RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 PTENP60484 403 aa14.87□□□□□ -0.03
CPSF6-204ENST00000547486 SMC1AQ14683 1233 aaKnown RBP14.87□□□□□ -0.03
CPSF6-204ENST00000547486 CBX2Q14781 532 aaPredicted RBP14.87□□□□□ -0.03
CPSF6-204ENST00000547486 HERC4Q5GLZ8 1057 aaPredicted RBP14.87□□□□□ -0.03
CPSF6-204ENST00000547486 VPS52Q8N1B4 723 aa14.87□□□□□ -0.03
CPSF6-204ENST00000547486 SMG8Q8ND04 991 aaKnown RBP14.87□□□□□ -0.03
CPSF6-204ENST00000547486 PGBD4Q96DM1 585 aa14.87□□□□□ -0.03
CPSF6-204ENST00000547486 IGSF21Q96ID5 467 aa14.87□□□□□ -0.03
CPSF6-204ENST00000547486 PHF7Q9BWX1 381 aaPredicted RBP14.87□□□□□ -0.03
CPSF6-204ENST00000547486 VN1R3Q9BXE9 311 aa14.87□□□□□ -0.03
CPSF6-204ENST00000547486 EIF2AQ9BY44 585 aaKnown RBP14.87□□□□□ -0.03
CPSF6-204ENST00000547486 GBP3Q9H0R5 595 aa14.87□□□□□ -0.03
CPSF6-204ENST00000547486 RNF39Q9H2S5 420 aa14.87□□□□□ -0.03
CPSF6-204ENST00000547486 CDH22Q9UJ99 828 aa14.87□□□□□ -0.03
CPSF6-204ENST00000547486 FSD2A1L4K1 749 aa14.86□□□□□ -0.03
CPSF6-204ENST00000547486 TSPAN1O60635 241 aa14.86□□□□□ -0.03
CPSF6-204ENST00000547486 PLA2G5P39877 138 aa14.86□□□□□ -0.03
CPSF6-204ENST00000547486 RNASELQ05823 741 aaKnown RBP14.86□□□□□ -0.03
CPSF6-204ENST00000547486 CAPSQ13938 189 aa14.86□□□□□ -0.03
CPSF6-204ENST00000547486 MXD4Q14582 209 aaPredicted RBP14.86□□□□□ -0.03
CPSF6-204ENST00000547486 DDX53Q86TM3 631 aaKnown RBP14.86□□□□□ -0.03
CPSF6-204ENST00000547486 TMEM169Q96HH4 297 aa14.86□□□□□ -0.03
CPSF6-204ENST00000547486 RPGRIP1Q96KN7 1286 aa14.86□□□□□ -0.03
CPSF6-204ENST00000547486 ZBP1Q9H171 429 aa14.86□□□□□ -0.03
CPSF6-204ENST00000547486 HCFC2Q9Y5Z7 792 aa14.86□□□□□ -0.03
CPSF6-204ENST00000547486 TRIOO75962 3097 aa14.85□□□□□ -0.03
CPSF6-204ENST00000547486 MED24O75448 989 aa14.85□□□□□ -0.03
CPSF6-204ENST00000547486 DGAT1O75907 488 aa14.85□□□□□ -0.03
CPSF6-204ENST00000547486 POMCP01189 267 aa14.85□□□□□ -0.03
CPSF6-204ENST00000547486 XRCC6P12956 609 aaKnown RBP eCLIP14.85□□□□□ -0.03
CPSF6-204ENST00000547486 NCLP19338 710 aaKnown RBP14.85□□□□□ -0.03
CPSF6-204ENST00000547486 GLRA2P23416 452 aa14.85□□□□□ -0.03
CPSF6-204ENST00000547486 MBTD1Q05BQ5 628 aa14.85□□□□□ -0.03
CPSF6-204ENST00000547486 POU5F1BQ06416 359 aa14.85□□□□□ -0.03
CPSF6-204ENST00000547486 ZNF174Q15697 407 aa14.85□□□□□ -0.03
CPSF6-204ENST00000547486 AMHR2Q16671 573 aa14.85□□□□□ -0.03
CPSF6-204ENST00000547486 KANK3Q6NY19 840 aa14.85□□□□□ -0.03
CPSF6-204ENST00000547486 CATSPER3Q86XQ3 398 aa14.85□□□□□ -0.03
CPSF6-204ENST00000547486 IFNLR1Q8IU57 520 aaPredicted RBP14.85□□□□□ -0.03
CPSF6-204ENST00000547486 RSPH1Q8WYR4 309 aa14.85□□□□□ -0.03
CPSF6-204ENST00000547486 FAM122AQ96E09 287 aa14.85□□□□□ -0.03
CPSF6-204ENST00000547486 CPB2Q96IY4 423 aa14.85□□□□□ -0.03
CPSF6-204ENST00000547486 C8orf76Q96K31 380 aa14.85□□□□□ -0.03
CPSF6-204ENST00000547486 LLPHQ9BRT6 129 aaKnown RBP14.85□□□□□ -0.03
CPSF6-204ENST00000547486 RSAD1Q9HA92 442 aa14.85□□□□□ -0.03
CPSF6-204ENST00000547486 GPRC5CQ9NQ84 441 aa14.85□□□□□ -0.03
CPSF6-204ENST00000547486 HCN4Q9Y3Q4 1203 aa14.85□□□□□ -0.03
CPSF6-204ENST00000547486 ARIH1Q9Y4X5 557 aaPredicted RBP14.85□□□□□ -0.03
CPSF6-204ENST00000547486 HES2Q9Y543 173 aa14.85□□□□□ -0.03
CPSF6-204ENST00000547486 IPPQ9Y573 584 aa14.85□□□□□ -0.03
CPSF6-204ENST00000547486 INO80B-WBP1J3KQ70 363 aa14.84□□□□□ -0.03
CPSF6-204ENST00000547486 ERLIN2O94905 339 aa14.84□□□□□ -0.03
CPSF6-204ENST00000547486 ALDH2P05091 517 aa14.84□□□□□ -0.03
CPSF6-204ENST00000547486 SRGAP2BP0DMP2 458 aa14.84□□□□□ -0.03
CPSF6-204ENST00000547486 CTSAP10619 480 aa14.84□□□□□ -0.03
CPSF6-204ENST00000547486 HOXB8P17481 243 aaPredicted RBP14.84□□□□□ -0.03
CPSF6-204ENST00000547486 CA8P35219 290 aa14.84□□□□□ -0.03
CPSF6-204ENST00000547486 SAFBQ15424 915 aaKnown RBP eCLIP14.84□□□□□ -0.03
CPSF6-204ENST00000547486 C8orf34Q49A92 452 aa14.84□□□□□ -0.03
CPSF6-204ENST00000547486 HFE2Q6ZVN8 426 aa14.84□□□□□ -0.03
CPSF6-204ENST00000547486 MAEAQ7L5Y9 396 aa14.84□□□□□ -0.03
CPSF6-204ENST00000547486 FBXO18Q8NFZ0 1043 aa14.84□□□□□ -0.03
CPSF6-204ENST00000547486 FEZF2Q8TBJ5 459 aa14.84□□□□□ -0.03
CPSF6-204ENST00000547486 URGCPQ8TCY9 931 aa14.84□□□□□ -0.03
CPSF6-204ENST00000547486 EDAQ92838 391 aa14.84□□□□□ -0.03
CPSF6-204ENST00000547486 CASP10Q92851 521 aa14.84□□□□□ -0.03
CPSF6-204ENST00000547486 MIOSQ9NXC5 875 aa14.84□□□□□ -0.03
CPSF6-204ENST00000547486 IRAK3Q9Y616 596 aa14.84□□□□□ -0.03
CPSF6-204ENST00000547486 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.83□□□□□ -0.04
CPSF6-204ENST00000547486 NRP1O14786 923 aa14.83□□□□□ -0.04
CPSF6-204ENST00000547486 B4GALT5O43286 388 aa14.83□□□□□ -0.04
CPSF6-204ENST00000547486 USO1O60763 962 aaKnown RBP14.83□□□□□ -0.04
CPSF6-204ENST00000547486 WEE2P0C1S8 567 aa14.83□□□□□ -0.04
CPSF6-204ENST00000547486 ITGA4P13612 1032 aa14.83□□□□□ -0.04
CPSF6-204ENST00000547486 EPCAMP16422 314 aa14.83□□□□□ -0.04
CPSF6-204ENST00000547486 ARF4P18085 180 aaPredicted RBP14.83□□□□□ -0.04
CPSF6-204ENST00000547486 TFDP1Q14186 410 aa14.83□□□□□ -0.04
CPSF6-204ENST00000547486 CDR2LQ86X02 465 aaPredicted RBP14.83□□□□□ -0.04
CPSF6-204ENST00000547486 C12orf76Q8N812 135 aaPredicted RBP14.83□□□□□ -0.04
CPSF6-204ENST00000547486 C4orf32Q8N8J7 132 aa14.83□□□□□ -0.04
CPSF6-204ENST00000547486 SLC22A17Q8WUG5 538 aa14.83□□□□□ -0.04
CPSF6-204ENST00000547486 ZSCAN31Q96LW9 406 aaPredicted RBP14.83□□□□□ -0.04
CPSF6-204ENST00000547486 GAD1Q99259 594 aa14.83□□□□□ -0.04
CPSF6-204ENST00000547486 NFKBIZQ9BYH8 718 aa14.83□□□□□ -0.04
CPSF6-204ENST00000547486 CSRNP2Q9H175 543 aa14.83□□□□□ -0.04
CPSF6-204ENST00000547486 POLR3FQ9H1D9 316 aaPredicted RBP14.83□□□□□ -0.04
CPSF6-204ENST00000547486 ADAM7Q9H2U9 754 aa14.83□□□□□ -0.04
CPSF6-204ENST00000547486 FOXP1Q9H334 677 aaPredicted RBP14.83□□□□□ -0.04
CPSF6-204ENST00000547486 KANSL3Q9P2N6 904 aa14.83□□□□□ -0.04
CPSF6-204ENST00000547486 FAN1Q9Y2M0 1017 aa14.83□□□□□ -0.04
CPSF6-204ENST00000547486 CNTNAP2Q9UHC6 1331 aa14.83□□□□□ -0.04
CPSF6-204ENST00000547486 ARL5CA6NH57 179 aa14.82□□□□□ -0.04
CPSF6-204ENST00000547486 AXLP30530 894 aa14.82□□□□□ -0.04
CPSF6-204ENST00000547486 NBR1Q14596 966 aa14.82□□□□□ -0.04
CPSF6-204ENST00000547486 PCBP1Q15365 356 aaKnown RBP eCLIP14.82□□□□□ -0.04
CPSF6-204ENST00000547486 PTPN14Q15678 1187 aa14.82□□□□□ -0.04
CPSF6-204ENST00000547486 NOTUMQ6P988 496 aa14.82□□□□□ -0.04
CPSF6-204ENST00000547486 TAS1R1Q7RTX1 841 aa14.82□□□□□ -0.04
CPSF6-204ENST00000547486 COLGALT2Q8IYK4 626 aa14.82□□□□□ -0.04
CPSF6-204ENST00000547486 CNNM3Q8NE01 707 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms