RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 LRRC71Q8N4P6 559 aa16.09■□□□□ 0.17
CUX1-214ENST00000550008 WHAMMQ8TF30 809 aa16.09■□□□□ 0.17
CUX1-214ENST00000550008 SPATA33Q96N06 139 aa16.09■□□□□ 0.17
CUX1-214ENST00000550008 DNAJC7Q99615 494 aa16.09■□□□□ 0.17
CUX1-214ENST00000550008 TRIM51Q9BSJ1 452 aa16.09■□□□□ 0.17
CUX1-214ENST00000550008 ODF2LQ9ULJ1 636 aa16.09■□□□□ 0.17
CUX1-214ENST00000550008 KIF13AQ9H1H9 1805 aa16.09■□□□□ 0.17
CUX1-214ENST00000550008 PIK3R2O00459 728 aa16.09■□□□□ 0.17
CUX1-214ENST00000550008 TLR3O15455 904 aaKnown RBP16.09■□□□□ 0.17
CUX1-214ENST00000550008 ZRANB2O95218 330 aaKnown RBP eCLIP16.09■□□□□ 0.17
CUX1-214ENST00000550008 ABL1P00519 1130 aa16.09■□□□□ 0.17
CUX1-214ENST00000550008 ZNF667Q5HYK9 610 aa16.09■□□□□ 0.17
CUX1-214ENST00000550008 JPH2Q9BR39 696 aaPredicted RBP16.09■□□□□ 0.17
CUX1-214ENST00000550008 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.09■□□□□ 0.171e-6■■■□□ 16.1
CUX1-214ENST00000550008 ADAM33Q9BZ11 813 aa16.09■□□□□ 0.17
CUX1-214ENST00000550008 NUB1Q9Y5A7 615 aa16.09■□□□□ 0.17
CUX1-214ENST00000550008 ALDH3A1P30838 453 aa16.09■□□□□ 0.17
CUX1-214ENST00000550008 ZNF131P52739 623 aa16.09■□□□□ 0.17
CUX1-214ENST00000550008 GKAP1Q5VSY0 366 aaPredicted RBP16.09■□□□□ 0.17
CUX1-214ENST00000550008 EHD4Q9H223 541 aa16.09■□□□□ 0.17
CUX1-214ENST00000550008 GAKO14976 1311 aa16.09■□□□□ 0.17
CUX1-214ENST00000550008 A6NNZ2 444 aa16.08■□□□□ 0.17
CUX1-214ENST00000550008 TTI1O43156 1089 aa16.08■□□□□ 0.17
CUX1-214ENST00000550008 CARSP49589 748 aaKnown RBP16.08■□□□□ 0.17
CUX1-214ENST00000550008 TAF12Q16514 161 aa16.08■□□□□ 0.17
CUX1-214ENST00000550008 KCTD19Q17RG1 926 aaPredicted RBP16.08■□□□□ 0.17
CUX1-214ENST00000550008 TUBB8Q3ZCM7 444 aa16.08■□□□□ 0.17
CUX1-214ENST00000550008 CATSPER4Q7RTX7 472 aa16.08■□□□□ 0.17
CUX1-214ENST00000550008 GPD1LQ8N335 351 aa16.08■□□□□ 0.17
CUX1-214ENST00000550008 STK33Q9BYT3 514 aa16.08■□□□□ 0.17
CUX1-214ENST00000550008 STK38LQ9Y2H1 464 aa16.08■□□□□ 0.17
CUX1-214ENST00000550008 PI4K2BG5E9Z4 385 aa16.08■□□□□ 0.16
CUX1-214ENST00000550008 GOLGA8MH3BSY2 632 aa16.08■□□□□ 0.16
CUX1-214ENST00000550008 PLS3P13797 630 aa16.08■□□□□ 0.16
CUX1-214ENST00000550008 GNA15P30679 374 aa16.08■□□□□ 0.16
CUX1-214ENST00000550008 ZNF699Q32M78 642 aa16.08■□□□□ 0.16
CUX1-214ENST00000550008 TKFCQ3LXA3 575 aa16.08■□□□□ 0.16
CUX1-214ENST00000550008 CBWD2Q8IUF1 395 aa16.08■□□□□ 0.16
CUX1-214ENST00000550008 THOC1Q96FV9 657 aaKnown RBP16.08■□□□□ 0.16
CUX1-214ENST00000550008 POP1Q99575 1024 aaKnown RBP16.08■□□□□ 0.16
CUX1-214ENST00000550008 TARS2Q9BW92 718 aaKnown RBP16.08■□□□□ 0.16
CUX1-214ENST00000550008 FBXO40Q9UH90 709 aa16.08■□□□□ 0.16
CUX1-214ENST00000550008 BAIAP2L1Q9UHR4 511 aa16.08■□□□□ 0.16
CUX1-214ENST00000550008 FAM237AA0A1B0GTK4 181 aa16.08■□□□□ 0.16
CUX1-214ENST00000550008 ITIH3Q06033 890 aa16.08■□□□□ 0.16
CUX1-214ENST00000550008 HSPH1Q92598 858 aa16.08■□□□□ 0.16
CUX1-214ENST00000550008 GMCL1Q96IK5 515 aa16.08■□□□□ 0.16
CUX1-214ENST00000550008 RIT2Q99578 217 aa16.08■□□□□ 0.16
CUX1-214ENST00000550008 CELF4Q9BZC1 486 aaKnown RBP16.08■□□□□ 0.16
CUX1-214ENST00000550008 TBX2Q13207 712 aaPredicted RBP16.08■□□□□ 0.16
CUX1-214ENST00000550008 MTM1Q13496 603 aa16.08■□□□□ 0.16
CUX1-214ENST00000550008 TMED2Q15363 201 aa16.08■□□□□ 0.16
CUX1-214ENST00000550008 BBS9Q3SYG4 887 aa16.08■□□□□ 0.16
CUX1-214ENST00000550008 PPP6R3Q5H9R7 873 aaPredicted RBP16.08■□□□□ 0.16
CUX1-214ENST00000550008 WNT10BO00744 389 aa16.07■□□□□ 0.16
CUX1-214ENST00000550008 RASGRF2O14827 1237 aa16.07■□□□□ 0.16
CUX1-214ENST00000550008 PON1P27169 355 aa16.07■□□□□ 0.16
CUX1-214ENST00000550008 TRIM50Q86XT4 487 aa16.07■□□□□ 0.16
CUX1-214ENST00000550008 OR2W6PQ8NHA6 318 aa16.07■□□□□ 0.16
CUX1-214ENST00000550008 TRIM11Q96F44 468 aa16.07■□□□□ 0.16
CUX1-214ENST00000550008 RRP15Q9Y3B9 282 aaKnown RBP16.07■□□□□ 0.16
CUX1-214ENST00000550008 XRN1Q8IZH2 1706 aaKnown RBP16.07■□□□□ 0.16
CUX1-214ENST00000550008 FOXN3O00409 490 aaPredicted RBP16.07■□□□□ 0.16
CUX1-214ENST00000550008 KRT14P02533 472 aa16.07■□□□□ 0.16
CUX1-214ENST00000550008 MAN1A1P33908 653 aa16.07■□□□□ 0.16
CUX1-214ENST00000550008 PPP2R5CQ13362 524 aa16.07■□□□□ 0.16
CUX1-214ENST00000550008 DGKZQ13574 1117 aa16.07■□□□□ 0.16
CUX1-214ENST00000550008 NEDD9Q14511 834 aa16.07■□□□□ 0.16
CUX1-214ENST00000550008 CROCCP2Q86T23 111 aa16.07■□□□□ 0.16
CUX1-214ENST00000550008 GDAP1Q8TB36 358 aa16.07■□□□□ 0.16
CUX1-214ENST00000550008 HAS1Q92839 578 aa16.07■□□□□ 0.16
CUX1-214ENST00000550008 SLC5A4Q9NY91 659 aa16.07■□□□□ 0.16
CUX1-214ENST00000550008 DMGDHQ9UI17 866 aaKnown RBP16.07■□□□□ 0.16
CUX1-214ENST00000550008 ICAM1P05362 532 aa16.07■□□□□ 0.16
CUX1-214ENST00000550008 PSMA2P25787 234 aa16.07■□□□□ 0.16
CUX1-214ENST00000550008 KCNJ1P48048 391 aa16.07■□□□□ 0.16
CUX1-214ENST00000550008 CASP5P51878 434 aa16.07■□□□□ 0.16
CUX1-214ENST00000550008 SNX16P57768 344 aa16.07■□□□□ 0.16
CUX1-214ENST00000550008 OR6B3Q8NGW1 331 aa16.07■□□□□ 0.16
CUX1-214ENST00000550008 POLR3CQ9BUI4 534 aaPredicted RBP16.07■□□□□ 0.16
CUX1-214ENST00000550008 NAGPAQ9UK23 515 aa16.07■□□□□ 0.16
CUX1-214ENST00000550008 RNF225M0QZC1 329 aaPredicted RBP16.06■□□□□ 0.16
CUX1-214ENST00000550008 DGAT1O75907 488 aa16.06■□□□□ 0.16
CUX1-214ENST00000550008 ALS2CLQ60I27 953 aa16.06■□□□□ 0.16
CUX1-214ENST00000550008 KCTD6Q8NC69 237 aa16.06■□□□□ 0.16
CUX1-214ENST00000550008 FBXL5Q9UKA1 691 aa16.06■□□□□ 0.16
CUX1-214ENST00000550008 EPHB6O15197 1021 aa16.06■□□□□ 0.16
CUX1-214ENST00000550008 TXNP10599 105 aaKnown RBP16.06■□□□□ 0.16
CUX1-214ENST00000550008 SAT1P21673 171 aa16.06■□□□□ 0.16
CUX1-214ENST00000550008 NAB2Q15742 525 aa16.06■□□□□ 0.16
CUX1-214ENST00000550008 SMAD1Q15797 465 aaKnown RBP16.06■□□□□ 0.16
CUX1-214ENST00000550008 AGBL3Q8NEM8 1001 aa16.06■□□□□ 0.16
CUX1-214ENST00000550008 KLRC4O43908 158 aa16.06■□□□□ 0.16
CUX1-214ENST00000550008 LDHAP00338 332 aaKnown RBP16.06■□□□□ 0.16
CUX1-214ENST00000550008 SCP2P22307 547 aa16.06■□□□□ 0.16
CUX1-214ENST00000550008 PURBQ96QR8 312 aaKnown RBP16.06■□□□□ 0.16
CUX1-214ENST00000550008 ATRNO75882 1429 aa16.06■□□□□ 0.16
CUX1-214ENST00000550008 WDR91A4D1P6 747 aa16.05■□□□□ 0.16
CUX1-214ENST00000550008 TISP43B9A030 160 aa16.05■□□□□ 0.16
CUX1-214ENST00000550008 VCAM1P19320 739 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms