RNA–Protein interactions for RNA: ENST00000550536.5

RAB3IP-212, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 9,646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-212ENST00000550536 NECTIN1Q15223 517 aa13.29□□□□□ -0.28
RAB3IP-212ENST00000550536 C16orf87Q6PH81 154 aa13.29□□□□□ -0.28
RAB3IP-212ENST00000550536 STRBPQ96SI9 672 aaKnown RBP13.29□□□□□ -0.28
RAB3IP-212ENST00000550536 GCLMP48507 274 aa13.29□□□□□ -0.28
RAB3IP-212ENST00000550536 LY9Q9HBG7 655 aa13.29□□□□□ -0.28
RAB3IP-212ENST00000550536 NDE1Q9NXR1 346 aa13.29□□□□□ -0.28
RAB3IP-212ENST00000550536 PIM2Q9P1W9 311 aa13.29□□□□□ -0.28
RAB3IP-212ENST00000550536 G3BP2Q9UN86 482 aaKnown RBP13.29□□□□□ -0.28
RAB3IP-212ENST00000550536 SYF2O95926 243 aaKnown RBP13.29□□□□□ -0.28
RAB3IP-212ENST00000550536 WRNIP1Q96S55 665 aa13.29□□□□□ -0.28
RAB3IP-212ENST00000550536 OSBPL9Q96SU4 736 aa13.29□□□□□ -0.28
RAB3IP-212ENST00000550536 FAM213AQ9BRX8 229 aa13.29□□□□□ -0.28
RAB3IP-212ENST00000550536 KDM4CQ9H3R0 1056 aa13.29□□□□□ -0.28
RAB3IP-212ENST00000550536 C1orf146Q5VVC0 180 aa13.29□□□□□ -0.28
RAB3IP-212ENST00000550536 LXNQ9BS40 222 aa13.29□□□□□ -0.28
RAB3IP-212ENST00000550536 LRRC53A6NM62 1247 aa13.29□□□□□ -0.28
RAB3IP-212ENST00000550536 PRCPP42785 496 aa13.29□□□□□ -0.28
RAB3IP-212ENST00000550536 ENAHQ8N8S7 591 aaPredicted RBP13.29□□□□□ -0.28
RAB3IP-212ENST00000550536 SPATA33Q96N06 139 aa13.29□□□□□ -0.28
RAB3IP-212ENST00000550536 AIFM3Q96NN9 605 aa13.29□□□□□ -0.28
RAB3IP-212ENST00000550536 M0QYV0 167 aa13.29□□□□□ -0.28
RAB3IP-212ENST00000550536 ZFXP17010 805 aaPredicted RBP13.29□□□□□ -0.28
RAB3IP-212ENST00000550536 SDC4P31431 198 aa13.29□□□□□ -0.28
RAB3IP-212ENST00000550536 TTLL11Q8NHH1 800 aa13.29□□□□□ -0.28
RAB3IP-212ENST00000550536 SRP68Q9UHB9 627 aaKnown RBP13.29□□□□□ -0.28
RAB3IP-212ENST00000550536 GGPS1O95749 300 aa13.28□□□□□ -0.28
RAB3IP-212ENST00000550536 DDX5P17844 614 aaKnown RBP13.28□□□□□ -0.28
RAB3IP-212ENST00000550536 KCNQ4P56696 695 aa13.28□□□□□ -0.28
RAB3IP-212ENST00000550536 PTK2BQ14289 1009 aa13.28□□□□□ -0.28
RAB3IP-212ENST00000550536 BARHL2Q9NY43 387 aa13.28□□□□□ -0.28
RAB3IP-212ENST00000550536 MROH7-TTC4A0A0A0MT08 1334 aa13.28□□□□□ -0.28
RAB3IP-212ENST00000550536 PPLO60437 1756 aa13.28□□□□□ -0.28
RAB3IP-212ENST00000550536 TFDP2Q14188 446 aa13.28□□□□□ -0.28
RAB3IP-212ENST00000550536 EFTUD2Q15029 972 aaKnown RBP eCLIP13.28□□□□□ -0.28
RAB3IP-212ENST00000550536 ZNF394Q53GI3 561 aa13.28□□□□□ -0.28
RAB3IP-212ENST00000550536 ULK4Q96C45 1275 aa13.28□□□□□ -0.28
RAB3IP-212ENST00000550536 TGS1Q96RS0 853 aaKnown RBP13.28□□□□□ -0.28
RAB3IP-212ENST00000550536 ABCB6Q9NP58 842 aa13.28□□□□□ -0.28
RAB3IP-212ENST00000550536 SLC9A2Q9UBY0 812 aa13.28□□□□□ -0.28
RAB3IP-212ENST00000550536 DNAJC6O75061 913 aa13.28□□□□□ -0.28
RAB3IP-212ENST00000550536 MYCP01106 439 aaPredicted RBP13.28□□□□□ -0.28
RAB3IP-212ENST00000550536 EFHC2Q5JST6 749 aa13.28□□□□□ -0.28
RAB3IP-212ENST00000550536 TEDDM1Q5T9Z0 273 aa13.28□□□□□ -0.28
RAB3IP-212ENST00000550536 ENOSF1Q7L5Y1 443 aa13.28□□□□□ -0.28
RAB3IP-212ENST00000550536 NME3Q13232 169 aa13.28□□□□□ -0.28
RAB3IP-212ENST00000550536 SFR1Q86XK3 245 aa13.28□□□□□ -0.28
RAB3IP-212ENST00000550536 THNSL1Q8IYQ7 743 aa13.28□□□□□ -0.28
RAB3IP-212ENST00000550536 RUBCNQ92622 972 aa13.28□□□□□ -0.28
RAB3IP-212ENST00000550536 POTEFA5A3E0 1075 aa13.28□□□□□ -0.28
RAB3IP-212ENST00000550536 POTEIP0CG38 1075 aa13.28□□□□□ -0.28
RAB3IP-212ENST00000550536 POTEGQ6S5H5 508 aa13.28□□□□□ -0.28
RAB3IP-212ENST00000550536 POTEEQ6S8J3 1075 aa13.28□□□□□ -0.28
RAB3IP-212ENST00000550536 ADGRF4Q8IZF3 695 aa13.28□□□□□ -0.28
RAB3IP-212ENST00000550536 EPAS1Q99814 870 aa13.28□□□□□ -0.28
RAB3IP-212ENST00000550536 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.28□□□□□ -0.28
RAB3IP-212ENST00000550536 EDEM3Q9BZQ6 932 aa13.28□□□□□ -0.28
RAB3IP-212ENST00000550536 PARVAQ9NVD7 372 aa13.28□□□□□ -0.28
RAB3IP-212ENST00000550536 FOXD4Q12950 439 aaPredicted RBP13.28□□□□□ -0.28
RAB3IP-212ENST00000550536 NBPF9Q3BBW0 867 aa13.28□□□□□ -0.28
RAB3IP-212ENST00000550536 GAS2L3Q86XJ1 694 aa13.28□□□□□ -0.28
RAB3IP-212ENST00000550536 CDV3Q9UKY7 258 aaKnown RBP13.28□□□□□ -0.28
RAB3IP-212ENST00000550536 PI4K2BG5E9Z4 385 aa13.28□□□□□ -0.28
RAB3IP-212ENST00000550536 PPP1R12AO14974 1030 aaPredicted RBP13.28□□□□□ -0.28
RAB3IP-212ENST00000550536 PNMA6AP0CW24 399 aaPredicted RBP13.28□□□□□ -0.28
RAB3IP-212ENST00000550536 ATP1A3P13637 1013 aa13.28□□□□□ -0.28
RAB3IP-212ENST00000550536 COPB2P35606 906 aa13.28□□□□□ -0.28
RAB3IP-212ENST00000550536 QARSP47897 775 aaKnown RBP13.28□□□□□ -0.28
RAB3IP-212ENST00000550536 FLOT2Q14254 428 aa13.28□□□□□ -0.28
RAB3IP-212ENST00000550536 TRIML2Q8N7C3 387 aa13.28□□□□□ -0.28
RAB3IP-212ENST00000550536 SARS2Q9NP81 518 aaKnown RBP13.28□□□□□ -0.28
RAB3IP-212ENST00000550536 NFX1Q12986 1120 aaKnown RBP13.27□□□□□ -0.28
RAB3IP-212ENST00000550536 SEMA3FQ13275 785 aa13.27□□□□□ -0.28
RAB3IP-212ENST00000550536 ZNF335Q9H4Z2 1342 aaPredicted RBP13.27□□□□□ -0.28
RAB3IP-212ENST00000550536 FCER1AP12319 257 aa13.27□□□□□ -0.28
RAB3IP-212ENST00000550536 HADHAP40939 763 aa13.27□□□□□ -0.28
RAB3IP-212ENST00000550536 PSMC1P62191 440 aaKnown RBP13.27□□□□□ -0.28
RAB3IP-212ENST00000550536 SUSD4Q5VX71 490 aa13.27□□□□□ -0.28
RAB3IP-212ENST00000550536 DFFAO00273 331 aa13.27□□□□□ -0.28
RAB3IP-212ENST00000550536 RCSD1Q6JBY9 416 aa13.27□□□□□ -0.28
RAB3IP-212ENST00000550536 PDXDC1Q6P996 788 aa13.27□□□□□ -0.28
RAB3IP-212ENST00000550536 APOL1O14791 398 aa13.27□□□□□ -0.29
RAB3IP-212ENST00000550536 MAP3K20Q9NYL2 800 aaKnown RBP13.27□□□□□ -0.29
RAB3IP-212ENST00000550536 ITM2BQ9Y287 266 aa13.27□□□□□ -0.29
RAB3IP-212ENST00000550536 USP17L15C9J2P7 530 aa13.27□□□□□ -0.29
RAB3IP-212ENST00000550536 USP17L13C9JLJ4 530 aa13.27□□□□□ -0.29
RAB3IP-212ENST00000550536 USP17L11C9JVI0 530 aa13.27□□□□□ -0.29
RAB3IP-212ENST00000550536 USP17L18D6R9N7 530 aa13.27□□□□□ -0.29
RAB3IP-212ENST00000550536 USP17L22D6RA61 530 aa13.27□□□□□ -0.29
RAB3IP-212ENST00000550536 USP17L17D6RBQ6 530 aa13.27□□□□□ -0.29
RAB3IP-212ENST00000550536 USP17L19D6RCP7 530 aa13.27□□□□□ -0.29
RAB3IP-212ENST00000550536 USP17L20D6RJB6 530 aa13.27□□□□□ -0.29
RAB3IP-212ENST00000550536 USP17L24Q0WX57 530 aa13.27□□□□□ -0.29
RAB3IP-212ENST00000550536 GRM4Q14833 912 aa13.27□□□□□ -0.29
RAB3IP-212ENST00000550536 USP17L6PQ6QN14 398 aa13.27□□□□□ -0.29
RAB3IP-212ENST00000550536 SARM1Q6SZW1 724 aa13.27□□□□□ -0.29
RAB3IP-212ENST00000550536 JPH1Q9HDC5 661 aaPredicted RBP13.27□□□□□ -0.29
RAB3IP-212ENST00000550536 SLC16A4O15374 487 aa13.27□□□□□ -0.29
RAB3IP-212ENST00000550536 MAN1A2O60476 641 aa13.27□□□□□ -0.29
RAB3IP-212ENST00000550536 CHRNA3P32297 505 aa13.27□□□□□ -0.29
RAB3IP-212ENST00000550536 ICA1LQ8NDH6 482 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms