RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 CEP170P1Q96L14 293 aa17.25■□□□□ 0.35
RAB5C-205ENST00000550013 SLKQ9H2G2 1235 aaPredicted RBP17.25■□□□□ 0.35
RAB5C-205ENST00000550013 KCNMB3Q9NPA1 279 aa17.25■□□□□ 0.35
RAB5C-205ENST00000550013 VPS13AQ96RL7 3174 aa17.24■□□□□ 0.35
RAB5C-205ENST00000550013 MYO15AQ9UKN7 3530 aa17.24■□□□□ 0.35
RAB5C-205ENST00000550013 CARNS1A5YM72 827 aa17.24■□□□□ 0.35
RAB5C-205ENST00000550013 GALR2O43603 387 aaPredicted RBP17.24■□□□□ 0.35
RAB5C-205ENST00000550013 MRPL10Q7Z7H8 261 aaKnown RBP17.24■□□□□ 0.35
RAB5C-205ENST00000550013 SLC7A3Q8WY07 619 aa17.24■□□□□ 0.35
RAB5C-205ENST00000550013 KLHL5Q96PQ7 755 aa17.24■□□□□ 0.35
RAB5C-205ENST00000550013 DHX33Q9H6R0 707 aaKnown RBP17.24■□□□□ 0.35
RAB5C-205ENST00000550013 RSAD1Q9HA92 442 aa17.24■□□□□ 0.35
RAB5C-205ENST00000550013 PTPRZ1P23471 2315 aaPredicted RBP17.23■□□□□ 0.35
RAB5C-205ENST00000550013 CCDC194A0A1B0GVG4 234 aa17.23■□□□□ 0.35
RAB5C-205ENST00000550013 POMCP01189 267 aa17.23■□□□□ 0.35
RAB5C-205ENST00000550013 P4HBP07237 508 aaKnown RBP17.23■□□□□ 0.35
RAB5C-205ENST00000550013 CNPP09543 421 aaKnown RBP17.23■□□□□ 0.35
RAB5C-205ENST00000550013 HOXA11P31270 313 aaPredicted RBP17.23■□□□□ 0.35
RAB5C-205ENST00000550013 LAMTOR4Q0VGL1 99 aa17.23■□□□□ 0.35
RAB5C-205ENST00000550013 SRGAP1Q7Z6B7 1085 aa17.23■□□□□ 0.35
RAB5C-205ENST00000550013 GPR149Q86SP6 731 aa17.23■□□□□ 0.35
RAB5C-205ENST00000550013 PPFIBP1Q86W92 1011 aa17.23■□□□□ 0.35
RAB5C-205ENST00000550013 FAM177A1Q8N128 213 aaPredicted RBP17.23■□□□□ 0.35
RAB5C-205ENST00000550013 PLCD3Q8N3E9 789 aa17.23■□□□□ 0.35
RAB5C-205ENST00000550013 PSPC1Q8WXF1 523 aaKnown RBP17.23■□□□□ 0.35
RAB5C-205ENST00000550013 FAM20AQ96MK3 541 aa17.23■□□□□ 0.35
RAB5C-205ENST00000550013 PHF20Q9BVI0 1012 aa17.23■□□□□ 0.35
RAB5C-205ENST00000550013 IRF2BPLQ9H1B7 796 aa17.23■□□□□ 0.35
RAB5C-205ENST00000550013 SFXN1Q9H9B4 322 aa17.23■□□□□ 0.35
RAB5C-205ENST00000550013 GJB4Q9NTQ9 266 aa17.23■□□□□ 0.35
RAB5C-205ENST00000550013 USTQ9Y2C2 406 aa17.23■□□□□ 0.35
RAB5C-205ENST00000550013 RIF1Q5UIP0 2472 aaKnown RBP17.22■□□□□ 0.35
RAB5C-205ENST00000550013 SPDYE4A6NLX3 237 aa17.22■□□□□ 0.35
RAB5C-205ENST00000550013 ZBTB39O15060 712 aa17.22■□□□□ 0.35
RAB5C-205ENST00000550013 LILRB3O75022 631 aa17.22■□□□□ 0.35
RAB5C-205ENST00000550013 KLRC2P26717 231 aa17.22■□□□□ 0.35
RAB5C-205ENST00000550013 RFC5P40937 340 aa17.22■□□□□ 0.35
RAB5C-205ENST00000550013 CLCN4P51793 760 aa17.22■□□□□ 0.35
RAB5C-205ENST00000550013 NUBP1P53384 320 aa17.22■□□□□ 0.35
RAB5C-205ENST00000550013 CPLX2Q6PUV4 134 aaKnown RBP17.22■□□□□ 0.35
RAB5C-205ENST00000550013 NEK8Q86SG6 692 aa17.22■□□□□ 0.35
RAB5C-205ENST00000550013 OXER1Q8TDS5 423 aa17.22■□□□□ 0.35
RAB5C-205ENST00000550013 HAS1Q92839 578 aa17.22■□□□□ 0.35
RAB5C-205ENST00000550013 FAM193BQ96PV7 902 aaPredicted RBP17.22■□□□□ 0.35
RAB5C-205ENST00000550013 LXNQ9BS40 222 aa17.22■□□□□ 0.35
RAB5C-205ENST00000550013 EMILIN2Q9BXX0 1053 aa17.22■□□□□ 0.35
RAB5C-205ENST00000550013 RGL1Q9NZL6 768 aa17.22■□□□□ 0.35
RAB5C-205ENST00000550013 FAN1Q9Y2M0 1017 aa17.22■□□□□ 0.35
RAB5C-205ENST00000550013 SPTBN4Q9H254 2564 aa17.22■□□□□ 0.35
RAB5C-205ENST00000550013 CNTNAP2Q9UHC6 1331 aa17.21■□□□□ 0.35
RAB5C-205ENST00000550013 C2CD2LO14523 706 aa17.21■□□□□ 0.35
RAB5C-205ENST00000550013 NRP1O14786 923 aa17.21■□□□□ 0.35
RAB5C-205ENST00000550013 CCNT1O60563 726 aaKnown RBP17.21■□□□□ 0.35
RAB5C-205ENST00000550013 DKC1O60832 514 aaKnown RBP eCLIP17.21■□□□□ 0.35
RAB5C-205ENST00000550013 ALDH2P05091 517 aa17.21■□□□□ 0.35
RAB5C-205ENST00000550013 YWHABP31946 246 aaKnown RBP17.21■□□□□ 0.35
RAB5C-205ENST00000550013 EMC2Q15006 297 aa17.21■□□□□ 0.35
RAB5C-205ENST00000550013 EPHA7Q15375 998 aa17.21■□□□□ 0.35
RAB5C-205ENST00000550013 ASTLQ6HA08 431 aaPredicted RBP17.21■□□□□ 0.35
RAB5C-205ENST00000550013 NCAPH2Q6IBW4 605 aa17.21■□□□□ 0.35
RAB5C-205ENST00000550013 PPP4R3AQ6IN85 833 aa17.21■□□□□ 0.35
RAB5C-205ENST00000550013 PIK3AP1Q6ZUJ8 805 aa17.21■□□□□ 0.35
RAB5C-205ENST00000550013 C4orf19Q8IY42 314 aa17.21■□□□□ 0.35
RAB5C-205ENST00000550013 RNF149Q8NC42 400 aa17.21■□□□□ 0.35
RAB5C-205ENST00000550013 SMG8Q8ND04 991 aaKnown RBP17.21■□□□□ 0.35
RAB5C-205ENST00000550013 DYDC2Q96IM9 177 aa17.21■□□□□ 0.35
RAB5C-205ENST00000550013 TMEM175Q9BSA9 504 aa17.21■□□□□ 0.35
RAB5C-205ENST00000550013 TM6SF1Q9BZW5 370 aa17.21■□□□□ 0.35
RAB5C-205ENST00000550013 MFSD1Q9H3U5 465 aa17.21■□□□□ 0.35
RAB5C-205ENST00000550013 MRPL17Q9NRX2 175 aaKnown RBP17.21■□□□□ 0.35
RAB5C-205ENST00000550013 MARCH5Q9NX47 278 aa17.21■□□□□ 0.35
RAB5C-205ENST00000550013 PRG3Q9Y2Y8 225 aaPredicted RBP17.21■□□□□ 0.35
RAB5C-205ENST00000550013 TDRD15B5MCY1 1934 aaKnown RBP17.21■□□□□ 0.35
RAB5C-205ENST00000550013 GCFC2P16383 781 aaKnown RBP17.2■□□□□ 0.34
RAB5C-205ENST00000550013 NCLP19338 710 aaKnown RBP17.2■□□□□ 0.34
RAB5C-205ENST00000550013 SCRN1Q12765 414 aa17.2■□□□□ 0.34
RAB5C-205ENST00000550013 CTTNQ14247 550 aaKnown RBP17.2■□□□□ 0.34
RAB5C-205ENST00000550013 XKR9Q5GH70 373 aa17.2■□□□□ 0.34
RAB5C-205ENST00000550013 EARS2Q5JPH6 523 aaKnown RBP17.2■□□□□ 0.34
RAB5C-205ENST00000550013 CCDC149Q6ZUS6 474 aa17.2■□□□□ 0.34
RAB5C-205ENST00000550013 TAS1R1Q7RTX1 841 aa17.2■□□□□ 0.34
RAB5C-205ENST00000550013 FERMT3Q86UX7 667 aa17.2■□□□□ 0.34
RAB5C-205ENST00000550013 POTEDQ86YR6 584 aa17.2■□□□□ 0.34
RAB5C-205ENST00000550013 EXOC8Q8IYI6 725 aa17.2■□□□□ 0.34
RAB5C-205ENST00000550013 ACSF2Q96CM8 615 aaPredicted RBP17.2■□□□□ 0.34
RAB5C-205ENST00000550013 EIF2AQ9BY44 585 aaKnown RBP17.2■□□□□ 0.34
RAB5C-205ENST00000550013 RNF39Q9H2S5 420 aa17.2■□□□□ 0.34
RAB5C-205ENST00000550013 PDRG1Q9NUG6 133 aa17.2■□□□□ 0.34
RAB5C-205ENST00000550013 KANSL3Q9P2N6 904 aa17.2■□□□□ 0.34
RAB5C-205ENST00000550013 PPME1Q9Y570 386 aa17.2■□□□□ 0.34
RAB5C-205ENST00000550013 WDR87Q6ZQQ6 2873 aa17.2■□□□□ 0.34
RAB5C-205ENST00000550013 FAM186AA6NE01 2351 aa17.2■□□□□ 0.34
RAB5C-205ENST00000550013 FAM205CA6NFA0 338 aa17.19■□□□□ 0.34
RAB5C-205ENST00000550013 F8W810 466 aa17.19■□□□□ 0.34
RAB5C-205ENST00000550013 MARCH6O60337 910 aa17.19■□□□□ 0.34
RAB5C-205ENST00000550013 TSPAN1O60635 241 aa17.19■□□□□ 0.34
RAB5C-205ENST00000550013 SOD2P04179 222 aa17.19■□□□□ 0.34
RAB5C-205ENST00000550013 MYBP10242 640 aa17.19■□□□□ 0.34
RAB5C-205ENST00000550013 ITGA4P13612 1032 aa17.19■□□□□ 0.34
RAB5C-205ENST00000550013 AK2P54819 239 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms