RNA–Protein interactions for RNA: ENST00000548068.5

RAB5B-204, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-204ENST00000548068 RNF149Q8NC42 400 aa13.51□□□□□ -0.25
RAB5B-204ENST00000548068 TRPV1Q8NER1 839 aa13.51□□□□□ -0.25
RAB5B-204ENST00000548068 NEK11Q8NG66 645 aa13.51□□□□□ -0.25
RAB5B-204ENST00000548068 RAET1EQ8TD07 263 aa13.51□□□□□ -0.25
RAB5B-204ENST00000548068 POMGNT1Q8WZA1 660 aa13.51□□□□□ -0.25
RAB5B-204ENST00000548068 BORCS6Q96GS4 357 aa13.51□□□□□ -0.25
RAB5B-204ENST00000548068 ZNF830Q96NB3 372 aaPredicted RBP13.51□□□□□ -0.25
RAB5B-204ENST00000548068 CBWD1Q9BRT8 395 aa13.51□□□□□ -0.25
RAB5B-204ENST00000548068 MRPL4Q9BYD3 311 aaKnown RBP13.51□□□□□ -0.25
RAB5B-204ENST00000548068 EDEM3Q9BZQ6 932 aa13.51□□□□□ -0.25
RAB5B-204ENST00000548068 LUC7L2Q9Y383 392 aaKnown RBP13.51□□□□□ -0.25
RAB5B-204ENST00000548068 ANKRD63C9JTQ0 380 aa13.5□□□□□ -0.25
RAB5B-204ENST00000548068 HAS3O00219 553 aa13.5□□□□□ -0.25
RAB5B-204ENST00000548068 LDHAP00338 332 aaKnown RBP13.5□□□□□ -0.25
RAB5B-204ENST00000548068 PRKCBP05771 671 aa13.5□□□□□ -0.25
RAB5B-204ENST00000548068 C6orf222P0C671 652 aaPredicted RBP13.5□□□□□ -0.25
RAB5B-204ENST00000548068 SMIM10L2AP0DMW4 78 aa13.5□□□□□ -0.25
RAB5B-204ENST00000548068 SMIM10L2BP0DMW5 78 aa13.5□□□□□ -0.25
RAB5B-204ENST00000548068 GNAT1P11488 350 aa13.5□□□□□ -0.25
RAB5B-204ENST00000548068 CASP14P31944 242 aa13.5□□□□□ -0.25
RAB5B-204ENST00000548068 CLCN3P51790 818 aa13.5□□□□□ -0.25
RAB5B-204ENST00000548068 NKX3-2P78367 333 aa13.5□□□□□ -0.25
RAB5B-204ENST00000548068 CCZ1BP86790 482 aa13.5□□□□□ -0.25
RAB5B-204ENST00000548068 CCZ1P86791 482 aaPredicted RBP13.5□□□□□ -0.25
RAB5B-204ENST00000548068 CACNB2Q08289 660 aaPredicted RBP13.5□□□□□ -0.25
RAB5B-204ENST00000548068 LRMPQ12912 555 aa13.5□□□□□ -0.25
RAB5B-204ENST00000548068 BFSP1Q12934 665 aa13.5□□□□□ -0.25
RAB5B-204ENST00000548068 MKRN4PQ13434 485 aaPredicted RBP13.5□□□□□ -0.25
RAB5B-204ENST00000548068 PTPN21Q16825 1174 aa13.5□□□□□ -0.25
RAB5B-204ENST00000548068 ZNF710Q8N1W2 664 aa13.5□□□□□ -0.25
RAB5B-204ENST00000548068 GPD1LQ8N335 351 aa13.5□□□□□ -0.25
RAB5B-204ENST00000548068 TC2NQ8N9U0 490 aa13.5□□□□□ -0.25
RAB5B-204ENST00000548068 PXYLP1Q8TE99 480 aa13.5□□□□□ -0.25
RAB5B-204ENST00000548068 SLC35C1Q96A29 364 aa13.5□□□□□ -0.25
RAB5B-204ENST00000548068 LENG1Q96BZ8 264 aaPredicted RBP13.5□□□□□ -0.25
RAB5B-204ENST00000548068 CCDC113Q9H0I3 377 aa13.5□□□□□ -0.25
RAB5B-204ENST00000548068 IKZF4Q9H2S9 585 aa13.5□□□□□ -0.25
RAB5B-204ENST00000548068 PCIF1Q9H4Z3 704 aa13.5□□□□□ -0.25
RAB5B-204ENST00000548068 CAPN11Q9UMQ6 739 aa13.5□□□□□ -0.25
RAB5B-204ENST00000548068 AKT3Q9Y243 479 aa13.5□□□□□ -0.25
RAB5B-204ENST00000548068 SIK3Q9Y2K2 1263 aa13.5□□□□□ -0.25
RAB5B-204ENST00000548068 DAAM1Q9Y4D1 1078 aa13.5□□□□□ -0.25
RAB5B-204ENST00000548068 STYXL1Q9Y6J8 313 aa13.5□□□□□ -0.25
RAB5B-204ENST00000548068 ARHGAP6O43182 974 aa13.49□□□□□ -0.25
RAB5B-204ENST00000548068 SRGAP2CP0DJJ0 459 aa13.49□□□□□ -0.25
RAB5B-204ENST00000548068 PRKAR2AP13861 404 aaKnown RBP13.49□□□□□ -0.25
RAB5B-204ENST00000548068 VAMP7P51809 220 aa13.49□□□□□ -0.25
RAB5B-204ENST00000548068 ADKP55263 362 aaKnown RBP13.49□□□□□ -0.25
RAB5B-204ENST00000548068 PTENP60484 403 aa13.49□□□□□ -0.25
RAB5B-204ENST00000548068 ZBED6P86452 979 aa13.49□□□□□ -0.25
RAB5B-204ENST00000548068 CETN1Q12798 172 aa13.49□□□□□ -0.25
RAB5B-204ENST00000548068 DRP2Q13474 957 aa13.49□□□□□ -0.25
RAB5B-204ENST00000548068 ARID5BQ14865 1188 aa13.49□□□□□ -0.25
RAB5B-204ENST00000548068 SNRNP35Q16560 246 aaKnown RBP13.49□□□□□ -0.25
RAB5B-204ENST00000548068 GBP6Q6ZN66 633 aa13.49□□□□□ -0.25
RAB5B-204ENST00000548068 ZNF410Q86VK4 478 aa13.49□□□□□ -0.25
RAB5B-204ENST00000548068 IFNLR1Q8IU57 520 aaPredicted RBP13.49□□□□□ -0.25
RAB5B-204ENST00000548068 TMC2Q8TDI7 906 aa13.49□□□□□ -0.25
RAB5B-204ENST00000548068 CPLX3Q8WVH0 158 aa13.49□□□□□ -0.25
RAB5B-204ENST00000548068 KAT2BQ92831 832 aa13.49□□□□□ -0.25
RAB5B-204ENST00000548068 FBXL18Q96ME1 805 aa13.49□□□□□ -0.25
RAB5B-204ENST00000548068 NLRP4Q96MN2 994 aa13.49□□□□□ -0.25
RAB5B-204ENST00000548068 BAG1Q99933 345 aaPredicted RBP13.49□□□□□ -0.25
RAB5B-204ENST00000548068 MTG1Q9BT17 334 aaPredicted RBP13.49□□□□□ -0.25
RAB5B-204ENST00000548068 BEGAINQ9BUH8 593 aa13.49□□□□□ -0.25
RAB5B-204ENST00000548068 NUCKS1Q9H1E3 243 aaKnown RBP13.49□□□□□ -0.25
RAB5B-204ENST00000548068 MMRN2Q9H8L6 949 aa13.49□□□□□ -0.25
RAB5B-204ENST00000548068 PRMT7Q9NVM4 692 aaPredicted RBP13.49□□□□□ -0.25
RAB5B-204ENST00000548068 ZNHIT6Q9NWK9 470 aaKnown RBP13.49□□□□□ -0.25
RAB5B-204ENST00000548068 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.49□□□□□ -0.25
RAB5B-204ENST00000548068 SMIM35A0A1B0GVV1 85 aa13.48□□□□□ -0.25
RAB5B-204ENST00000548068 TTC26A0AVF1 554 aa13.48□□□□□ -0.25
RAB5B-204ENST00000548068 MBLAC1A4D2B0 266 aaPredicted RBP13.48□□□□□ -0.25
RAB5B-204ENST00000548068 TISP43B9A030 160 aa13.48□□□□□ -0.25
RAB5B-204ENST00000548068 P4HA2O15460 535 aa13.48□□□□□ -0.25
RAB5B-204ENST00000548068 CCP110O43303 1012 aa13.48□□□□□ -0.25
RAB5B-204ENST00000548068 EXTL3O43909 919 aa13.48□□□□□ -0.25
RAB5B-204ENST00000548068 ZNF500O60304 480 aaPredicted RBP13.48□□□□□ -0.25
RAB5B-204ENST00000548068 MSCO60682 206 aa13.48□□□□□ -0.25
RAB5B-204ENST00000548068 TOM1L1O75674 476 aa13.48□□□□□ -0.25
RAB5B-204ENST00000548068 ADSSP30520 456 aa13.48□□□□□ -0.25
RAB5B-204ENST00000548068 KRT9P35527 623 aa13.48□□□□□ -0.25
RAB5B-204ENST00000548068 MATR3P43243 847 aaKnown RBP eCLIP13.48□□□□□ -0.251e-7■■■□□ 16.9
RAB5B-204ENST00000548068 FXR1P51114 621 aaKnown RBP eCLIP13.48□□□□□ -0.25
RAB5B-204ENST00000548068 MCCD1P59942 119 aaPredicted RBP13.48□□□□□ -0.25
RAB5B-204ENST00000548068 PURAQ00577 322 aaKnown RBP13.48□□□□□ -0.25
RAB5B-204ENST00000548068 BEX3Q00994 111 aa13.48□□□□□ -0.25
RAB5B-204ENST00000548068 FAM187BQ17R55 369 aa13.48□□□□□ -0.25
RAB5B-204ENST00000548068 EXOC3L4Q17RC7 722 aa13.48□□□□□ -0.25
RAB5B-204ENST00000548068 GNASQ5JWF2 1037 aa13.48□□□□□ -0.25
RAB5B-204ENST00000548068 NFRKBQ6P4R8 1299 aa13.48□□□□□ -0.25
RAB5B-204ENST00000548068 SLC39A4Q6P5W5 647 aa13.48□□□□□ -0.25
RAB5B-204ENST00000548068 SLAIN1Q8ND83 568 aa13.48□□□□□ -0.25
RAB5B-204ENST00000548068 OR8K1Q8NGG5 319 aa13.48□□□□□ -0.25
RAB5B-204ENST00000548068 LMBR1Q8WVP7 490 aa13.48□□□□□ -0.25
RAB5B-204ENST00000548068 PRIMPOLQ96LW4 560 aa13.48□□□□□ -0.25
RAB5B-204ENST00000548068 SCLT1Q96NL6 688 aa13.48□□□□□ -0.25
RAB5B-204ENST00000548068 DNAJC7Q99615 494 aa13.48□□□□□ -0.25
RAB5B-204ENST00000548068 TTYH3Q9C0H2 523 aa13.48□□□□□ -0.25
RAB5B-204ENST00000548068 TMX1Q9H3N1 280 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms