RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 GM2AP17900 193 aa11.5□□□□□ -0.57
NPAS3-205ENST00000547068 ANXA13P27216 316 aa11.5□□□□□ -0.57
NPAS3-205ENST00000547068 ATP5DP30049 168 aa11.5□□□□□ -0.57
NPAS3-205ENST00000547068 STX2P32856 288 aa11.5□□□□□ -0.57
NPAS3-205ENST00000547068 PRKCIP41743 596 aa11.5□□□□□ -0.57
NPAS3-205ENST00000547068 RANBP1P43487 201 aa11.5□□□□□ -0.57
NPAS3-205ENST00000547068 GALCP54803 685 aa11.5□□□□□ -0.57
NPAS3-205ENST00000547068 ACVR2BQ13705 512 aa11.5□□□□□ -0.57
NPAS3-205ENST00000547068 SETDB1Q15047 1291 aa11.5□□□□□ -0.57
NPAS3-205ENST00000547068 TMEM266Q2M3C6 531 aa11.5□□□□□ -0.57
NPAS3-205ENST00000547068 ENDOVQ8N8Q3 282 aaKnown RBP11.5□□□□□ -0.57
NPAS3-205ENST00000547068 SLC35G2Q8TBE7 412 aa11.5□□□□□ -0.57
NPAS3-205ENST00000547068 TBCKQ8TEA7 893 aa11.5□□□□□ -0.57
NPAS3-205ENST00000547068 KIFAP3Q92845 792 aa11.5□□□□□ -0.57
NPAS3-205ENST00000547068 RUNDC3BQ96NL0 473 aa11.5□□□□□ -0.57
NPAS3-205ENST00000547068 TMEM237Q96Q45 408 aa11.5□□□□□ -0.57
NPAS3-205ENST00000547068 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.5□□□□□ -0.57
NPAS3-205ENST00000547068 PIM2Q9P1W9 311 aa11.5□□□□□ -0.57
NPAS3-205ENST00000547068 CTNNAL1Q9UBT7 734 aa11.5□□□□□ -0.57
NPAS3-205ENST00000547068 ARMCX3Q9UH62 379 aaPredicted RBP11.5□□□□□ -0.57
NPAS3-205ENST00000547068 MAD2L2Q9UI95 211 aa11.5□□□□□ -0.57
NPAS3-205ENST00000547068 NENFQ9UMX5 172 aa11.5□□□□□ -0.57
NPAS3-205ENST00000547068 ATP8B3O60423 1300 aa11.5□□□□□ -0.57
NPAS3-205ENST00000547068 DDX3XO00571 662 aaKnown RBP eCLIP11.5□□□□□ -0.57
NPAS3-205ENST00000547068 GH1P01241 217 aa11.5□□□□□ -0.57
NPAS3-205ENST00000547068 PLCG2P16885 1265 aa11.5□□□□□ -0.57
NPAS3-205ENST00000547068 GRM4Q14833 912 aa11.5□□□□□ -0.57
NPAS3-205ENST00000547068 CALCRLQ16602 461 aa11.5□□□□□ -0.57
NPAS3-205ENST00000547068 SLC35G1Q2M3R5 365 aa11.5□□□□□ -0.57
NPAS3-205ENST00000547068 CGB2Q6NT52 195 aa11.5□□□□□ -0.57
NPAS3-205ENST00000547068 KCNK18Q7Z418 384 aa11.5□□□□□ -0.57
NPAS3-205ENST00000547068 CCDC25Q86WR0 208 aa11.5□□□□□ -0.57
NPAS3-205ENST00000547068 RBBP8NLQ8NC74 664 aaPredicted RBP11.5□□□□□ -0.57
NPAS3-205ENST00000547068 SNX29Q8TEQ0 813 aa11.5□□□□□ -0.57
NPAS3-205ENST00000547068 FGD4Q96M96 766 aa11.5□□□□□ -0.57
NPAS3-205ENST00000547068 MYLK2Q9H1R3 596 aa11.5□□□□□ -0.57
NPAS3-205ENST00000547068 HDAC9Q9UKV0 1011 aa11.5□□□□□ -0.57
NPAS3-205ENST00000547068 SMCO2A6NFE2 343 aa11.49□□□□□ -0.57
NPAS3-205ENST00000547068 POTEMA6NI47 508 aa11.49□□□□□ -0.57
NPAS3-205ENST00000547068 PODXLO00592 558 aa11.49□□□□□ -0.57
NPAS3-205ENST00000547068 TARSP26639 723 aaKnown RBP11.49□□□□□ -0.57
NPAS3-205ENST00000547068 PTGIRP43119 386 aa11.49□□□□□ -0.57
NPAS3-205ENST00000547068 UBE4AQ14139 1066 aa11.49□□□□□ -0.57
NPAS3-205ENST00000547068 MTFR1Q15390 333 aa11.49□□□□□ -0.57
NPAS3-205ENST00000547068 CLUL1Q15846 466 aa11.49□□□□□ -0.57
NPAS3-205ENST00000547068 EXOC3L4Q17RC7 722 aa11.49□□□□□ -0.57
NPAS3-205ENST00000547068 LRRC23Q53EV4 343 aaPredicted RBP11.49□□□□□ -0.57
NPAS3-205ENST00000547068 KRT79Q5XKE5 535 aa11.49□□□□□ -0.57
NPAS3-205ENST00000547068 OR52E8Q6IFG1 317 aa11.49□□□□□ -0.57
NPAS3-205ENST00000547068 IRGCQ6NXR0 463 aa11.49□□□□□ -0.57
NPAS3-205ENST00000547068 GRAMD1AQ96CP6 724 aa11.49□□□□□ -0.57
NPAS3-205ENST00000547068 ERP27Q96DN0 273 aa11.49□□□□□ -0.57
NPAS3-205ENST00000547068 BICD1Q96G01 975 aa11.49□□□□□ -0.57
NPAS3-205ENST00000547068 FGFBP2Q9BYJ0 223 aa11.49□□□□□ -0.57
NPAS3-205ENST00000547068 RAB34Q9BZG1 259 aa11.49□□□□□ -0.57
NPAS3-205ENST00000547068 TAOK3Q9H2K8 898 aa11.49□□□□□ -0.57
NPAS3-205ENST00000547068 USP40Q9NVE5 1235 aa11.49□□□□□ -0.57
NPAS3-205ENST00000547068 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.49□□□□□ -0.57
NPAS3-205ENST00000547068 SCOCQ9UIL1 159 aa11.49□□□□□ -0.57
NPAS3-205ENST00000547068 HAO1Q9UJM8 370 aa11.49□□□□□ -0.57
NPAS3-205ENST00000547068 ZBTB12Q9Y330 459 aaPredicted RBP11.49□□□□□ -0.57
NPAS3-205ENST00000547068 KIF13BQ9NQT8 1826 aa11.49□□□□□ -0.57
NPAS3-205ENST00000547068 PHF2O75151 1096 aa11.49□□□□□ -0.57
NPAS3-205ENST00000547068 CYP2D6P10635 497 aa11.49□□□□□ -0.57
NPAS3-205ENST00000547068 PON1P27169 355 aa11.49□□□□□ -0.57
NPAS3-205ENST00000547068 CHRNA3P32297 505 aa11.49□□□□□ -0.57
NPAS3-205ENST00000547068 FXR2P51116 673 aaKnown RBP eCLIP11.49□□□□□ -0.57
NPAS3-205ENST00000547068 DPY19L2P1Q6NXN4 242 aa11.49□□□□□ -0.57
NPAS3-205ENST00000547068 SUPT20HQ8NEM7 779 aa11.49□□□□□ -0.57
NPAS3-205ENST00000547068 FAM81AQ8TBF8 368 aa11.49□□□□□ -0.57
NPAS3-205ENST00000547068 DNAJC19Q96DA6 116 aa11.49□□□□□ -0.57
NPAS3-205ENST00000547068 RBM41Q96IZ5 413 aaKnown RBP11.49□□□□□ -0.57
NPAS3-205ENST00000547068 SERPINB12Q96P63 405 aa11.49□□□□□ -0.57
NPAS3-205ENST00000547068 TRAPPC9Q96Q05 1148 aa11.49□□□□□ -0.57
NPAS3-205ENST00000547068 NUDT12Q9BQG2 462 aa11.49□□□□□ -0.57
NPAS3-205ENST00000547068 C6orf50Q9HD87 102 aa11.49□□□□□ -0.57
NPAS3-205ENST00000547068 CTTNBP2NLQ9P2B4 639 aa11.49□□□□□ -0.57
NPAS3-205ENST00000547068 PFASO15067 1338 aa11.49□□□□□ -0.57
NPAS3-205ENST00000547068 PITPNM2Q9BZ72 1349 aa11.49□□□□□ -0.57
NPAS3-205ENST00000547068 LRP5O75197 1615 aa11.49□□□□□ -0.57
NPAS3-205ENST00000547068 COL11A2P13942 1736 aaPredicted RBP11.48□□□□□ -0.57
NPAS3-205ENST00000547068 CETN3O15182 167 aa11.48□□□□□ -0.57
NPAS3-205ENST00000547068 BRAFP15056 766 aa11.48□□□□□ -0.57
NPAS3-205ENST00000547068 GNA11P29992 359 aa11.48□□□□□ -0.57
NPAS3-205ENST00000547068 TFAP4Q01664 338 aa11.48□□□□□ -0.57
NPAS3-205ENST00000547068 LMNB2Q03252 620 aa11.48□□□□□ -0.57
NPAS3-205ENST00000547068 DYNC1I2Q13409 638 aaKnown RBP11.48□□□□□ -0.57
NPAS3-205ENST00000547068 WASHC2DQ5SRD0 308 aa11.48□□□□□ -0.57
NPAS3-205ENST00000547068 CC2D2BQ6DHV5 1058 aa11.48□□□□□ -0.57
NPAS3-205ENST00000547068 DGKHQ86XP1 1220 aa11.48□□□□□ -0.57
NPAS3-205ENST00000547068 TTC8Q8TAM2 541 aa11.48□□□□□ -0.57
NPAS3-205ENST00000547068 UCMAQ8WVF2 138 aa11.48□□□□□ -0.57
NPAS3-205ENST00000547068 RFFLQ8WZ73 363 aa11.48□□□□□ -0.57
NPAS3-205ENST00000547068 INPP5DQ92835 1189 aa11.48□□□□□ -0.57
NPAS3-205ENST00000547068 FAM136AQ96C01 138 aa11.48□□□□□ -0.57
NPAS3-205ENST00000547068 MAGEB18Q96M61 343 aa11.48□□□□□ -0.57
NPAS3-205ENST00000547068 MTMR9Q96QG7 549 aa11.48□□□□□ -0.57
NPAS3-205ENST00000547068 PITPNM3Q9BZ71 974 aa11.48□□□□□ -0.57
NPAS3-205ENST00000547068 DCP1AQ9NPI6 582 aaPredicted RBP11.48□□□□□ -0.57
NPAS3-205ENST00000547068 BMP2KQ9NSY1 1161 aaPredicted RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms