RNA–Protein interactions for RNA: ENST00000550335.5

HCFC2-204, Transcript of host cell factor C2, humanhuman

TSL 5

Gene HCFC2, Length 1,223 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-204ENST00000550335 TCEA3O75764 348 aa7.09□□□□□ -1.27
HCFC2-204ENST00000550335 HRGP04196 525 aa7.09□□□□□ -1.27
HCFC2-204ENST00000550335 SETSIPP0DME0 302 aa7.09□□□□□ -1.27
HCFC2-204ENST00000550335 ZKSCAN1P17029 563 aaPredicted RBP7.09□□□□□ -1.27
HCFC2-204ENST00000550335 SYN1P17600 705 aa7.09□□□□□ -1.27
HCFC2-204ENST00000550335 PAX3P23760 479 aa7.09□□□□□ -1.27
HCFC2-204ENST00000550335 MC3RP41968 323 aa7.09□□□□□ -1.27
HCFC2-204ENST00000550335 NCKAP1LP55160 1127 aa7.09□□□□□ -1.27
HCFC2-204ENST00000550335 PER3P56645 1201 aa7.09□□□□□ -1.27
HCFC2-204ENST00000550335 C4orf46Q504U0 113 aa7.09□□□□□ -1.27
HCFC2-204ENST00000550335 FAM83BQ5T0W9 1011 aa7.09□□□□□ -1.27
HCFC2-204ENST00000550335 APBB1IPQ7Z5R6 666 aaPredicted RBP7.09□□□□□ -1.27
HCFC2-204ENST00000550335 TTC7BQ86TV6 843 aa7.09□□□□□ -1.27
HCFC2-204ENST00000550335 LRTOMTQ8WZ04 291 aa7.09□□□□□ -1.27
HCFC2-204ENST00000550335 EVI5LQ96CN4 794 aa7.09□□□□□ -1.27
HCFC2-204ENST00000550335 NT5C1BQ96P26 610 aa7.09□□□□□ -1.27
HCFC2-204ENST00000550335 PITHD1Q9GZP4 211 aaPredicted RBP7.09□□□□□ -1.27
HCFC2-204ENST00000550335 NUP62CLQ9H1M0 184 aa7.09□□□□□ -1.27
HCFC2-204ENST00000550335 RBM12Q9NTZ6 932 aaKnown RBP7.09□□□□□ -1.27
HCFC2-204ENST00000550335 CFAP20Q9Y6A4 193 aaKnown RBP7.09□□□□□ -1.27
HCFC2-204ENST00000550335 RHPN2P1A8MT19 583 aa7.08□□□□□ -1.28
HCFC2-204ENST00000550335 ABLIM1O14639 778 aa7.08□□□□□ -1.28
HCFC2-204ENST00000550335 ADAMTS4O75173 837 aa7.08□□□□□ -1.28
HCFC2-204ENST00000550335 IL18BPO95998 194 aa7.08□□□□□ -1.28
HCFC2-204ENST00000550335 C8BP07358 591 aa7.08□□□□□ -1.28
HCFC2-204ENST00000550335 NCAM1P13591 858 aa7.08□□□□□ -1.28
HCFC2-204ENST00000550335 ALDH5A1P51649 535 aaPredicted RBP7.08□□□□□ -1.28
HCFC2-204ENST00000550335 CD69Q07108 199 aa7.08□□□□□ -1.28
HCFC2-204ENST00000550335 PPP3CAQ08209 521 aa7.08□□□□□ -1.28
HCFC2-204ENST00000550335 MAP3K12Q12852 859 aa7.08□□□□□ -1.28
HCFC2-204ENST00000550335 THEMIS2Q5TEJ8 643 aa7.08□□□□□ -1.28
HCFC2-204ENST00000550335 ZNF605Q86T29 641 aa7.08□□□□□ -1.28
HCFC2-204ENST00000550335 RSPH3Q86UC2 560 aa7.08□□□□□ -1.28
HCFC2-204ENST00000550335 GPR156Q8NFN8 814 aa7.08□□□□□ -1.28
HCFC2-204ENST00000550335 OR5AN1Q8NGI8 311 aa7.08□□□□□ -1.28
HCFC2-204ENST00000550335 CDK5RAP3Q96JB5 506 aa7.08□□□□□ -1.28
HCFC2-204ENST00000550335 CLPTM1LQ96KA5 538 aa7.08□□□□□ -1.28
HCFC2-204ENST00000550335 FDXACB1Q9BRP7 624 aaPredicted RBP7.08□□□□□ -1.28
HCFC2-204ENST00000550335 HSPBP1Q9NZL4 362 aa7.08□□□□□ -1.28
HCFC2-204ENST00000550335 SAE1Q9UBE0 346 aaPredicted RBP7.08□□□□□ -1.28
HCFC2-204ENST00000550335 CDC42EP3Q9UKI2 254 aa7.08□□□□□ -1.28
HCFC2-204ENST00000550335 CORO2BQ9UQ03 480 aa7.08□□□□□ -1.28
HCFC2-204ENST00000550335 PCDHB1Q9Y5F3 818 aa7.08□□□□□ -1.28
HCFC2-204ENST00000550335 PCDHA3Q9Y5H8 950 aa7.08□□□□□ -1.28
HCFC2-204ENST00000550335 CYP2C8P10632 490 aa7.07□□□□□ -1.28
HCFC2-204ENST00000550335 VIPR1P32241 457 aa7.07□□□□□ -1.28
HCFC2-204ENST00000550335 PPM1FP49593 454 aaPredicted RBP7.07□□□□□ -1.28
HCFC2-204ENST00000550335 DSC2Q02487 901 aa7.07□□□□□ -1.28
HCFC2-204ENST00000550335 CACNB2Q08289 660 aaPredicted RBP7.07□□□□□ -1.28
HCFC2-204ENST00000550335 CCDC178Q5BJE1 867 aa7.07□□□□□ -1.28
HCFC2-204ENST00000550335 OLFML2BQ68BL8 750 aa7.07□□□□□ -1.28
HCFC2-204ENST00000550335 GRAMD4Q6IC98 578 aa7.07□□□□□ -1.28
HCFC2-204ENST00000550335 MAEAQ7L5Y9 396 aa7.07□□□□□ -1.28
HCFC2-204ENST00000550335 BMP8AQ7Z5Y6 402 aa7.07□□□□□ -1.28
HCFC2-204ENST00000550335 ANKRD42Q8N9B4 389 aa7.07□□□□□ -1.28
HCFC2-204ENST00000550335 DTX3Q8N9I9 347 aa7.07□□□□□ -1.28
HCFC2-204ENST00000550335 CCHCR1Q8TD31 782 aa7.07□□□□□ -1.28
HCFC2-204ENST00000550335 PGBD4Q96DM1 585 aa7.07□□□□□ -1.28
HCFC2-204ENST00000550335 TMEM209Q96SK2 561 aa7.07□□□□□ -1.28
HCFC2-204ENST00000550335 UHRF1Q96T88 793 aaPredicted RBP7.07□□□□□ -1.28
HCFC2-204ENST00000550335 TDP1Q9NUW8 608 aa7.07□□□□□ -1.28
HCFC2-204ENST00000550335 POLR3BQ9NW08 1133 aaPredicted RBP7.07□□□□□ -1.28
HCFC2-204ENST00000550335 CPA4Q9UI42 421 aa7.07□□□□□ -1.28
HCFC2-204ENST00000550335 A0A0A6YYK5 440 aaPredicted RBP7.06□□□□□ -1.28
HCFC2-204ENST00000550335 FAM171A2A8MVW0 826 aa7.06□□□□□ -1.28
HCFC2-204ENST00000550335 KIAA1324LA8MWY0 1029 aaPredicted RBP7.06□□□□□ -1.28
HCFC2-204ENST00000550335 KPNA5O15131 536 aa7.06□□□□□ -1.28
HCFC2-204ENST00000550335 SH3BP5O60239 455 aa7.06□□□□□ -1.28
HCFC2-204ENST00000550335 NBNO60934 754 aa7.06□□□□□ -1.28
HCFC2-204ENST00000550335 HNRNPLP14866 589 aaKnown RBP eCLIP7.06□□□□□ -1.28
HCFC2-204ENST00000550335 PIK3CBP42338 1070 aa7.06□□□□□ -1.28
HCFC2-204ENST00000550335 WASP42768 502 aa7.06□□□□□ -1.28
HCFC2-204ENST00000550335 AGFG1P52594 562 aaKnown RBP7.06□□□□□ -1.28
HCFC2-204ENST00000550335 SRSF3P84103 164 aaKnown RBP7.06□□□□□ -1.28
HCFC2-204ENST00000550335 TRIM14Q14142 442 aa7.06□□□□□ -1.28
HCFC2-204ENST00000550335 SEPT2Q15019 361 aa7.06□□□□□ -1.28
HCFC2-204ENST00000550335 INO80DQ53TQ3 878 aaPredicted RBP7.06□□□□□ -1.28
HCFC2-204ENST00000550335 KANK2Q63ZY3 851 aa7.06□□□□□ -1.28
HCFC2-204ENST00000550335 SWSAP1Q6NVH7 229 aa7.06□□□□□ -1.28
HCFC2-204ENST00000550335 MYLK4Q86YV6 388 aaPredicted RBP7.06□□□□□ -1.28
HCFC2-204ENST00000550335 C3orf20Q8ND61 904 aa7.06□□□□□ -1.28
HCFC2-204ENST00000550335 SMARCC2Q8TAQ2 1214 aa7.06□□□□□ -1.28
HCFC2-204ENST00000550335 POF1BQ8WVV4 589 aa7.06□□□□□ -1.28
HCFC2-204ENST00000550335 RIPOR3Q96MK2 946 aa7.06□□□□□ -1.28
HCFC2-204ENST00000550335 CLIC6Q96NY7 704 aa7.06□□□□□ -1.28
HCFC2-204ENST00000550335 VRK1Q99986 396 aaPredicted RBP7.06□□□□□ -1.28
HCFC2-204ENST00000550335 SOX7Q9BT81 388 aa7.06□□□□□ -1.28
HCFC2-204ENST00000550335 SIRT5Q9NXA8 310 aa7.06□□□□□ -1.28
HCFC2-204ENST00000550335 SCOCQ9UIL1 159 aa7.06□□□□□ -1.28
HCFC2-204ENST00000550335 TPCN1Q9ULQ1 816 aa7.06□□□□□ -1.28
HCFC2-204ENST00000550335 RPTORQ8N122 1335 aa7.05□□□□□ -1.28
HCFC2-204ENST00000550335 HALP42357 657 aa7.05□□□□□ -1.28
HCFC2-204ENST00000550335 PRIM2P49643 509 aa7.05□□□□□ -1.28
HCFC2-204ENST00000550335 MGAT2Q10469 447 aa7.05□□□□□ -1.28
HCFC2-204ENST00000550335 FGL2Q14314 439 aa7.05□□□□□ -1.28
HCFC2-204ENST00000550335 KHDC1Q4VXA5 237 aaKnown RBP7.05□□□□□ -1.28
HCFC2-204ENST00000550335 TMEM132EQ6IEE7 984 aa7.05□□□□□ -1.28
HCFC2-204ENST00000550335 ERAP2Q6P179 960 aa7.05□□□□□ -1.28
HCFC2-204ENST00000550335 ABHD15Q6UXT9 468 aa7.05□□□□□ -1.28
HCFC2-204ENST00000550335 MYRIPQ8NFW9 859 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms