RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 VN1R3Q9BXE9 311 aa19.4■□□□□ 0.7
CHMP1A-205ENST00000548650 CDH22Q9UJ99 828 aa19.4■□□□□ 0.7
CHMP1A-205ENST00000548650 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.39■□□□□ 0.69
CHMP1A-205ENST00000548650 SEC24BO95487 1268 aa19.39■□□□□ 0.69
CHMP1A-205ENST00000548650 GALTP07902 379 aa19.39■□□□□ 0.69
CHMP1A-205ENST00000548650 HOXB8P17481 243 aaPredicted RBP19.39■□□□□ 0.69
CHMP1A-205ENST00000548650 DDX53Q86TM3 631 aaKnown RBP19.39■□□□□ 0.69
CHMP1A-205ENST00000548650 ZNF280BQ86YH2 543 aa19.39■□□□□ 0.69
CHMP1A-205ENST00000548650 VPS52Q8N1B4 723 aa19.39■□□□□ 0.69
CHMP1A-205ENST00000548650 AUTS2Q8WXX7 1259 aa19.39■□□□□ 0.69
CHMP1A-205ENST00000548650 MTMR9Q96QG7 549 aa19.39■□□□□ 0.69
CHMP1A-205ENST00000548650 TTC12Q9H892 705 aaPredicted RBP19.39■□□□□ 0.69
CHMP1A-205ENST00000548650 RSAD1Q9HA92 442 aa19.39■□□□□ 0.69
CHMP1A-205ENST00000548650 PCDHA12Q9UN75 941 aa19.39■□□□□ 0.69
CHMP1A-205ENST00000548650 IRAK3Q9Y616 596 aa19.39■□□□□ 0.69
CHMP1A-205ENST00000548650 CNTNAP2Q9UHC6 1331 aa19.39■□□□□ 0.69
CHMP1A-205ENST00000548650 ASAP2O43150 1006 aa19.38■□□□□ 0.69
CHMP1A-205ENST00000548650 TSPAN1O60635 241 aa19.38■□□□□ 0.69
CHMP1A-205ENST00000548650 CTSAP10619 480 aa19.38■□□□□ 0.69
CHMP1A-205ENST00000548650 HOXD11P31277 338 aaPredicted RBP19.38■□□□□ 0.69
CHMP1A-205ENST00000548650 AFF1P51825 1210 aaKnown RBP19.38■□□□□ 0.69
CHMP1A-205ENST00000548650 RNASELQ05823 741 aaKnown RBP19.38■□□□□ 0.69
CHMP1A-205ENST00000548650 CAPSQ13938 189 aa19.38■□□□□ 0.69
CHMP1A-205ENST00000548650 TRIM29Q14134 588 aa19.38■□□□□ 0.69
CHMP1A-205ENST00000548650 IFNLR1Q8IU57 520 aaPredicted RBP19.38■□□□□ 0.69
CHMP1A-205ENST00000548650 URGCPQ8TCY9 931 aa19.38■□□□□ 0.69
CHMP1A-205ENST00000548650 ASAP3Q8TDY4 903 aa19.38■□□□□ 0.69
CHMP1A-205ENST00000548650 GBP3Q9H0R5 595 aa19.38■□□□□ 0.69
CHMP1A-205ENST00000548650 ZDBF2Q9HCK1 2354 aa19.38■□□□□ 0.69
CHMP1A-205ENST00000548650 ANKEF1Q9NU02 776 aa19.38■□□□□ 0.69
CHMP1A-205ENST00000548650 POTEMA6NI47 508 aa19.37■□□□□ 0.69
CHMP1A-205ENST00000548650 DGAT1O75907 488 aa19.37■□□□□ 0.69
CHMP1A-205ENST00000548650 DDHD2O94830 711 aa19.37■□□□□ 0.69
CHMP1A-205ENST00000548650 ERLIN2O94905 339 aa19.37■□□□□ 0.69
CHMP1A-205ENST00000548650 NCLP19338 710 aaKnown RBP19.37■□□□□ 0.69
CHMP1A-205ENST00000548650 CA8P35219 290 aa19.37■□□□□ 0.69
CHMP1A-205ENST00000548650 RARRES1P49788 294 aa19.37■□□□□ 0.69
CHMP1A-205ENST00000548650 PTENP60484 403 aa19.37■□□□□ 0.69
CHMP1A-205ENST00000548650 MXD4Q14582 209 aaPredicted RBP19.37■□□□□ 0.69
CHMP1A-205ENST00000548650 PCBP1Q15365 356 aaKnown RBP eCLIP19.37■□□□□ 0.69
CHMP1A-205ENST00000548650 TPRNQ4KMQ1 711 aa19.37■□□□□ 0.69
CHMP1A-205ENST00000548650 SMG8Q8ND04 991 aaKnown RBP19.37■□□□□ 0.69
CHMP1A-205ENST00000548650 TMEM60Q9H2L4 133 aa19.37■□□□□ 0.69
CHMP1A-205ENST00000548650 C2orf16Q68DN1 1984 aa19.37■□□□□ 0.69
CHMP1A-205ENST00000548650 EIF5BO60841 1220 aaKnown RBP19.36■□□□□ 0.69
CHMP1A-205ENST00000548650 CXCL14O95715 111 aa19.36■□□□□ 0.69
CHMP1A-205ENST00000548650 TXKP42681 527 aa19.36■□□□□ 0.69
CHMP1A-205ENST00000548650 ZXDAP98168 799 aa19.36■□□□□ 0.69
CHMP1A-205ENST00000548650 MBTD1Q05BQ5 628 aa19.36■□□□□ 0.69
CHMP1A-205ENST00000548650 PTPN14Q15678 1187 aa19.36■□□□□ 0.69
CHMP1A-205ENST00000548650 AMHR2Q16671 573 aa19.36■□□□□ 0.69
CHMP1A-205ENST00000548650 TRIM67Q6ZTA4 783 aa19.36■□□□□ 0.69
CHMP1A-205ENST00000548650 CCDC51Q96ER9 411 aa19.36■□□□□ 0.69
CHMP1A-205ENST00000548650 EIF2AQ9BY44 585 aaKnown RBP19.36■□□□□ 0.69
CHMP1A-205ENST00000548650 ADAM7Q9H2U9 754 aa19.36■□□□□ 0.69
CHMP1A-205ENST00000548650 IPPQ9Y573 584 aa19.36■□□□□ 0.69
CHMP1A-205ENST00000548650 PLXNA3P51805 1871 aa19.36■□□□□ 0.69
CHMP1A-205ENST00000548650 TMEM221A6NGB7 291 aa19.35■□□□□ 0.69
CHMP1A-205ENST00000548650 INO80B-WBP1J3KQ70 363 aa19.35■□□□□ 0.69
CHMP1A-205ENST00000548650 M0R296 226 aa19.35■□□□□ 0.69
CHMP1A-205ENST00000548650 INPPL1O15357 1258 aa19.35■□□□□ 0.69
CHMP1A-205ENST00000548650 EPCAMP16422 314 aa19.35■□□□□ 0.69
CHMP1A-205ENST00000548650 GLRA2P23416 452 aa19.35■□□□□ 0.69
CHMP1A-205ENST00000548650 AXLP30530 894 aa19.35■□□□□ 0.69
CHMP1A-205ENST00000548650 ARL2P36404 184 aa19.35■□□□□ 0.69
CHMP1A-205ENST00000548650 ITIH3Q06033 890 aa19.35■□□□□ 0.69
CHMP1A-205ENST00000548650 POU5F1BQ06416 359 aa19.35■□□□□ 0.69
CHMP1A-205ENST00000548650 GIT2Q14161 759 aa19.35■□□□□ 0.69
CHMP1A-205ENST00000548650 TFDP1Q14186 410 aa19.35■□□□□ 0.69
CHMP1A-205ENST00000548650 BMS1Q14692 1282 aaKnown RBP19.35■□□□□ 0.69
CHMP1A-205ENST00000548650 NOTUMQ6P988 496 aa19.35■□□□□ 0.69
CHMP1A-205ENST00000548650 PIGOQ8TEQ8 1089 aa19.35■□□□□ 0.69
CHMP1A-205ENST00000548650 CPB2Q96IY4 423 aa19.35■□□□□ 0.69
CHMP1A-205ENST00000548650 CCDC43Q96MW1 224 aaKnown RBP19.35■□□□□ 0.69
CHMP1A-205ENST00000548650 TMEM175Q9BSA9 504 aa19.35■□□□□ 0.69
CHMP1A-205ENST00000548650 NFKBIZQ9BYH8 718 aa19.35■□□□□ 0.69
CHMP1A-205ENST00000548650 POMKQ9H5K3 350 aa19.35■□□□□ 0.69
CHMP1A-205ENST00000548650 DZANK1Q9NVP4 752 aa19.35■□□□□ 0.69
CHMP1A-205ENST00000548650 POMCP01189 267 aa19.34■□□□□ 0.69
CHMP1A-205ENST00000548650 SPATA31C1P0DKV0 1188 aa19.34■□□□□ 0.69
CHMP1A-205ENST00000548650 SP100P23497 879 aaPredicted RBP19.34■□□□□ 0.69
CHMP1A-205ENST00000548650 MCM7P33993 719 aa19.34■□□□□ 0.69
CHMP1A-205ENST00000548650 GUCY1B3Q02153 619 aa19.34■□□□□ 0.69
CHMP1A-205ENST00000548650 PTPN21Q16825 1174 aa19.34■□□□□ 0.69
CHMP1A-205ENST00000548650 BMP8AQ7Z5Y6 402 aa19.34■□□□□ 0.69
CHMP1A-205ENST00000548650 CNNM3Q8NE01 707 aa19.34■□□□□ 0.69
CHMP1A-205ENST00000548650 SLC22A17Q8WUG5 538 aa19.34■□□□□ 0.69
CHMP1A-205ENST00000548650 NECTIN4Q96NY8 510 aa19.34■□□□□ 0.69
CHMP1A-205ENST00000548650 POLR3FQ9H1D9 316 aaPredicted RBP19.34■□□□□ 0.69
CHMP1A-205ENST00000548650 MARCH5Q9NX47 278 aa19.34■□□□□ 0.69
CHMP1A-205ENST00000548650 KANSL3Q9P2N6 904 aa19.34■□□□□ 0.69
CHMP1A-205ENST00000548650 B4GALT5O43286 388 aa19.33■□□□□ 0.68
CHMP1A-205ENST00000548650 USO1O60763 962 aaKnown RBP19.33■□□□□ 0.68
CHMP1A-205ENST00000548650 ITGA4P13612 1032 aa19.33■□□□□ 0.68
CHMP1A-205ENST00000548650 ARF4P18085 180 aaPredicted RBP19.33■□□□□ 0.68
CHMP1A-205ENST00000548650 MLH1P40692 756 aa19.33■□□□□ 0.68
CHMP1A-205ENST00000548650 CES5AQ6NT32 575 aa19.33■□□□□ 0.68
CHMP1A-205ENST00000548650 CCDC83Q8IWF9 413 aa19.33■□□□□ 0.68
CHMP1A-205ENST00000548650 MFSD14AQ96MC6 490 aa19.33■□□□□ 0.68
CHMP1A-205ENST00000548650 CSRNP2Q9H175 543 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms