RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 TLDC2A0PJX2 215 aa10.65□□□□□ -0.7
SMARCD1-205ENST00000548573 FOXN3O00409 490 aaPredicted RBP10.65□□□□□ -0.7
SMARCD1-205ENST00000548573 OPLAHO14841 1288 aa10.65□□□□□ -0.7
SMARCD1-205ENST00000548573 RIMBP2O15034 1052 aa10.65□□□□□ -0.7
SMARCD1-205ENST00000548573 RIPK2O43353 540 aa10.65□□□□□ -0.7
SMARCD1-205ENST00000548573 PSMD10O75832 226 aa10.65□□□□□ -0.7
SMARCD1-205ENST00000548573 TRIM49P0CI25 452 aa10.65□□□□□ -0.7
SMARCD1-205ENST00000548573 TRIM49CP0CI26 452 aa10.65□□□□□ -0.7
SMARCD1-205ENST00000548573 GPC5P78333 572 aa10.65□□□□□ -0.7
SMARCD1-205ENST00000548573 NFIAQ12857 509 aa10.65□□□□□ -0.7
SMARCD1-205ENST00000548573 USH1GQ495M9 461 aa10.65□□□□□ -0.7
SMARCD1-205ENST00000548573 SEL1L2Q5TEA6 688 aa10.65□□□□□ -0.7
SMARCD1-205ENST00000548573 MSL1Q68DK7 614 aa10.65□□□□□ -0.7
SMARCD1-205ENST00000548573 MFSD5Q6N075 450 aa10.65□□□□□ -0.7
SMARCD1-205ENST00000548573 CCDC137Q6PK04 289 aaKnown RBP10.65□□□□□ -0.7
SMARCD1-205ENST00000548573 CYFIP1Q7L576 1253 aa10.65□□□□□ -0.7
SMARCD1-205ENST00000548573 TAOK1Q7L7X3 1001 aa10.65□□□□□ -0.7
SMARCD1-205ENST00000548573 TPH2Q8IWU9 490 aa10.65□□□□□ -0.7
SMARCD1-205ENST00000548573 CYP2W1Q8TAV3 490 aa10.65□□□□□ -0.7
SMARCD1-205ENST00000548573 ROPN1BQ9BZX4 212 aaPredicted RBP10.65□□□□□ -0.7
SMARCD1-205ENST00000548573 NSRP1Q9H0G5 558 aaKnown RBP10.65□□□□□ -0.7
SMARCD1-205ENST00000548573 WNT8AQ9H1J5 351 aa10.65□□□□□ -0.7
SMARCD1-205ENST00000548573 SEMA4AQ9H3S1 761 aa10.65□□□□□ -0.7
SMARCD1-205ENST00000548573 ROPN1Q9HAT0 212 aaPredicted RBP10.65□□□□□ -0.7
SMARCD1-205ENST00000548573 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.65□□□□□ -0.72e-9■■■□□ 15.2
SMARCD1-205ENST00000548573 SAMD15Q9P1V8 674 aa10.65□□□□□ -0.7
SMARCD1-205ENST00000548573 CTTNBP2NLQ9P2B4 639 aa10.65□□□□□ -0.7
SMARCD1-205ENST00000548573 KLRG2A4D1S0 409 aaPredicted RBP10.64□□□□□ -0.71
SMARCD1-205ENST00000548573 CFAP73A6NFT4 308 aa10.64□□□□□ -0.71
SMARCD1-205ENST00000548573 P4HA2O15460 535 aa10.64□□□□□ -0.71
SMARCD1-205ENST00000548573 FTLP02792 175 aaPredicted RBP10.64□□□□□ -0.71
SMARCD1-205ENST00000548573 EZRP15311 586 aaKnown RBP10.64□□□□□ -0.71
SMARCD1-205ENST00000548573 NF2P35240 595 aa10.64□□□□□ -0.71
SMARCD1-205ENST00000548573 PEX5P50542 639 aa10.64□□□□□ -0.71
SMARCD1-205ENST00000548573 SCNN1DP51172 638 aa10.64□□□□□ -0.71
SMARCD1-205ENST00000548573 CYP2J2P51589 502 aa10.64□□□□□ -0.71
SMARCD1-205ENST00000548573 ELF3P78545 371 aaPredicted RBP10.64□□□□□ -0.71
SMARCD1-205ENST00000548573 IFI35P80217 286 aaPredicted RBP10.64□□□□□ -0.71
SMARCD1-205ENST00000548573 ICA1Q05084 483 aa10.64□□□□□ -0.71
SMARCD1-205ENST00000548573 TATDN1Q6P1N9 297 aa10.64□□□□□ -0.71
SMARCD1-205ENST00000548573 TTC27Q6P3X3 843 aa10.64□□□□□ -0.71
SMARCD1-205ENST00000548573 TMEM179Q6ZVK1 233 aa10.64□□□□□ -0.71
SMARCD1-205ENST00000548573 LRRC34Q8IZ02 419 aa10.64□□□□□ -0.71
SMARCD1-205ENST00000548573 TMEM174Q8WUU8 243 aa10.64□□□□□ -0.71
SMARCD1-205ENST00000548573 KRT35Q92764 455 aa10.64□□□□□ -0.71
SMARCD1-205ENST00000548573 ART4Q93070 314 aa10.64□□□□□ -0.71
SMARCD1-205ENST00000548573 DYDC2Q96IM9 177 aa10.64□□□□□ -0.71
SMARCD1-205ENST00000548573 NACC1Q96RE7 527 aa10.64□□□□□ -0.71
SMARCD1-205ENST00000548573 STRA6Q9BX79 667 aa10.64□□□□□ -0.71
SMARCD1-205ENST00000548573 PI4KBQ9UBF8 816 aa10.64□□□□□ -0.71
SMARCD1-205ENST00000548573 ADAMTSL1Q8N6G6 1762 aa10.64□□□□□ -0.71
SMARCD1-205ENST00000548573 UBAP1LF5GYI3 381 aa10.64□□□□□ -0.71
SMARCD1-205ENST00000548573 RASGRF2O14827 1237 aa10.64□□□□□ -0.71
SMARCD1-205ENST00000548573 PPEF1O14829 653 aaPredicted RBP10.64□□□□□ -0.71
SMARCD1-205ENST00000548573 EXOC3O60645 756 aa10.64□□□□□ -0.71
SMARCD1-205ENST00000548573 ATP2C2O75185 946 aa10.64□□□□□ -0.71
SMARCD1-205ENST00000548573 RTN2O75298 545 aa10.64□□□□□ -0.71
SMARCD1-205ENST00000548573 LRRN2O75325 713 aa10.64□□□□□ -0.71
SMARCD1-205ENST00000548573 SLURP2P0DP57 97 aa10.64□□□□□ -0.71
SMARCD1-205ENST00000548573 GYS1P13807 737 aa10.64□□□□□ -0.71
SMARCD1-205ENST00000548573 ELF1P32519 619 aa10.64□□□□□ -0.71
SMARCD1-205ENST00000548573 PRELPP51888 382 aa10.64□□□□□ -0.71
SMARCD1-205ENST00000548573 SNAP25P60880 206 aa10.64□□□□□ -0.71
SMARCD1-205ENST00000548573 CETN1Q12798 172 aa10.64□□□□□ -0.71
SMARCD1-205ENST00000548573 RIPK1Q13546 671 aa10.64□□□□□ -0.71
SMARCD1-205ENST00000548573 LRCH2Q5VUJ6 765 aa10.64□□□□□ -0.71
SMARCD1-205ENST00000548573 AADACL2Q6P093 401 aa10.64□□□□□ -0.71
SMARCD1-205ENST00000548573 KSR1Q8IVT5 923 aa10.64□□□□□ -0.71
SMARCD1-205ENST00000548573 ZFPM1Q8IX07 1006 aa10.64□□□□□ -0.71
SMARCD1-205ENST00000548573 ZDHHC14Q8IZN3 488 aa10.64□□□□□ -0.71
SMARCD1-205ENST00000548573 SLC5A5Q92911 643 aa10.64□□□□□ -0.71
SMARCD1-205ENST00000548573 CD101Q93033 1021 aa10.64□□□□□ -0.71
SMARCD1-205ENST00000548573 PRMT1Q99873 361 aaKnown RBP10.64□□□□□ -0.71
SMARCD1-205ENST00000548573 ZC3H12CQ9C0D7 883 aaKnown RBP10.64□□□□□ -0.71
SMARCD1-205ENST00000548573 MTUS1Q9ULD2 1270 aa10.64□□□□□ -0.71
SMARCD1-205ENST00000548573 AFF2P51816 1311 aa10.63□□□□□ -0.71
SMARCD1-205ENST00000548573 SPATA31A6Q5VVP1 1343 aa10.63□□□□□ -0.71
SMARCD1-205ENST00000548573 PASKQ96RG2 1323 aa10.63□□□□□ -0.71
SMARCD1-205ENST00000548573 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.63□□□□□ -0.71
SMARCD1-205ENST00000548573 ATP6V1G2O95670 118 aa10.63□□□□□ -0.71
SMARCD1-205ENST00000548573 NDUFB10O96000 172 aa10.63□□□□□ -0.71
SMARCD1-205ENST00000548573 GZMAP12544 262 aa10.63□□□□□ -0.71
SMARCD1-205ENST00000548573 COMTP21964 271 aa10.63□□□□□ -0.71
SMARCD1-205ENST00000548573 HOXA13P31271 388 aaPredicted RBP10.63□□□□□ -0.71
SMARCD1-205ENST00000548573 COILP38432 576 aaPredicted RBP10.63□□□□□ -0.71
SMARCD1-205ENST00000548573 TRAF1Q13077 416 aa10.63□□□□□ -0.71
SMARCD1-205ENST00000548573 AUHQ13825 339 aaKnown RBP10.63□□□□□ -0.71
SMARCD1-205ENST00000548573 PPP1R7Q15435 360 aa10.63□□□□□ -0.71
SMARCD1-205ENST00000548573 ZNF568Q3ZCX4 644 aa10.63□□□□□ -0.71
SMARCD1-205ENST00000548573 ODR4Q5SWX8 454 aa10.63□□□□□ -0.71
SMARCD1-205ENST00000548573 CRELD2Q6UXH1 353 aaPredicted RBP10.63□□□□□ -0.71
SMARCD1-205ENST00000548573 INTS8Q75QN2 995 aaKnown RBP10.63□□□□□ -0.71
SMARCD1-205ENST00000548573 TRMT10CQ7L0Y3 403 aaKnown RBP10.63□□□□□ -0.71
SMARCD1-205ENST00000548573 TRPM8Q7Z2W7 1104 aa10.63□□□□□ -0.71
SMARCD1-205ENST00000548573 CEP57Q86XR8 500 aa10.63□□□□□ -0.71
SMARCD1-205ENST00000548573 CCDC63Q8NA47 563 aa10.63□□□□□ -0.71
SMARCD1-205ENST00000548573 C12orf50Q8NA57 414 aaPredicted RBP10.63□□□□□ -0.71
SMARCD1-205ENST00000548573 SLC20A1Q8WUM9 679 aa10.63□□□□□ -0.71
SMARCD1-205ENST00000548573 ZDHHC15Q96MV8 337 aa10.63□□□□□ -0.71
SMARCD1-205ENST00000548573 SCLT1Q96NL6 688 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms