RNA–Protein interactions for RNA: ENST00000550620.1

PDE1B-207, Transcript of phosphodiesterase 1B, humanhuman

TSL 1 (best) BASIC

Gene PDE1B, Length 2,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-207ENST00000550620 FAM86B1E9PN63 330 aa16.18■□□□□ 0.18
PDE1B-207ENST00000550620 MSH4O15457 936 aa16.18■□□□□ 0.18
PDE1B-207ENST00000550620 RAD21O60216 631 aa16.18■□□□□ 0.18
PDE1B-207ENST00000550620 OAS1P00973 400 aaKnown RBP16.18■□□□□ 0.18
PDE1B-207ENST00000550620 FAM86B2P0C5J1 330 aa16.18■□□□□ 0.18
PDE1B-207ENST00000550620 CHRM1P11229 460 aaPredicted RBP16.18■□□□□ 0.18
PDE1B-207ENST00000550620 NMT1P30419 496 aaKnown RBP16.18■□□□□ 0.18
PDE1B-207ENST00000550620 TUFT1Q9NNX1 390 aa16.18■□□□□ 0.18
PDE1B-207ENST00000550620 DDX4Q9NQI0 724 aaKnown RBP16.18■□□□□ 0.18
PDE1B-207ENST00000550620 BATF3Q9NR55 127 aa16.18■□□□□ 0.18
PDE1B-207ENST00000550620 ABCF3Q9NUQ8 709 aa16.18■□□□□ 0.18
PDE1B-207ENST00000550620 PCDHA3Q9Y5H8 950 aa16.18■□□□□ 0.18
PDE1B-207ENST00000550620 NRAPQ86VF7 1730 aa16.18■□□□□ 0.18
PDE1B-207ENST00000550620 SFI1A8K8P3 1242 aa16.17■□□□□ 0.18
PDE1B-207ENST00000550620 O00370 1275 aa16.17■□□□□ 0.18
PDE1B-207ENST00000550620 ZNF76P36508 570 aa16.17■□□□□ 0.18
PDE1B-207ENST00000550620 COILP38432 576 aaPredicted RBP16.17■□□□□ 0.18
PDE1B-207ENST00000550620 CYP2J2P51589 502 aa16.17■□□□□ 0.18
PDE1B-207ENST00000550620 CETN1Q12798 172 aa16.17■□□□□ 0.18
PDE1B-207ENST00000550620 TTC27Q6P3X3 843 aa16.17■□□□□ 0.18
PDE1B-207ENST00000550620 UHMK1Q8TAS1 419 aaKnown RBP16.17■□□□□ 0.18
PDE1B-207ENST00000550620 IFT74Q96LB3 600 aa16.17■□□□□ 0.18
PDE1B-207ENST00000550620 AGPAT3Q9NRZ7 376 aa16.17■□□□□ 0.18
PDE1B-207ENST00000550620 DMAC2Q9NW81 257 aa16.17■□□□□ 0.18
PDE1B-207ENST00000550620 TMEM110-MUSTN1A8MSY1 372 aa16.17■□□□□ 0.18
PDE1B-207ENST00000550620 LRRN2O75325 713 aa16.17■□□□□ 0.18
PDE1B-207ENST00000550620 UBOX5O94941 541 aa16.17■□□□□ 0.18
PDE1B-207ENST00000550620 FTLP02792 175 aaPredicted RBP16.17■□□□□ 0.18
PDE1B-207ENST00000550620 RPSAP08865 295 aaKnown RBP16.17■□□□□ 0.18
PDE1B-207ENST00000550620 ALADP13716 330 aa16.17■□□□□ 0.18
PDE1B-207ENST00000550620 MAP2K1Q02750 393 aaPredicted RBP16.17■□□□□ 0.18
PDE1B-207ENST00000550620 BFSP1Q12934 665 aa16.17■□□□□ 0.18
PDE1B-207ENST00000550620 SLFN13Q68D06 897 aa16.17■□□□□ 0.18
PDE1B-207ENST00000550620 AADACL2Q6P093 401 aa16.17■□□□□ 0.18
PDE1B-207ENST00000550620 EXOC3L1Q86VI1 746 aa16.17■□□□□ 0.18
PDE1B-207ENST00000550620 MAB21L3Q8N8X9 362 aa16.17■□□□□ 0.18
PDE1B-207ENST00000550620 KRT35Q92764 455 aa16.17■□□□□ 0.18
PDE1B-207ENST00000550620 SERPINB12Q96P63 405 aa16.17■□□□□ 0.18
PDE1B-207ENST00000550620 ECT2Q9H8V3 914 aa16.17■□□□□ 0.18
PDE1B-207ENST00000550620 NOP53Q9NZM5 478 aaKnown RBP16.17■□□□□ 0.18
PDE1B-207ENST00000550620 FOCADQ5VW36 1801 aa16.16■□□□□ 0.18
PDE1B-207ENST00000550620 FOXN3O00409 490 aaPredicted RBP16.16■□□□□ 0.18
PDE1B-207ENST00000550620 RTN2O75298 545 aa16.16■□□□□ 0.18
PDE1B-207ENST00000550620 ECEL1O95672 775 aa16.16■□□□□ 0.18
PDE1B-207ENST00000550620 TRIM49P0CI25 452 aa16.16■□□□□ 0.18
PDE1B-207ENST00000550620 TRIM49CP0CI26 452 aa16.16■□□□□ 0.18
PDE1B-207ENST00000550620 RARAP10276 462 aa16.16■□□□□ 0.18
PDE1B-207ENST00000550620 NCALDP61601 193 aa16.16■□□□□ 0.18
PDE1B-207ENST00000550620 SF3A3Q12874 501 aaKnown RBP eCLIP16.16■□□□□ 0.18
PDE1B-207ENST00000550620 NAA25Q14CX7 972 aa16.16■□□□□ 0.18
PDE1B-207ENST00000550620 GALNTL6Q49A17 601 aa16.16■□□□□ 0.18
PDE1B-207ENST00000550620 ZC2HC1CQ53FD0 456 aaPredicted RBP16.16■□□□□ 0.18
PDE1B-207ENST00000550620 C1orf186Q6ZWK4 172 aa16.16■□□□□ 0.18
PDE1B-207ENST00000550620 PALB2Q86YC2 1186 aa16.16■□□□□ 0.18
PDE1B-207ENST00000550620 FAM178BQ8IXR5 827 aa16.16■□□□□ 0.18
PDE1B-207ENST00000550620 STAMBPL1Q96FJ0 436 aa16.16■□□□□ 0.18
PDE1B-207ENST00000550620 MTFR1LQ9H019 292 aa16.16■□□□□ 0.18
PDE1B-207ENST00000550620 RGL1Q9NZL6 768 aa16.16■□□□□ 0.18
PDE1B-207ENST00000550620 DBR1Q9UK59 544 aaKnown RBP16.16■□□□□ 0.18
PDE1B-207ENST00000550620 C15orf41Q9Y2V0 281 aa16.16■□□□□ 0.18
PDE1B-207ENST00000550620 CD2APQ9Y5K6 639 aa16.16■□□□□ 0.18
PDE1B-207ENST00000550620 MTA2O94776 668 aa16.16■□□□□ 0.18
PDE1B-207ENST00000550620 COMTP21964 271 aa16.16■□□□□ 0.18
PDE1B-207ENST00000550620 PEX5P50542 639 aa16.16■□□□□ 0.18
PDE1B-207ENST00000550620 GTF2IP78347 998 aa16.16■□□□□ 0.18
PDE1B-207ENST00000550620 MYO1EQ12965 1108 aa16.16■□□□□ 0.18
PDE1B-207ENST00000550620 PHLDB3Q6NSJ2 640 aa16.16■□□□□ 0.18
PDE1B-207ENST00000550620 ZNF720Q7Z2F6 126 aa16.16■□□□□ 0.18
PDE1B-207ENST00000550620 FBXO11Q86XK2 927 aa16.16■□□□□ 0.18
PDE1B-207ENST00000550620 SLC13A5Q86YT5 568 aaPredicted RBP16.16■□□□□ 0.18
PDE1B-207ENST00000550620 NSMCE1Q8WV22 266 aa16.16■□□□□ 0.18
PDE1B-207ENST00000550620 MKL1Q969V6 931 aa16.16■□□□□ 0.18
PDE1B-207ENST00000550620 RBM17Q96I25 401 aaKnown RBP16.16■□□□□ 0.18
PDE1B-207ENST00000550620 BCAS3Q9H6U6 928 aa16.16■□□□□ 0.18
PDE1B-207ENST00000550620 USP40Q9NVE5 1235 aa16.16■□□□□ 0.18
PDE1B-207ENST00000550620 AGAP1Q9UPQ3 857 aa16.16■□□□□ 0.18
PDE1B-207ENST00000550620 TCP11X1B4DZS4 312 aa16.15■□□□□ 0.18
PDE1B-207ENST00000550620 EXOC3O60645 756 aa16.15■□□□□ 0.18
PDE1B-207ENST00000550620 ANP32DO95626 131 aa16.15■□□□□ 0.18
PDE1B-207ENST00000550620 CCND1P24385 295 aa16.15■□□□□ 0.18
PDE1B-207ENST00000550620 MARCKSL1P49006 195 aa16.15■□□□□ 0.18
PDE1B-207ENST00000550620 COPS2P61201 443 aa16.15■□□□□ 0.18
PDE1B-207ENST00000550620 MKRN3Q13064 507 aaKnown RBP16.15■□□□□ 0.18
PDE1B-207ENST00000550620 MYBPC2Q14324 1141 aa16.15■□□□□ 0.18
PDE1B-207ENST00000550620 MESDQ14696 234 aa16.15■□□□□ 0.18
PDE1B-207ENST00000550620 COG2Q14746 738 aa16.15■□□□□ 0.18
PDE1B-207ENST00000550620 ACCSLQ4AC99 568 aa16.15■□□□□ 0.18
PDE1B-207ENST00000550620 CHADLQ6NUI6 762 aa16.15■□□□□ 0.18
PDE1B-207ENST00000550620 CCDC25Q86WR0 208 aa16.15■□□□□ 0.18
PDE1B-207ENST00000550620 SLC9A9Q8IVB4 645 aa16.15■□□□□ 0.18
PDE1B-207ENST00000550620 C12orf50Q8NA57 414 aaPredicted RBP16.15■□□□□ 0.18
PDE1B-207ENST00000550620 BANK1Q8NDB2 785 aa16.15■□□□□ 0.18
PDE1B-207ENST00000550620 TBC1D16Q8TBP0 767 aa16.15■□□□□ 0.18
PDE1B-207ENST00000550620 PIGOQ8TEQ8 1089 aa16.15■□□□□ 0.18
PDE1B-207ENST00000550620 ARHGEF2Q92974 986 aaKnown RBP16.15■□□□□ 0.18
PDE1B-207ENST00000550620 P2RX7Q99572 595 aaKnown RBP16.15■□□□□ 0.18
PDE1B-207ENST00000550620 PLVAPQ9BX97 442 aa16.15■□□□□ 0.18
PDE1B-207ENST00000550620 KCND2Q9NZV8 630 aa16.15■□□□□ 0.18
PDE1B-207ENST00000550620 NYAP2Q9P242 653 aa16.15■□□□□ 0.18
PDE1B-207ENST00000550620 ARL2BPQ9Y2Y0 163 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms