RNA–Protein interactions for RNA: ENST00000548032.6

SEC23A-204, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2 BASIC

Gene SEC23A, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-204ENST00000548032 SSBP05455 408 aaKnown RBP eCLIP16.04■□□□□ 0.16
SEC23A-204ENST00000548032 ARF4P18085 180 aaPredicted RBP16.04■□□□□ 0.16
SEC23A-204ENST00000548032 SYT1P21579 422 aa16.04■□□□□ 0.16
SEC23A-204ENST00000548032 UBE3AQ05086 875 aa16.04■□□□□ 0.16
SEC23A-204ENST00000548032 HYAL1Q12794 435 aa16.04■□□□□ 0.16
SEC23A-204ENST00000548032 AMHR2Q16671 573 aa16.04■□□□□ 0.16
SEC23A-204ENST00000548032 TMEM132AQ24JP5 1023 aa16.04■□□□□ 0.16
SEC23A-204ENST00000548032 ARL6IP4Q66PJ3 421 aaKnown RBP16.04■□□□□ 0.16
SEC23A-204ENST00000548032 RBM23Q86U06 439 aaKnown RBP16.04■□□□□ 0.16
SEC23A-204ENST00000548032 CDR2LQ86X02 465 aaPredicted RBP16.04■□□□□ 0.16
SEC23A-204ENST00000548032 URGCPQ8TCY9 931 aa16.04■□□□□ 0.16
SEC23A-204ENST00000548032 PPP2R3CQ969Q6 453 aa16.04■□□□□ 0.16
SEC23A-204ENST00000548032 CCDC51Q96ER9 411 aa16.04■□□□□ 0.16
SEC23A-204ENST00000548032 INTS4Q96HW7 963 aaKnown RBP16.04■□□□□ 0.16
SEC23A-204ENST00000548032 APOL6Q9BWW8 343 aa16.04■□□□□ 0.16
SEC23A-204ENST00000548032 TRIM6Q9C030 488 aaPredicted RBP16.04■□□□□ 0.16
SEC23A-204ENST00000548032 GBP3Q9H0R5 595 aa16.04■□□□□ 0.16
SEC23A-204ENST00000548032 RSAD1Q9HA92 442 aa16.04■□□□□ 0.16
SEC23A-204ENST00000548032 TLR9Q9NR96 1032 aa16.04■□□□□ 0.16
SEC23A-204ENST00000548032 RAPGEFL1Q9UHV5 662 aa16.04■□□□□ 0.16
SEC23A-204ENST00000548032 PUF60Q9UHX1 559 aaKnown RBP16.04■□□□□ 0.16
SEC23A-204ENST00000548032 FNDC1Q4ZHG4 1894 aaPredicted RBP16.03■□□□□ 0.16
SEC23A-204ENST00000548032 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.03■□□□□ 0.16
SEC23A-204ENST00000548032 NT5C1B-RDH14C9J2C7 533 aa16.03■□□□□ 0.16
SEC23A-204ENST00000548032 H3BQ06 376 aaPredicted RBP16.03■□□□□ 0.16
SEC23A-204ENST00000548032 ZC3H11AO75152 810 aaKnown RBP eCLIP16.03■□□□□ 0.16
SEC23A-204ENST00000548032 ITGA4P13612 1032 aa16.03■□□□□ 0.16
SEC23A-204ENST00000548032 GTF2F1P35269 517 aaKnown RBP eCLIP16.03■□□□□ 0.162e-7■□□□□ 11.1
SEC23A-204ENST00000548032 PPM1AP35813 382 aa16.03■□□□□ 0.16
SEC23A-204ENST00000548032 NAMPTP43490 491 aa16.03■□□□□ 0.16
SEC23A-204ENST00000548032 ALDH7A1P49419 539 aaKnown RBP16.03■□□□□ 0.16
SEC23A-204ENST00000548032 BCAR1P56945 870 aa16.03■□□□□ 0.16
SEC23A-204ENST00000548032 KRT17Q04695 432 aa16.03■□□□□ 0.16
SEC23A-204ENST00000548032 SF3A1Q15459 793 aaKnown RBP16.03■□□□□ 0.16
SEC23A-204ENST00000548032 CDCA2Q69YH5 1023 aaPredicted RBP16.03■□□□□ 0.16
SEC23A-204ENST00000548032 AGMOQ6ZNB7 445 aa16.03■□□□□ 0.16
SEC23A-204ENST00000548032 KCNK18Q7Z418 384 aa16.03■□□□□ 0.16
SEC23A-204ENST00000548032 MRPL10Q7Z7H8 261 aaKnown RBP16.03■□□□□ 0.16
SEC23A-204ENST00000548032 ADGRD2Q7Z7M1 963 aa16.03■□□□□ 0.16
SEC23A-204ENST00000548032 SMG8Q8ND04 991 aaKnown RBP16.03■□□□□ 0.16
SEC23A-204ENST00000548032 CNNM3Q8NE01 707 aa16.03■□□□□ 0.16
SEC23A-204ENST00000548032 PABPC5Q96DU9 382 aaKnown RBP16.03■□□□□ 0.16
SEC23A-204ENST00000548032 CDK5RAP3Q96JB5 506 aa16.03■□□□□ 0.16
SEC23A-204ENST00000548032 IFT74Q96LB3 600 aa16.03■□□□□ 0.16
SEC23A-204ENST00000548032 KIFC3Q9BVG8 833 aa16.03■□□□□ 0.16
SEC23A-204ENST00000548032 CSRNP2Q9H175 543 aa16.03■□□□□ 0.16
SEC23A-204ENST00000548032 TBC1D13Q9NVG8 400 aa16.03■□□□□ 0.16
SEC23A-204ENST00000548032 PRMT7Q9NVM4 692 aaPredicted RBP16.03■□□□□ 0.16
SEC23A-204ENST00000548032 SPG21Q9NZD8 308 aa16.03■□□□□ 0.16
SEC23A-204ENST00000548032 HES2Q9Y543 173 aa16.03■□□□□ 0.16
SEC23A-204ENST00000548032 IPPQ9Y573 584 aa16.03■□□□□ 0.16
SEC23A-204ENST00000548032 KIAA1671Q9BY89 1806 aa16.03■□□□□ 0.16
SEC23A-204ENST00000548032 NPTXRO95502 500 aa16.02■□□□□ 0.16
SEC23A-204ENST00000548032 BMP15O95972 392 aa16.02■□□□□ 0.16
SEC23A-204ENST00000548032 NCLP19338 710 aaKnown RBP16.02■□□□□ 0.16
SEC23A-204ENST00000548032 NRIP1P48552 1158 aa16.02■□□□□ 0.16
SEC23A-204ENST00000548032 ERVFC1P60507 584 aa16.02■□□□□ 0.16
SEC23A-204ENST00000548032 PLCB3Q01970 1234 aa16.02■□□□□ 0.16
SEC23A-204ENST00000548032 PPP2R5AQ15172 486 aa16.02■□□□□ 0.16
SEC23A-204ENST00000548032 PLPP4Q5VZY2 271 aa16.02■□□□□ 0.16
SEC23A-204ENST00000548032 PPP4R3CPQ6ZMV5 832 aa16.02■□□□□ 0.16
SEC23A-204ENST00000548032 CABP7Q86V35 215 aa16.02■□□□□ 0.16
SEC23A-204ENST00000548032 HSCBQ8IWL3 235 aa16.02■□□□□ 0.16
SEC23A-204ENST00000548032 SLC39A11Q8N1S5 342 aa16.02■□□□□ 0.16
SEC23A-204ENST00000548032 MRPS27Q92552 414 aaKnown RBP16.02■□□□□ 0.16
SEC23A-204ENST00000548032 KIFAP3Q92845 792 aa16.02■□□□□ 0.16
SEC23A-204ENST00000548032 PNMA5Q96PV4 448 aa16.02■□□□□ 0.16
SEC23A-204ENST00000548032 TCF25Q9BQ70 676 aa16.02■□□□□ 0.16
SEC23A-204ENST00000548032 RUSC1Q9BVN2 902 aa16.02■□□□□ 0.16
SEC23A-204ENST00000548032 C1QTNF1Q9BXJ1 281 aa16.02■□□□□ 0.16
SEC23A-204ENST00000548032 C2orf40Q9H1Z8 148 aa16.02■□□□□ 0.16
SEC23A-204ENST00000548032 RNF39Q9H2S5 420 aa16.02■□□□□ 0.16
SEC23A-204ENST00000548032 ENTPD7Q9NQZ7 604 aa16.02■□□□□ 0.16
SEC23A-204ENST00000548032 USP20Q9Y2K6 914 aa16.02■□□□□ 0.16
SEC23A-204ENST00000548032 TCF20Q9UGU0 1960 aaKnown RBP16.02■□□□□ 0.15
SEC23A-204ENST00000548032 CNTNAP2Q9UHC6 1331 aa16.01■□□□□ 0.15
SEC23A-204ENST00000548032 LINC01565O15544 149 aa16.01■□□□□ 0.15
SEC23A-204ENST00000548032 NCK2O43639 380 aa16.01■□□□□ 0.15
SEC23A-204ENST00000548032 POMCP01189 267 aa16.01■□□□□ 0.15
SEC23A-204ENST00000548032 PRKCBP05771 671 aa16.01■□□□□ 0.15
SEC23A-204ENST00000548032 AFF1P51825 1210 aaKnown RBP16.01■□□□□ 0.15
SEC23A-204ENST00000548032 RESTQ13127 1097 aa16.01■□□□□ 0.15
SEC23A-204ENST00000548032 PRPF4BQ13523 1007 aaKnown RBP16.01■□□□□ 0.15
SEC23A-204ENST00000548032 CLUL1Q15846 466 aa16.01■□□□□ 0.15
SEC23A-204ENST00000548032 MAPK6Q16659 721 aa16.01■□□□□ 0.15
SEC23A-204ENST00000548032 LEXMQ3ZCV2 418 aa16.01■□□□□ 0.15
SEC23A-204ENST00000548032 FAM173BQ6P4H8 233 aa16.01■□□□□ 0.15
SEC23A-204ENST00000548032 SLC27A1Q6PCB7 646 aa16.01■□□□□ 0.15
SEC23A-204ENST00000548032 RSPH1Q8WYR4 309 aa16.01■□□□□ 0.15
SEC23A-204ENST00000548032 SNX21Q969T3 373 aa16.01■□□□□ 0.15
SEC23A-204ENST00000548032 FZD8Q9H461 694 aa16.01■□□□□ 0.15
SEC23A-204ENST00000548032 NXF3Q9H4D5 531 aaKnown RBP16.01■□□□□ 0.15
SEC23A-204ENST00000548032 NRDE2Q9H7Z3 1164 aa16.01■□□□□ 0.15
SEC23A-204ENST00000548032 TLE6Q9H808 572 aa16.01■□□□□ 0.15
SEC23A-204ENST00000548032 UBN1Q9NPG3 1134 aa16.01■□□□□ 0.15
SEC23A-204ENST00000548032 LZTS1Q9Y250 596 aa16.01■□□□□ 0.15
SEC23A-204ENST00000548032 BRWD1Q9NSI6 2320 aa16■□□□□ 0.15
SEC23A-204ENST00000548032 A0A1B0GUA9 196 aa16■□□□□ 0.15
SEC23A-204ENST00000548032 CCDC169A6NNP5 214 aa16■□□□□ 0.15
SEC23A-204ENST00000548032 PER2O15055 1255 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms