RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 FAN1Q9Y2M0 1017 aa25.78■■□□□ 1.72
SMARCD1-209ENST00000550477 ERLIN2O94905 339 aa25.77■■□□□ 1.72
SMARCD1-209ENST00000550477 KLRC2P26717 231 aa25.77■■□□□ 1.72
SMARCD1-209ENST00000550477 YWHABP31946 246 aaKnown RBP25.77■■□□□ 1.72
SMARCD1-209ENST00000550477 KIAA1841Q6NSI8 718 aa25.77■■□□□ 1.72
SMARCD1-209ENST00000550477 PIK3AP1Q6ZUJ8 805 aa25.77■■□□□ 1.72
SMARCD1-209ENST00000550477 TMEM143Q96AN5 459 aa25.77■■□□□ 1.72
SMARCD1-209ENST00000550477 TMEM175Q9BSA9 504 aa25.77■■□□□ 1.72
SMARCD1-209ENST00000550477 ZSWIM4Q9H7M6 989 aa25.77■■□□□ 1.72
SMARCD1-209ENST00000550477 VAV3Q9UKW4 847 aa25.77■■□□□ 1.72
SMARCD1-209ENST00000550477 STK36Q9NRP7 1315 aa25.77■■□□□ 1.72
SMARCD1-209ENST00000550477 C2CD4DB7Z1M9 353 aa25.76■■□□□ 1.71
SMARCD1-209ENST00000550477 LAMTOR4Q0VGL1 99 aa25.76■■□□□ 1.71
SMARCD1-209ENST00000550477 ELMSAN1Q6PJG2 1045 aa25.76■■□□□ 1.71
SMARCD1-209ENST00000550477 MRPL10Q7Z7H8 261 aaKnown RBP25.76■■□□□ 1.71
SMARCD1-209ENST00000550477 AUTS2Q8WXX7 1259 aa25.76■■□□□ 1.71
SMARCD1-209ENST00000550477 ACSF2Q96CM8 615 aaPredicted RBP25.76■■□□□ 1.71
SMARCD1-209ENST00000550477 LXNQ9BS40 222 aa25.76■■□□□ 1.71
SMARCD1-209ENST00000550477 MRPL17Q9NRX2 175 aaKnown RBP25.76■■□□□ 1.71
SMARCD1-209ENST00000550477 DPP7Q9UHL4 492 aa25.76■■□□□ 1.71
SMARCD1-209ENST00000550477 AXLP30530 894 aa25.75■■□□□ 1.71
SMARCD1-209ENST00000550477 SLC11A1P49279 550 aa25.75■■□□□ 1.71
SMARCD1-209ENST00000550477 SCRN1Q12765 414 aa25.75■■□□□ 1.71
SMARCD1-209ENST00000550477 MXD4Q14582 209 aaPredicted RBP25.75■■□□□ 1.71
SMARCD1-209ENST00000550477 ANKRD1Q15327 319 aa25.75■■□□□ 1.71
SMARCD1-209ENST00000550477 XKR9Q5GH70 373 aa25.75■■□□□ 1.71
SMARCD1-209ENST00000550477 NCAPH2Q6IBW4 605 aa25.75■■□□□ 1.71
SMARCD1-209ENST00000550477 TMEM173Q86WV6 379 aaPredicted RBP25.75■■□□□ 1.71
SMARCD1-209ENST00000550477 ZDHHC14Q8IZN3 488 aa25.75■■□□□ 1.71
SMARCD1-209ENST00000550477 RNF149Q8NC42 400 aa25.75■■□□□ 1.71
SMARCD1-209ENST00000550477 MTRQ99707 1265 aa25.75■■□□□ 1.71
SMARCD1-209ENST00000550477 SFXN1Q9H9B4 322 aa25.75■■□□□ 1.71
SMARCD1-209ENST00000550477 DNAJB4Q9UDY4 337 aa25.75■■□□□ 1.71
SMARCD1-209ENST00000550477 NR1I2O75469 434 aa25.74■■□□□ 1.71
SMARCD1-209ENST00000550477 EPCAMP16422 314 aa25.74■■□□□ 1.71
SMARCD1-209ENST00000550477 TFDP1Q14186 410 aa25.74■■□□□ 1.71
SMARCD1-209ENST00000550477 EMC2Q15006 297 aa25.74■■□□□ 1.71
SMARCD1-209ENST00000550477 AGMOQ6ZNB7 445 aa25.74■■□□□ 1.71
SMARCD1-209ENST00000550477 FERMT3Q86UX7 667 aa25.74■■□□□ 1.71
SMARCD1-209ENST00000550477 C12orf76Q8N812 135 aaPredicted RBP25.74■■□□□ 1.71
SMARCD1-209ENST00000550477 SLC22A17Q8WUG5 538 aa25.74■■□□□ 1.71
SMARCD1-209ENST00000550477 CCDC43Q96MW1 224 aaKnown RBP25.74■■□□□ 1.71
SMARCD1-209ENST00000550477 MEIS3P2A8K0S8 358 aa25.73■■□□□ 1.71
SMARCD1-209ENST00000550477 ITGA4P13612 1032 aa25.73■■□□□ 1.71
SMARCD1-209ENST00000550477 NCLP19338 710 aaKnown RBP25.73■■□□□ 1.71
SMARCD1-209ENST00000550477 TCF15Q12870 199 aa25.73■■□□□ 1.71
SMARCD1-209ENST00000550477 ZNF280BQ86YH2 543 aa25.73■■□□□ 1.71
SMARCD1-209ENST00000550477 TPH2Q8IWU9 490 aa25.73■■□□□ 1.71
SMARCD1-209ENST00000550477 HACE1Q8IYU2 909 aa25.73■■□□□ 1.71
SMARCD1-209ENST00000550477 ATOH1Q92858 354 aaPredicted RBP25.73■■□□□ 1.71
SMARCD1-209ENST00000550477 LIMD1Q9UGP4 676 aa25.73■■□□□ 1.71
SMARCD1-209ENST00000550477 PFKFB2O60825 505 aa25.72■■□□□ 1.71
SMARCD1-209ENST00000550477 WEE2P0C1S8 567 aa25.72■■□□□ 1.71
SMARCD1-209ENST00000550477 VCPP55072 806 aaKnown RBP25.72■■□□□ 1.71
SMARCD1-209ENST00000550477 PTPN14Q15678 1187 aa25.72■■□□□ 1.71
SMARCD1-209ENST00000550477 NOTUMQ6P988 496 aa25.72■■□□□ 1.71
SMARCD1-209ENST00000550477 TMC5Q6UXY8 1006 aa25.72■■□□□ 1.71
SMARCD1-209ENST00000550477 OTOP3Q7RTS5 596 aa25.72■■□□□ 1.71
SMARCD1-209ENST00000550477 HAS1Q92839 578 aa25.72■■□□□ 1.71
SMARCD1-209ENST00000550477 CCDC51Q96ER9 411 aa25.72■■□□□ 1.71
SMARCD1-209ENST00000550477 DYDC2Q96IM9 177 aa25.72■■□□□ 1.71
SMARCD1-209ENST00000550477 MFSD1Q9H3U5 465 aa25.72■■□□□ 1.71
SMARCD1-209ENST00000550477 ORC3Q9UBD5 711 aaPredicted RBP25.72■■□□□ 1.71
SMARCD1-209ENST00000550477 CDH22Q9UJ99 828 aa25.72■■□□□ 1.71
SMARCD1-209ENST00000550477 TRIOO75962 3097 aa25.71■■□□□ 1.71
SMARCD1-209ENST00000550477 SSBP05455 408 aaKnown RBP eCLIP25.71■■□□□ 1.71
SMARCD1-209ENST00000550477 URODP06132 367 aa25.71■■□□□ 1.71
SMARCD1-209ENST00000550477 KRT2P35908 639 aa25.71■■□□□ 1.71
SMARCD1-209ENST00000550477 CTTNQ14247 550 aaKnown RBP25.71■■□□□ 1.71
SMARCD1-209ENST00000550477 CCDC149Q6ZUS6 474 aa25.71■■□□□ 1.71
SMARCD1-209ENST00000550477 ZNF579Q8NAF0 562 aaKnown RBP25.71■■□□□ 1.71
SMARCD1-209ENST00000550477 KLHL5Q96PQ7 755 aa25.71■■□□□ 1.71
SMARCD1-209ENST00000550477 BMP2KQ9NSY1 1161 aaPredicted RBP25.71■■□□□ 1.71
SMARCD1-209ENST00000550477 RGL1Q9NZL6 768 aa25.71■■□□□ 1.71
SMARCD1-209ENST00000550477 PCDHA12Q9UN75 941 aa25.71■■□□□ 1.71
SMARCD1-209ENST00000550477 NRP1O14786 923 aa25.7■■□□□ 1.7
SMARCD1-209ENST00000550477 DDHD2O94830 711 aa25.7■■□□□ 1.7
SMARCD1-209ENST00000550477 BRD1O95696 1058 aa25.7■■□□□ 1.7
SMARCD1-209ENST00000550477 POMCP01189 267 aa25.7■■□□□ 1.7
SMARCD1-209ENST00000550477 HOXA11P31270 313 aaPredicted RBP25.7■■□□□ 1.7
SMARCD1-209ENST00000550477 CYP4A11Q02928 519 aa25.7■■□□□ 1.7
SMARCD1-209ENST00000550477 POU5F1BQ06416 359 aa25.7■■□□□ 1.7
SMARCD1-209ENST00000550477 GPR149Q86SP6 731 aa25.7■■□□□ 1.7
SMARCD1-209ENST00000550477 POTEDQ86YR6 584 aa25.7■■□□□ 1.7
SMARCD1-209ENST00000550477 TRIM6Q9C030 488 aaPredicted RBP25.7■■□□□ 1.7
SMARCD1-209ENST00000550477 MINDY3Q9H8M7 445 aa25.7■■□□□ 1.7
SMARCD1-209ENST00000550477 WRAP73Q9P2S5 460 aaPredicted RBP25.7■■□□□ 1.7
SMARCD1-209ENST00000550477 INO80B-WBP1J3KQ70 363 aa25.69■■□□□ 1.7
SMARCD1-209ENST00000550477 ST18O60284 1047 aa25.69■■□□□ 1.7
SMARCD1-209ENST00000550477 SOD2P04179 222 aa25.69■■□□□ 1.7
SMARCD1-209ENST00000550477 ADH1AP07327 375 aa25.69■■□□□ 1.7
SMARCD1-209ENST00000550477 OR1G1P47890 313 aa25.69■■□□□ 1.7
SMARCD1-209ENST00000550477 BCL7CQ8WUZ0 217 aaPredicted RBP25.69■■□□□ 1.7
SMARCD1-209ENST00000550477 TPCN1Q9ULQ1 816 aa25.69■■□□□ 1.7
SMARCD1-209ENST00000550477 KMT2EQ8IZD2 1858 aa25.68■■□□□ 1.7
SMARCD1-209ENST00000550477 DGAT1O75907 488 aa25.68■■□□□ 1.7
SMARCD1-209ENST00000550477 CNPP09543 421 aaKnown RBP25.68■■□□□ 1.7
SMARCD1-209ENST00000550477 CLCN4P51793 760 aa25.68■■□□□ 1.7
SMARCD1-209ENST00000550477 AK2P54819 239 aa25.68■■□□□ 1.7
SMARCD1-209ENST00000550477 PTENP60484 403 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms