RNA–Protein interactions for RNA: ENST00000547878.6

TMEM116-205, Transcript of transmembrane protein 116, humanhuman

TSL 2

Gene TMEM116, Length 1,716 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-205ENST00000547878 SLC39A2Q9NP94 309 aa9.43□□□□□ -0.9
TMEM116-205ENST00000547878 LUC7LQ9NQ29 371 aaKnown RBP9.43□□□□□ -0.9
TMEM116-205ENST00000547878 DDX4Q9NQI0 724 aaKnown RBP9.43□□□□□ -0.9
TMEM116-205ENST00000547878 TMOD4Q9NZQ9 345 aa9.43□□□□□ -0.9
TMEM116-205ENST00000547878 DUSP10Q9Y6W6 482 aa9.43□□□□□ -0.9
TMEM116-205ENST00000547878 FAM169AQ9Y6X4 670 aa9.43□□□□□ -0.9
TMEM116-205ENST00000547878 PNMA6FA0A0J9YX94 578 aa9.42□□□□□ -0.9
TMEM116-205ENST00000547878 MYH7BA7E2Y1 1941 aa9.42□□□□□ -0.9
TMEM116-205ENST00000547878 AGPSO00116 658 aa9.42□□□□□ -0.9
TMEM116-205ENST00000547878 NKRFO15226 690 aaKnown RBP eCLIP9.42□□□□□ -0.9
TMEM116-205ENST00000547878 ZNF185O15231 689 aa9.42□□□□□ -0.9
TMEM116-205ENST00000547878 AKR1B10O60218 316 aa9.42□□□□□ -0.9
TMEM116-205ENST00000547878 CTNND1O60716 968 aaKnown RBP9.42□□□□□ -0.9
TMEM116-205ENST00000547878 PLEKP08567 350 aaPredicted RBP9.42□□□□□ -0.9
TMEM116-205ENST00000547878 EIF4A3P38919 411 aaKnown RBP9.42□□□□□ -0.9
TMEM116-205ENST00000547878 TXKP42681 527 aa9.42□□□□□ -0.9
TMEM116-205ENST00000547878 LIG3P49916 1009 aa9.42□□□□□ -0.9
TMEM116-205ENST00000547878 ATN1P54259 1190 aaPredicted RBP9.42□□□□□ -0.9
TMEM116-205ENST00000547878 EPHB4P54760 987 aa9.42□□□□□ -0.9
TMEM116-205ENST00000547878 DRP2Q13474 957 aa9.42□□□□□ -0.9
TMEM116-205ENST00000547878 PUS10Q3MIT2 529 aaKnown RBP9.42□□□□□ -0.9
TMEM116-205ENST00000547878 MFSD4BQ5TF39 518 aa9.42□□□□□ -0.9
TMEM116-205ENST00000547878 MTHFD1LQ6UB35 978 aa9.42□□□□□ -0.9
TMEM116-205ENST00000547878 CCDC80Q76M96 950 aa9.42□□□□□ -0.9
TMEM116-205ENST00000547878 IQCF2Q8IXL9 164 aa9.42□□□□□ -0.9
TMEM116-205ENST00000547878 MYOCDQ8IZQ8 938 aa9.42□□□□□ -0.9
TMEM116-205ENST00000547878 SNX29Q8TEQ0 813 aa9.42□□□□□ -0.9
TMEM116-205ENST00000547878 DDX12PQ92771 950 aa9.42□□□□□ -0.9
TMEM116-205ENST00000547878 ZBTB10Q96DT7 871 aa9.42□□□□□ -0.9
TMEM116-205ENST00000547878 MTMR8Q96EF0 704 aa9.42□□□□□ -0.9
TMEM116-205ENST00000547878 RSRC1Q96IZ7 334 aaKnown RBP9.42□□□□□ -0.9
TMEM116-205ENST00000547878 NOX5Q96PH1 765 aa9.42□□□□□ -0.9
TMEM116-205ENST00000547878 PAGR1Q9BTK6 254 aa9.42□□□□□ -0.9
TMEM116-205ENST00000547878 SENP6Q9GZR1 1112 aaPredicted RBP9.42□□□□□ -0.9
TMEM116-205ENST00000547878 TXNRD2Q9NNW7 524 aa9.42□□□□□ -0.9
TMEM116-205ENST00000547878 FAM207AQ9NSI2 230 aaPredicted RBP9.42□□□□□ -0.9
TMEM116-205ENST00000547878 STIM2Q9P246 746 aa9.42□□□□□ -0.9
TMEM116-205ENST00000547878 SAP30BPQ9UHR5 308 aaKnown RBP9.42□□□□□ -0.9
TMEM116-205ENST00000547878 PNMA3Q9UL41 463 aa9.42□□□□□ -0.9
TMEM116-205ENST00000547878 CORO1CQ9ULV4 474 aaPredicted RBP9.42□□□□□ -0.9
TMEM116-205ENST00000547878 COL4A3BPQ9Y5P4 624 aa9.42□□□□□ -0.9
TMEM116-205ENST00000547878 FRMD3A2A2Y4 597 aa9.42□□□□□ -0.9
TMEM116-205ENST00000547878 GRID2IPA4D2P6 1211 aa9.42□□□□□ -0.9
TMEM116-205ENST00000547878 POTEMA6NI47 508 aa9.42□□□□□ -0.9
TMEM116-205ENST00000547878 USP17L5A8MUK1 530 aa9.42□□□□□ -0.9
TMEM116-205ENST00000547878 BTNL10A8MVZ5 291 aa9.42□□□□□ -0.9
TMEM116-205ENST00000547878 GOLGA8KD6RF30 607 aa9.42□□□□□ -0.9
TMEM116-205ENST00000547878 F8VZ95 297 aa9.42□□□□□ -0.9
TMEM116-205ENST00000547878 CES2O00748 559 aa9.42□□□□□ -0.9
TMEM116-205ENST00000547878 TDP2O95551 362 aa9.42□□□□□ -0.9
TMEM116-205ENST00000547878 SERPING1P05155 500 aa9.42□□□□□ -0.9
TMEM116-205ENST00000547878 ANXA13P27216 316 aa9.42□□□□□ -0.9
TMEM116-205ENST00000547878 GGCXP38435 758 aa9.42□□□□□ -0.9
TMEM116-205ENST00000547878 HMGCS2P54868 508 aa9.42□□□□□ -0.9
TMEM116-205ENST00000547878 C2orf54Q08AI8 447 aa9.42□□□□□ -0.9
TMEM116-205ENST00000547878 ZNF543Q08ER8 600 aa9.42□□□□□ -0.9
TMEM116-205ENST00000547878 COASYQ13057 564 aa9.42□□□□□ -0.9
TMEM116-205ENST00000547878 SPP2Q13103 211 aa9.42□□□□□ -0.9
TMEM116-205ENST00000547878 RRP1BQ14684 758 aaKnown RBP9.42□□□□□ -0.9
TMEM116-205ENST00000547878 TJAP1Q5JTD0 557 aa9.42□□□□□ -0.9
TMEM116-205ENST00000547878 GPATCH4Q5T3I0 446 aaKnown RBP9.42□□□□□ -0.9
TMEM116-205ENST00000547878 GJC2Q5T442 439 aaPredicted RBP9.42□□□□□ -0.9
TMEM116-205ENST00000547878 HAUS3Q68CZ6 603 aa9.42□□□□□ -0.9
TMEM116-205ENST00000547878 MOXD1Q6UVY6 613 aa9.42□□□□□ -0.9
TMEM116-205ENST00000547878 GET4Q7L5D6 327 aaPredicted RBP9.42□□□□□ -0.9
TMEM116-205ENST00000547878 TRIM59Q8IWR1 403 aa9.42□□□□□ -0.9
TMEM116-205ENST00000547878 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.42□□□□□ -0.9
TMEM116-205ENST00000547878 HPS3Q969F9 1004 aa9.42□□□□□ -0.9
TMEM116-205ENST00000547878 TLR10Q9BXR5 811 aa9.42□□□□□ -0.9
TMEM116-205ENST00000547878 IDI2Q9BXS1 227 aa9.42□□□□□ -0.9
TMEM116-205ENST00000547878 CPVLQ9H3G5 476 aa9.42□□□□□ -0.9
TMEM116-205ENST00000547878 MORF4L1Q9UBU8 362 aa9.42□□□□□ -0.9
TMEM116-205ENST00000547878 ITGB1BP2Q9UKP3 347 aa9.42□□□□□ -0.9
TMEM116-205ENST00000547878 WDR37Q9Y2I8 494 aa9.42□□□□□ -0.9
TMEM116-205ENST00000547878 PCDHGC5Q9Y5F6 944 aa9.42□□□□□ -0.9
TMEM116-205ENST00000547878 REV3LO60673 3130 aa9.41□□□□□ -0.9
TMEM116-205ENST00000547878 TMEM265A0A087WTH1 108 aa9.41□□□□□ -0.9
TMEM116-205ENST00000547878 SPDYE3A6NKU9 549 aa9.41□□□□□ -0.9
TMEM116-205ENST00000547878 ENTPD3O75355 529 aa9.41□□□□□ -0.9
TMEM116-205ENST00000547878 TTLL1O95922 423 aa9.41□□□□□ -0.9
TMEM116-205ENST00000547878 HARSP12081 509 aaKnown RBP9.41□□□□□ -0.9
TMEM116-205ENST00000547878 MAGEA1P43355 309 aa9.41□□□□□ -0.9
TMEM116-205ENST00000547878 APBA1Q02410 837 aa9.41□□□□□ -0.9
TMEM116-205ENST00000547878 PPFIA1Q13136 1202 aa9.41□□□□□ -0.9
TMEM116-205ENST00000547878 EDRF1Q3B7T1 1238 aa9.41□□□□□ -0.9
TMEM116-205ENST00000547878 FAM26FQ5R3K3 315 aa9.41□□□□□ -0.9
TMEM116-205ENST00000547878 SFMBT2Q5VUG0 894 aa9.41□□□□□ -0.9
TMEM116-205ENST00000547878 ALS2CLQ60I27 953 aa9.41□□□□□ -0.9
TMEM116-205ENST00000547878 POTEEQ6S8J3 1075 aa9.41□□□□□ -0.9
TMEM116-205ENST00000547878 B4GALNT4Q76KP1 1039 aa9.41□□□□□ -0.9
TMEM116-205ENST00000547878 RRAGAQ7L523 313 aa9.41□□□□□ -0.9
TMEM116-205ENST00000547878 MREGQ8N565 214 aa9.41□□□□□ -0.9
TMEM116-205ENST00000547878 EIF1ADQ8N9N8 165 aaKnown RBP9.41□□□□□ -0.9
TMEM116-205ENST00000547878 C1orf131Q8NDD1 294 aaKnown RBP9.41□□□□□ -0.9
TMEM116-205ENST00000547878 FAM76AQ8TAV0 307 aa9.41□□□□□ -0.9
TMEM116-205ENST00000547878 LMBR1Q8WVP7 490 aa9.41□□□□□ -0.9
TMEM116-205ENST00000547878 USP6NLQ92738 828 aa9.41□□□□□ -0.9
TMEM116-205ENST00000547878 CUL5Q93034 780 aa9.41□□□□□ -0.9
TMEM116-205ENST00000547878 SPDL1Q96EA4 605 aa9.41□□□□□ -0.9
TMEM116-205ENST00000547878 EEF2KMTQ96G04 330 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms