RNA–Protein interactions for RNA: ENST00000549396.5

PPFIA2-216, Transcript of PTPRF interacting protein alpha 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA2, Length 5,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-216ENST00000549396 TRAPPC11Q7Z392 1133 aa9.89□□□□□ -0.83
PPFIA2-216ENST00000549396 SCG3Q8WXD2 468 aaKnown RBP9.89□□□□□ -0.83
PPFIA2-216ENST00000549396 PARVAQ9NVD7 372 aa9.89□□□□□ -0.83
PPFIA2-216ENST00000549396 KLHL14Q9P2G3 628 aa9.89□□□□□ -0.83
PPFIA2-216ENST00000549396 PPP1R9AQ9ULJ8 1098 aa9.89□□□□□ -0.83
PPFIA2-216ENST00000549396 PXDNQ92626 1479 aa9.89□□□□□ -0.83
PPFIA2-216ENST00000549396 IQANK1A0A1B0GTG1 560 aa9.88□□□□□ -0.83
PPFIA2-216ENST00000549396 SSU72P8A0A1W2PR75 194 aa9.88□□□□□ -0.83
PPFIA2-216ENST00000549396 GOLGA8MH3BSY2 632 aa9.88□□□□□ -0.83
PPFIA2-216ENST00000549396 NDUFAB1O14561 156 aa9.88□□□□□ -0.83
PPFIA2-216ENST00000549396 TBC1D12O60347 775 aa9.88□□□□□ -0.83
PPFIA2-216ENST00000549396 TPD52P55327 224 aaPredicted RBP9.88□□□□□ -0.83
PPFIA2-216ENST00000549396 NFX1Q12986 1120 aaKnown RBP9.88□□□□□ -0.83
PPFIA2-216ENST00000549396 EMBQ6PCB8 327 aa9.88□□□□□ -0.83
PPFIA2-216ENST00000549396 THNSL1Q8IYQ7 743 aa9.88□□□□□ -0.83
PPFIA2-216ENST00000549396 TSPAN18Q96SJ8 248 aa9.88□□□□□ -0.83
PPFIA2-216ENST00000549396 EPB41L4AQ9HCS5 686 aaPredicted RBP9.88□□□□□ -0.83
PPFIA2-216ENST00000549396 VTA1Q9NP79 307 aa9.88□□□□□ -0.83
PPFIA2-216ENST00000549396 CFAP69A5D8W1 941 aa9.88□□□□□ -0.83
PPFIA2-216ENST00000549396 E9PMD0 336 aa9.88□□□□□ -0.83
PPFIA2-216ENST00000549396 CELF2O95319 508 aaKnown RBP9.88□□□□□ -0.83
PPFIA2-216ENST00000549396 SREBF1P36956 1147 aa9.88□□□□□ -0.83
PPFIA2-216ENST00000549396 SLFNL1Q499Z3 407 aa9.88□□□□□ -0.83
PPFIA2-216ENST00000549396 C9orf131Q5VYM1 1079 aa9.88□□□□□ -0.83
PPFIA2-216ENST00000549396 NOTUMQ6P988 496 aa9.88□□□□□ -0.83
PPFIA2-216ENST00000549396 EP400NLQ6ZTU2 488 aa9.88□□□□□ -0.83
PPFIA2-216ENST00000549396 PDIK1LQ8N165 341 aa9.88□□□□□ -0.83
PPFIA2-216ENST00000549396 APPL2Q8NEU8 664 aa9.88□□□□□ -0.83
PPFIA2-216ENST00000549396 KRT35Q92764 455 aa9.88□□□□□ -0.83
PPFIA2-216ENST00000549396 LSM7Q9UK45 103 aaKnown RBP9.88□□□□□ -0.83
PPFIA2-216ENST00000549396 DSEQ9UL01 958 aa9.88□□□□□ -0.83
PPFIA2-216ENST00000549396 GPR182O15218 404 aa9.88□□□□□ -0.83
PPFIA2-216ENST00000549396 BUB1O43683 1085 aa9.88□□□□□ -0.83
PPFIA2-216ENST00000549396 SORBS3O60504 671 aa9.88□□□□□ -0.83
PPFIA2-216ENST00000549396 CABYRO75952 493 aa9.88□□□□□ -0.83
PPFIA2-216ENST00000549396 CDK17Q00537 523 aa9.88□□□□□ -0.83
PPFIA2-216ENST00000549396 EHHADHQ08426 723 aa9.88□□□□□ -0.83
PPFIA2-216ENST00000549396 MICAL1Q8TDZ2 1067 aa9.88□□□□□ -0.83
PPFIA2-216ENST00000549396 SEPT10Q9P0V9 454 aa9.88□□□□□ -0.83
PPFIA2-216ENST00000549396 INTUQ9ULD6 942 aa9.88□□□□□ -0.83
PPFIA2-216ENST00000549396 TACC3Q9Y6A5 838 aa9.88□□□□□ -0.83
PPFIA2-216ENST00000549396 EXTL3O43909 919 aa9.88□□□□□ -0.83
PPFIA2-216ENST00000549396 SOX5P35711 763 aa9.88□□□□□ -0.83
PPFIA2-216ENST00000549396 MNAT1P51948 309 aa9.88□□□□□ -0.83
PPFIA2-216ENST00000549396 RPS6KA2Q15349 733 aa9.88□□□□□ -0.83
PPFIA2-216ENST00000549396 FAM213AQ9BRX8 229 aa9.88□□□□□ -0.83
PPFIA2-216ENST00000549396 TRIM9Q9C026 710 aa9.88□□□□□ -0.83
PPFIA2-216ENST00000549396 MRGBPQ9NV56 204 aa9.88□□□□□ -0.83
PPFIA2-216ENST00000549396 CLTAP09496 248 aa9.88□□□□□ -0.83
PPFIA2-216ENST00000549396 ADCY2Q08462 1091 aa9.88□□□□□ -0.83
PPFIA2-216ENST00000549396 ANKRD23Q86SG2 305 aa9.88□□□□□ -0.83
PPFIA2-216ENST00000549396 SDCCAG8Q86SQ7 713 aaPredicted RBP9.88□□□□□ -0.83
PPFIA2-216ENST00000549396 PIGOQ8TEQ8 1089 aa9.88□□□□□ -0.83
PPFIA2-216ENST00000549396 MCUR1Q96AQ8 359 aa9.88□□□□□ -0.83
PPFIA2-216ENST00000549396 TRIM31Q9BZY9 425 aa9.88□□□□□ -0.83
PPFIA2-216ENST00000549396 TMEM260Q9NX78 707 aa9.88□□□□□ -0.83
PPFIA2-216ENST00000549396 DBR1Q9UK59 544 aaKnown RBP9.88□□□□□ -0.83
PPFIA2-216ENST00000549396 C17orf102A2RUQ5 167 aa9.87□□□□□ -0.83
PPFIA2-216ENST00000549396 MSCO60682 206 aa9.87□□□□□ -0.83
PPFIA2-216ENST00000549396 CYBBP04839 570 aa9.87□□□□□ -0.83
PPFIA2-216ENST00000549396 AXLP30530 894 aa9.87□□□□□ -0.83
PPFIA2-216ENST00000549396 NT5DC4Q86YG4 428 aa9.87□□□□□ -0.83
PPFIA2-216ENST00000549396 RHOT1Q8IXI2 618 aa9.87□□□□□ -0.83
PPFIA2-216ENST00000549396 STKLD1Q8NE28 680 aa9.87□□□□□ -0.83
PPFIA2-216ENST00000549396 NUDCD1Q96RS6 583 aa9.87□□□□□ -0.83
PPFIA2-216ENST00000549396 LMCD1Q9NZU5 365 aa9.87□□□□□ -0.83
PPFIA2-216ENST00000549396 CNOT8Q9UFF9 292 aaKnown RBP9.87□□□□□ -0.83
PPFIA2-216ENST00000549396 TTLL3Q9Y4R7 772 aa9.87□□□□□ -0.83
PPFIA2-216ENST00000549396 NMT2O60551 498 aa9.87□□□□□ -0.83
PPFIA2-216ENST00000549396 TDP2O95551 362 aa9.87□□□□□ -0.83
PPFIA2-216ENST00000549396 MSH2P43246 934 aa9.87□□□□□ -0.83
PPFIA2-216ENST00000549396 CASP7P55210 303 aa9.87□□□□□ -0.83
PPFIA2-216ENST00000549396 ELAVL2Q12926 359 aaKnown RBP9.87□□□□□ -0.83
PPFIA2-216ENST00000549396 KLHL38Q2WGJ6 581 aa9.87□□□□□ -0.83
PPFIA2-216ENST00000549396 CCDC144BQ3MJ40 725 aa9.87□□□□□ -0.83
PPFIA2-216ENST00000549396 GLB1LQ6UWU2 654 aa9.87□□□□□ -0.83
PPFIA2-216ENST00000549396 VSIG1Q86XK7 387 aa9.87□□□□□ -0.83
PPFIA2-216ENST00000549396 PLCD3Q8N3E9 789 aa9.87□□□□□ -0.83
PPFIA2-216ENST00000549396 SEZ6LQ9BYH1 1024 aa9.87□□□□□ -0.83
PPFIA2-216ENST00000549396 STK33Q9BYT3 514 aa9.87□□□□□ -0.83
PPFIA2-216ENST00000549396 RSPH14Q9UHP6 348 aa9.87□□□□□ -0.83
PPFIA2-216ENST00000549396 TLK1Q9UKI8 766 aa9.87□□□□□ -0.83
PPFIA2-216ENST00000549396 RTN2O75298 545 aa9.87□□□□□ -0.83
PPFIA2-216ENST00000549396 EGFRP00533 1210 aa9.87□□□□□ -0.83
PPFIA2-216ENST00000549396 TAC1P20366 129 aa9.87□□□□□ -0.83
PPFIA2-216ENST00000549396 GARTP22102 1010 aa9.87□□□□□ -0.83
PPFIA2-216ENST00000549396 GNA15P30679 374 aa9.87□□□□□ -0.83
PPFIA2-216ENST00000549396 CHRNA3P32297 505 aa9.87□□□□□ -0.83
PPFIA2-216ENST00000549396 ARL4CP56559 192 aa9.87□□□□□ -0.83
PPFIA2-216ENST00000549396 YWHAGP61981 247 aaKnown RBP eCLIP9.87□□□□□ -0.83
PPFIA2-216ENST00000549396 TMEM132DQ14C87 1099 aa9.87□□□□□ -0.83
PPFIA2-216ENST00000549396 STOX1Q6ZVD7 989 aa9.87□□□□□ -0.83
PPFIA2-216ENST00000549396 ZNF526Q8TF50 670 aaPredicted RBP9.87□□□□□ -0.83
PPFIA2-216ENST00000549396 GLT1D1Q96MS3 346 aa9.87□□□□□ -0.83
PPFIA2-216ENST00000549396 UIMC1Q96RL1 719 aa9.87□□□□□ -0.83
PPFIA2-216ENST00000549396 TSSK1BQ9BXA7 367 aa9.87□□□□□ -0.83
PPFIA2-216ENST00000549396 SLITRK6Q9H5Y7 841 aa9.87□□□□□ -0.83
PPFIA2-216ENST00000549396 POLLQ9UGP5 575 aa9.87□□□□□ -0.83
PPFIA2-216ENST00000549396 GOLGA8SH3BPF8 625 aa9.87□□□□□ -0.83
PPFIA2-216ENST00000549396 PPP1R12AO14974 1030 aaPredicted RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms