RNA–Protein interactions for RNA: ENST00000550070.6

ERBB3-214, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,729 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-214ENST00000550070 CHMP6Q96FZ7 201 aa11.11□□□□□ -0.63
ERBB3-214ENST00000550070 CCDC17Q96LX7 622 aa11.11□□□□□ -0.63
ERBB3-214ENST00000550070 CNOT10Q9H9A5 744 aaKnown RBP11.11□□□□□ -0.63
ERBB3-214ENST00000550070 SEPT11Q9NVA2 429 aaKnown RBP11.11□□□□□ -0.63
ERBB3-214ENST00000550070 SMCHD1A6NHR9 2005 aa11.11□□□□□ -0.63
ERBB3-214ENST00000550070 THSD7AQ9UPZ6 1657 aa11.11□□□□□ -0.63
ERBB3-214ENST00000550070 FRMPD4Q14CM0 1322 aa11.11□□□□□ -0.63
ERBB3-214ENST00000550070 LTBP1Q14766 1721 aa11.11□□□□□ -0.63
ERBB3-214ENST00000550070 QSER1Q2KHR3 1735 aa11.11□□□□□ -0.63
ERBB3-214ENST00000550070 OPLAHO14841 1288 aa11.11□□□□□ -0.63
ERBB3-214ENST00000550070 CTNND1O60716 968 aaKnown RBP11.11□□□□□ -0.63
ERBB3-214ENST00000550070 NUDT17P0C025 328 aa11.11□□□□□ -0.63
ERBB3-214ENST00000550070 CHN1P15882 459 aa11.11□□□□□ -0.63
ERBB3-214ENST00000550070 GAP43P17677 238 aa11.11□□□□□ -0.63
ERBB3-214ENST00000550070 MAP2K2P36507 400 aa11.11□□□□□ -0.63
ERBB3-214ENST00000550070 CACNB3P54284 484 aa11.11□□□□□ -0.63
ERBB3-214ENST00000550070 PHLDB3Q6NSJ2 640 aa11.11□□□□□ -0.63
ERBB3-214ENST00000550070 CYB5D1Q6P9G0 228 aa11.11□□□□□ -0.63
ERBB3-214ENST00000550070 C1orf186Q6ZWK4 172 aa11.11□□□□□ -0.63
ERBB3-214ENST00000550070 FAM228AQ86W67 206 aa11.11□□□□□ -0.63
ERBB3-214ENST00000550070 FBXO11Q86XK2 927 aa11.11□□□□□ -0.63
ERBB3-214ENST00000550070 CENPTQ96BT3 561 aa11.11□□□□□ -0.63
ERBB3-214ENST00000550070 C18orf8Q96DM3 657 aa11.11□□□□□ -0.63
ERBB3-214ENST00000550070 FIZ1Q96SL8 496 aa11.11□□□□□ -0.63
ERBB3-214ENST00000550070 HSD17B14Q9BPX1 270 aa11.11□□□□□ -0.63
ERBB3-214ENST00000550070 FAM129AQ9BZQ8 928 aa11.11□□□□□ -0.63
ERBB3-214ENST00000550070 COA1Q9GZY4 146 aa11.11□□□□□ -0.63
ERBB3-214ENST00000550070 INTS2Q9H0H0 1204 aaKnown RBP11.11□□□□□ -0.63
ERBB3-214ENST00000550070 ADAM7Q9H2U9 754 aa11.11□□□□□ -0.63
ERBB3-214ENST00000550070 PABPC3Q9H361 631 aaKnown RBP11.11□□□□□ -0.63
ERBB3-214ENST00000550070 NYAP2Q9P242 653 aa11.11□□□□□ -0.63
ERBB3-214ENST00000550070 SIPA1L1O43166 1804 aa11.1□□□□□ -0.63
ERBB3-214ENST00000550070 TLDC2A0PJX2 215 aa11.1□□□□□ -0.63
ERBB3-214ENST00000550070 FAM187AA6NFU0 413 aa11.1□□□□□ -0.63
ERBB3-214ENST00000550070 PPP1R12BO60237 982 aaPredicted RBP11.1□□□□□ -0.63
ERBB3-214ENST00000550070 PTGIRP43119 386 aa11.1□□□□□ -0.63
ERBB3-214ENST00000550070 CYP2J2P51589 502 aa11.1□□□□□ -0.63
ERBB3-214ENST00000550070 SLC29A2Q14542 456 aa11.1□□□□□ -0.63
ERBB3-214ENST00000550070 NFIL3Q16649 462 aa11.1□□□□□ -0.63
ERBB3-214ENST00000550070 TPH2Q8IWU9 490 aa11.1□□□□□ -0.63
ERBB3-214ENST00000550070 ZDHHC14Q8IZN3 488 aa11.1□□□□□ -0.63
ERBB3-214ENST00000550070 OGFOD1Q8N543 542 aa11.1□□□□□ -0.63
ERBB3-214ENST00000550070 DYDC2Q96IM9 177 aa11.1□□□□□ -0.63
ERBB3-214ENST00000550070 ZNF317Q96PQ6 595 aaPredicted RBP11.1□□□□□ -0.63
ERBB3-214ENST00000550070 GRHL1Q9NZI5 618 aa11.1□□□□□ -0.63
ERBB3-214ENST00000550070 APEX2Q9UBZ4 518 aa11.1□□□□□ -0.63
ERBB3-214ENST00000550070 PPP1R1BQ9UD71 204 aaPredicted RBP11.1□□□□□ -0.63
ERBB3-214ENST00000550070 ALG6Q9Y672 507 aa11.1□□□□□ -0.63
ERBB3-214ENST00000550070 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.1□□□□□ -0.63
ERBB3-214ENST00000550070 GOLGA6L10A0A0M3HER8 536 aa11.1□□□□□ -0.63
ERBB3-214ENST00000550070 FOXN3O00409 490 aaPredicted RBP11.1□□□□□ -0.63
ERBB3-214ENST00000550070 SLITRK3O94933 977 aa11.1□□□□□ -0.63
ERBB3-214ENST00000550070 PARNO95453 639 aaKnown RBP11.1□□□□□ -0.63
ERBB3-214ENST00000550070 FOSP01100 380 aaPredicted RBP11.1□□□□□ -0.63
ERBB3-214ENST00000550070 GYS1P13807 737 aa11.1□□□□□ -0.63
ERBB3-214ENST00000550070 HOXA10P31260 410 aaPredicted RBP11.1□□□□□ -0.63
ERBB3-214ENST00000550070 MMP13P45452 471 aa11.1□□□□□ -0.63
ERBB3-214ENST00000550070 CDR1P51861 262 aa11.1□□□□□ -0.63
ERBB3-214ENST00000550070 IFI35P80217 286 aaPredicted RBP11.1□□□□□ -0.63
ERBB3-214ENST00000550070 TCP10Q12799 353 aa11.1□□□□□ -0.63
ERBB3-214ENST00000550070 MAPK7Q13164 816 aa11.1□□□□□ -0.63
ERBB3-214ENST00000550070 DHX34Q14147 1143 aaKnown RBP11.1□□□□□ -0.63
ERBB3-214ENST00000550070 SLC15A2Q16348 729 aa11.1□□□□□ -0.63
ERBB3-214ENST00000550070 DOK7Q18PE1 504 aa11.1□□□□□ -0.63
ERBB3-214ENST00000550070 CERKLQ49MI3 558 aaPredicted RBP11.1□□□□□ -0.63
ERBB3-214ENST00000550070 HOOK3Q86VS8 718 aa11.1□□□□□ -0.63
ERBB3-214ENST00000550070 PARP9Q8IXQ6 854 aa11.1□□□□□ -0.63
ERBB3-214ENST00000550070 NEK9Q8TD19 979 aa11.1□□□□□ -0.63
ERBB3-214ENST00000550070 HVCN1Q96D96 273 aa11.1□□□□□ -0.63
ERBB3-214ENST00000550070 NAP1L3Q99457 506 aaPredicted RBP11.1□□□□□ -0.63
ERBB3-214ENST00000550070 MKNK1Q9BUB5 465 aa11.1□□□□□ -0.63
ERBB3-214ENST00000550070 PCDHAC2Q9Y5I4 1007 aa11.1□□□□□ -0.63
ERBB3-214ENST00000550070 LY75O60449 1722 aa11.09□□□□□ -0.63
ERBB3-214ENST00000550070 RPTORQ8N122 1335 aa11.09□□□□□ -0.63
ERBB3-214ENST00000550070 IGLV3-22A0A075B6J6 115 aa11.09□□□□□ -0.63
ERBB3-214ENST00000550070 DDTLA6NHG4 134 aaPredicted RBP11.09□□□□□ -0.63
ERBB3-214ENST00000550070 SMIM23A6NLE4 172 aa11.09□□□□□ -0.63
ERBB3-214ENST00000550070 F5H6K3 240 aa11.09□□□□□ -0.63
ERBB3-214ENST00000550070 LRRN2O75325 713 aa11.09□□□□□ -0.63
ERBB3-214ENST00000550070 KRT13P13646 458 aa11.09□□□□□ -0.63
ERBB3-214ENST00000550070 ZNF76P36508 570 aa11.09□□□□□ -0.63
ERBB3-214ENST00000550070 MARCKSL1P49006 195 aa11.09□□□□□ -0.63
ERBB3-214ENST00000550070 DRG2P55039 364 aaKnown RBP11.09□□□□□ -0.63
ERBB3-214ENST00000550070 SF3A3Q12874 501 aaKnown RBP eCLIP11.09□□□□□ -0.631e-6■■□□□ 11.4
ERBB3-214ENST00000550070 PPP2R5EQ16537 467 aa11.09□□□□□ -0.63
ERBB3-214ENST00000550070 ZNF720Q7Z2F6 126 aa11.09□□□□□ -0.63
ERBB3-214ENST00000550070 RDH13Q8NBN7 331 aa11.09□□□□□ -0.63
ERBB3-214ENST00000550070 SLC20A1Q8WUM9 679 aa11.09□□□□□ -0.63
ERBB3-214ENST00000550070 ATXN2LQ8WWM7 1075 aaKnown RBP11.09□□□□□ -0.63
ERBB3-214ENST00000550070 KRT35Q92764 455 aa11.09□□□□□ -0.63
ERBB3-214ENST00000550070 PGM2Q96G03 612 aa11.09□□□□□ -0.63
ERBB3-214ENST00000550070 SELENOSQ9BQE4 189 aa11.09□□□□□ -0.63
ERBB3-214ENST00000550070 SEMA4AQ9H3S1 761 aa11.09□□□□□ -0.63
ERBB3-214ENST00000550070 AZI2Q9H6S1 392 aa11.09□□□□□ -0.63
ERBB3-214ENST00000550070 AGPAT3Q9NRZ7 376 aa11.09□□□□□ -0.63
ERBB3-214ENST00000550070 DMAC2Q9NW81 257 aa11.09□□□□□ -0.63
ERBB3-214ENST00000550070 BCS1LQ9Y276 419 aa11.09□□□□□ -0.63
ERBB3-214ENST00000550070 COMMD10Q9Y6G5 202 aa11.09□□□□□ -0.63
ERBB3-214ENST00000550070 CHMP2AO43633 222 aa11.09□□□□□ -0.63
ERBB3-214ENST00000550070 MMEP08473 750 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms