD2LO14523 706 aa12.75□□□□□ -0.37
CPNE8-207ENST00000550863 ZNF623O75123 536 aa12.75□□□□□ -0.37
CPNE8-207ENST00000550863 LYPLA2O95372 231 aa12.75□□□□□ -0.37
CPNE8-207ENST00000550863 NPTXRO95502 500 aa12.75□□□□□ -0.37
CPNE8-207ENST00000550863 CXCL14O95715 111 aa12.75□□□□□ -0.37
CPNE8-207ENST00000550863 PDGFBP01127 241 aaPredicted RBP12.75□□□□□ -0.37
CPNE8-207ENST00000550863 CTSAP10619 480 aa12.75□□□□□ -0.37
CPNE8-207ENST00000550863 AKAP5P24588 427 aa12.75□□□□□ -0.37
CPNE8-207ENST00000550863 ARL2P36404 184 aa12.75□□□□□ -0.37
CPNE8-207ENST00000550863 COL4A3Q01955 1670 aa12.75□□□□□ -0.37
CPNE8-207ENST00000550863 PDE12Q6L8Q7 609 aaKnown RBP12.75□□□□□ -0.37
CPNE8-207ENST00000550863 TMEM184AQ6ZMB5 413 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms