RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 FAM47DPA6NHR8 397 aa16.82■□□□□ 0.28
RBFOX1-212ENST00000550418 FOXP2O15409 715 aa16.82■□□□□ 0.28
RBFOX1-212ENST00000550418 ATP2B4P23634 1241 aa16.82■□□□□ 0.28
RBFOX1-212ENST00000550418 KLRC1P26715 233 aa16.82■□□□□ 0.28
RBFOX1-212ENST00000550418 CNGA1P29973 690 aa16.82■□□□□ 0.28
RBFOX1-212ENST00000550418 GALCP54803 685 aa16.82■□□□□ 0.28
RBFOX1-212ENST00000550418 GIMAP8Q8ND71 665 aaPredicted RBP16.82■□□□□ 0.28
RBFOX1-212ENST00000550418 IGDCC4Q8TDY8 1250 aa16.82■□□□□ 0.28
RBFOX1-212ENST00000550418 ERP44Q9BS26 406 aa16.82■□□□□ 0.28
RBFOX1-212ENST00000550418 WARS2Q9UGM6 360 aaKnown RBP16.82■□□□□ 0.28
RBFOX1-212ENST00000550418 PLEKHG2Q9H7P9 1386 aa16.82■□□□□ 0.28
RBFOX1-212ENST00000550418 NQO1P15559 274 aaKnown RBP16.82■□□□□ 0.28
RBFOX1-212ENST00000550418 JAMLQ86YT9 394 aa16.82■□□□□ 0.28
RBFOX1-212ENST00000550418 KIRREL3Q8IZU9 778 aa16.82■□□□□ 0.28
RBFOX1-212ENST00000550418 CPVLQ9H3G5 476 aa16.82■□□□□ 0.28
RBFOX1-212ENST00000550418 NUB1Q9Y5A7 615 aa16.82■□□□□ 0.28
RBFOX1-212ENST00000550418 AGLP35573 1532 aa16.82■□□□□ 0.28
RBFOX1-212ENST00000550418 POTEB3A0JP26 581 aa16.82■□□□□ 0.28
RBFOX1-212ENST00000550418 POTECB2RU33 542 aa16.82■□□□□ 0.28
RBFOX1-212ENST00000550418 NMT2O60551 498 aa16.82■□□□□ 0.28
RBFOX1-212ENST00000550418 PRLRP16471 622 aa16.82■□□□□ 0.28
RBFOX1-212ENST00000550418 POTEBQ6S5H4 581 aa16.82■□□□□ 0.28
RBFOX1-212ENST00000550418 FRMD5Q7Z6J6 570 aa16.82■□□□□ 0.28
RBFOX1-212ENST00000550418 CASKIN2Q8WXE0 1202 aa16.82■□□□□ 0.28
RBFOX1-212ENST00000550418 TMEM47Q9BQJ4 181 aa16.82■□□□□ 0.28
RBFOX1-212ENST00000550418 TRPV6Q9H1D0 765 aa16.82■□□□□ 0.28
RBFOX1-212ENST00000550418 BARHL2Q9NY43 387 aa16.82■□□□□ 0.28
RBFOX1-212ENST00000550418 FRMPD1Q5SYB0 1578 aa16.82■□□□□ 0.28
RBFOX1-212ENST00000550418 ESYT2A0FGR8 921 aa16.82■□□□□ 0.28
RBFOX1-212ENST00000550418 PRPSAP2O60256 369 aa16.82■□□□□ 0.28
RBFOX1-212ENST00000550418 KDSRQ06136 332 aa16.82■□□□□ 0.28
RBFOX1-212ENST00000550418 TMEM259Q4ZIN3 620 aa16.82■□□□□ 0.28
RBFOX1-212ENST00000550418 ATP6V0A1Q93050 837 aa16.82■□□□□ 0.28
RBFOX1-212ENST00000550418 HIC2Q96JB3 615 aa16.82■□□□□ 0.28
RBFOX1-212ENST00000550418 PHF20Q9BVI0 1012 aa16.82■□□□□ 0.28
RBFOX1-212ENST00000550418 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.82■□□□□ 0.28
RBFOX1-212ENST00000550418 CASP2P42575 452 aa16.81■□□□□ 0.28
RBFOX1-212ENST00000550418 SCNN1DP51172 638 aa16.81■□□□□ 0.28
RBFOX1-212ENST00000550418 SLC29A2Q14542 456 aa16.81■□□□□ 0.28
RBFOX1-212ENST00000550418 NBPF20Q3BBV1 942 aa16.81■□□□□ 0.28
RBFOX1-212ENST00000550418 ATL2Q8NHH9 583 aa16.81■□□□□ 0.28
RBFOX1-212ENST00000550418 PIGOQ8TEQ8 1089 aa16.81■□□□□ 0.28
RBFOX1-212ENST00000550418 ERGIC2Q96RQ1 377 aa16.81■□□□□ 0.28
RBFOX1-212ENST00000550418 KLC2Q9H0B6 622 aa16.81■□□□□ 0.28
RBFOX1-212ENST00000550418 INTS2Q9H0H0 1204 aaKnown RBP16.81■□□□□ 0.28
RBFOX1-212ENST00000550418 ZWILCHQ9H900 591 aa16.81■□□□□ 0.28
RBFOX1-212ENST00000550418 NPHS2Q9NP85 383 aa16.81■□□□□ 0.28
RBFOX1-212ENST00000550418 PLAGL2Q9UPG8 496 aa16.81■□□□□ 0.28
RBFOX1-212ENST00000550418 PPIP5K2O43314 1243 aa16.81■□□□□ 0.28
RBFOX1-212ENST00000550418 GRIN1Q05586 938 aa16.81■□□□□ 0.28
RBFOX1-212ENST00000550418 SCARF1Q14162 830 aa16.81■□□□□ 0.28
RBFOX1-212ENST00000550418 ABCB5Q2M3G0 1257 aa16.81■□□□□ 0.28
RBFOX1-212ENST00000550418 SUSD4Q5VX71 490 aa16.81■□□□□ 0.28
RBFOX1-212ENST00000550418 XXYLT1Q8NBI6 393 aa16.81■□□□□ 0.28
RBFOX1-212ENST00000550418 CNKSR1Q969H4 720 aa16.81■□□□□ 0.28
RBFOX1-212ENST00000550418 CELF4Q9BZC1 486 aaKnown RBP16.81■□□□□ 0.28
RBFOX1-212ENST00000550418 ATP6V0A4Q9HBG4 840 aa16.81■□□□□ 0.28
RBFOX1-212ENST00000550418 PICK1Q9NRD5 415 aa16.81■□□□□ 0.28
RBFOX1-212ENST00000550418 SRP68Q9UHB9 627 aaKnown RBP16.81■□□□□ 0.28
RBFOX1-212ENST00000550418 C1orf167Q5SNV9 1468 aa16.81■□□□□ 0.28
RBFOX1-212ENST00000550418 ITIH2P19823 946 aa16.81■□□□□ 0.28
RBFOX1-212ENST00000550418 CDK8P49336 464 aa16.81■□□□□ 0.28
RBFOX1-212ENST00000550418 USP11P51784 963 aa16.81■□□□□ 0.28
RBFOX1-212ENST00000550418 ANTXR2P58335 489 aa16.81■□□□□ 0.28
RBFOX1-212ENST00000550418 ERFEQ4G0M1 354 aa16.81■□□□□ 0.28
RBFOX1-212ENST00000550418 DACT3Q96B18 629 aaPredicted RBP16.81■□□□□ 0.28
RBFOX1-212ENST00000550418 ALG13Q9NP73 1137 aaKnown RBP16.81■□□□□ 0.28
RBFOX1-212ENST00000550418 CCDC195A0A1B0GUA6 201 aa16.81■□□□□ 0.28
RBFOX1-212ENST00000550418 PYGBP11216 843 aa16.81■□□□□ 0.28
RBFOX1-212ENST00000550418 SERPINB3P29508 390 aa16.81■□□□□ 0.28
RBFOX1-212ENST00000550418 VHLP40337 213 aa16.81■□□□□ 0.28
RBFOX1-212ENST00000550418 PRPSAP1Q14558 356 aa16.81■□□□□ 0.28
RBFOX1-212ENST00000550418 ITIH4Q14624 930 aa16.81■□□□□ 0.28
RBFOX1-212ENST00000550418 ERICH1Q86X53 443 aa16.81■□□□□ 0.28
RBFOX1-212ENST00000550418 DNAJC7Q99615 494 aa16.81■□□□□ 0.28
RBFOX1-212ENST00000550418 EIF2AQ9BY44 585 aaKnown RBP16.81■□□□□ 0.28
RBFOX1-212ENST00000550418 RANBP17Q9H2T7 1088 aaKnown RBP16.81■□□□□ 0.28
RBFOX1-212ENST00000550418 UBN1Q9NPG3 1134 aa16.81■□□□□ 0.28
RBFOX1-212ENST00000550418 HPSEQ9Y251 543 aa16.81■□□□□ 0.28
RBFOX1-212ENST00000550418 DLC1Q96QB1 1528 aa16.8■□□□□ 0.28
RBFOX1-212ENST00000550418 WDR46O15213 610 aaKnown RBP16.8■□□□□ 0.28
RBFOX1-212ENST00000550418 CYP2D6P10635 497 aa16.8■□□□□ 0.28
RBFOX1-212ENST00000550418 RFX1P22670 979 aa16.8■□□□□ 0.28
RBFOX1-212ENST00000550418 TEDDM1Q5T9Z0 273 aa16.8■□□□□ 0.28
RBFOX1-212ENST00000550418 RAB44Q7Z6P3 723 aaPredicted RBP16.8■□□□□ 0.28
RBFOX1-212ENST00000550418 SLC35G2Q8TBE7 412 aa16.8■□□□□ 0.28
RBFOX1-212ENST00000550418 C7orf25Q9BPX7 421 aa16.8■□□□□ 0.28
RBFOX1-212ENST00000550418 C11orf70Q9BRQ4 267 aa16.8■□□□□ 0.28
RBFOX1-212ENST00000550418 CD58P19256 250 aa16.8■□□□□ 0.28
RBFOX1-212ENST00000550418 PSMA2P25787 234 aa16.8■□□□□ 0.28
RBFOX1-212ENST00000550418 KLK7P49862 253 aa16.8■□□□□ 0.28
RBFOX1-212ENST00000550418 PTPAQ15257 358 aa16.8■□□□□ 0.28
RBFOX1-212ENST00000550418 LRRC36Q1X8D7 754 aa16.8■□□□□ 0.28
RBFOX1-212ENST00000550418 PRPF31Q8WWY3 499 aaKnown RBP16.8■□□□□ 0.28
RBFOX1-212ENST00000550418 C9orf72Q96LT7 481 aa16.8■□□□□ 0.28
RBFOX1-212ENST00000550418 TMBIM4Q9HC24 238 aa16.8■□□□□ 0.28
RBFOX1-212ENST00000550418 KRT82Q9NSB4 513 aa16.8■□□□□ 0.28
RBFOX1-212ENST00000550418 MROH2AA6NES4 1674 aa16.8■□□□□ 0.28
RBFOX1-212ENST00000550418 SYNJ2BP-COX16A0A087WUM0 186 aa16.8■□□□□ 0.28
RBFOX1-212ENST00000550418 RNF103-CHMP3A0A140T963 221 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms