RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 CYP26A1O43174 497 aa15.78■□□□□ 0.12
HOXC11-202ENST00000546378 THAP12O43422 761 aa15.78■□□□□ 0.12
HOXC11-202ENST00000546378 PCK1P35558 622 aa15.78■□□□□ 0.12
HOXC11-202ENST00000546378 CUL1Q13616 776 aa15.78■□□□□ 0.12
HOXC11-202ENST00000546378 FIGNQ5HY92 759 aa15.78■□□□□ 0.12
HOXC11-202ENST00000546378 HOOK3Q86VS8 718 aa15.78■□□□□ 0.12
HOXC11-202ENST00000546378 OGFOD1Q8N543 542 aa15.78■□□□□ 0.12
HOXC11-202ENST00000546378 GANQ9H2C0 597 aa15.78■□□□□ 0.12
HOXC11-202ENST00000546378 KIF9Q9HAQ2 790 aa15.78■□□□□ 0.12
HOXC11-202ENST00000546378 ZNF831Q5JPB2 1677 aa15.77■□□□□ 0.12
HOXC11-202ENST00000546378 KAT6AQ92794 2004 aa15.77■□□□□ 0.12
HOXC11-202ENST00000546378 A0A1B0GUA9 196 aa15.77■□□□□ 0.12
HOXC11-202ENST00000546378 CCDC169A6NNP5 214 aa15.77■□□□□ 0.12
HOXC11-202ENST00000546378 PRLRP16471 622 aa15.77■□□□□ 0.12
HOXC11-202ENST00000546378 COMTP21964 271 aa15.77■□□□□ 0.12
HOXC11-202ENST00000546378 ZNF131P52739 623 aa15.77■□□□□ 0.12
HOXC11-202ENST00000546378 SOX10P56693 466 aa15.77■□□□□ 0.12
HOXC11-202ENST00000546378 ELF3P78545 371 aaPredicted RBP15.77■□□□□ 0.12
HOXC11-202ENST00000546378 SBK1Q52WX2 424 aa15.77■□□□□ 0.12
HOXC11-202ENST00000546378 KIAA1755Q5JYT7 1200 aa15.77■□□□□ 0.12
HOXC11-202ENST00000546378 SEL1L2Q5TEA6 688 aa15.77■□□□□ 0.12
HOXC11-202ENST00000546378 APOBEC3HQ6NTF7 200 aaKnown RBP15.77■□□□□ 0.12
HOXC11-202ENST00000546378 NT5DC3Q86UY8 548 aa15.77■□□□□ 0.12
HOXC11-202ENST00000546378 NEDD1Q8NHV4 660 aa15.77■□□□□ 0.12
HOXC11-202ENST00000546378 ETNK1Q9HBU6 452 aa15.77■□□□□ 0.12
HOXC11-202ENST00000546378 METTL5Q9NRN9 209 aaKnown RBP15.77■□□□□ 0.12
HOXC11-202ENST00000546378 MTRF1LQ9UGC7 380 aaKnown RBP15.77■□□□□ 0.12
HOXC11-202ENST00000546378 GJA3Q9Y6H8 435 aa15.77■□□□□ 0.12
HOXC11-202ENST00000546378 YDJCA8MPS7 323 aa15.77■□□□□ 0.11
HOXC11-202ENST00000546378 ATP6V1G2O95670 118 aa15.77■□□□□ 0.11
HOXC11-202ENST00000546378 DCAF12L1Q5VU92 463 aa15.77■□□□□ 0.11
HOXC11-202ENST00000546378 SLFN13Q68D06 897 aa15.77■□□□□ 0.11
HOXC11-202ENST00000546378 ERICH1Q86X53 443 aa15.77■□□□□ 0.11
HOXC11-202ENST00000546378 PRMT6Q96LA8 375 aaPredicted RBP15.77■□□□□ 0.11
HOXC11-202ENST00000546378 MTA3Q9BTC8 594 aa15.77■□□□□ 0.11
HOXC11-202ENST00000546378 PIM2Q9P1W9 311 aa15.77■□□□□ 0.11
HOXC11-202ENST00000546378 SLC12A6Q9UHW9 1150 aa15.77■□□□□ 0.11
HOXC11-202ENST00000546378 SERPINB13Q9UIV8 391 aa15.77■□□□□ 0.11
HOXC11-202ENST00000546378 COG5Q9UP83 839 aa15.77■□□□□ 0.11
HOXC11-202ENST00000546378 FAM86B1E9PN63 330 aa15.76■□□□□ 0.11
HOXC11-202ENST00000546378 K7ENM7 598 aa15.76■□□□□ 0.11
HOXC11-202ENST00000546378 CALUO43852 315 aaPredicted RBP15.76■□□□□ 0.11
HOXC11-202ENST00000546378 HLA-DOAP06340 250 aa15.76■□□□□ 0.11
HOXC11-202ENST00000546378 FAM86B2P0C5J1 330 aa15.76■□□□□ 0.11
HOXC11-202ENST00000546378 TARSP26639 723 aaKnown RBP15.76■□□□□ 0.11
HOXC11-202ENST00000546378 DPH6Q7L8W6 267 aa15.76■□□□□ 0.11
HOXC11-202ENST00000546378 ZNF653Q96CK0 615 aa15.76■□□□□ 0.11
HOXC11-202ENST00000546378 PBKQ96KB5 322 aa15.76■□□□□ 0.11
HOXC11-202ENST00000546378 RAB17Q9H0T7 212 aa15.76■□□□□ 0.11
HOXC11-202ENST00000546378 ARHGEF10LQ9HCE6 1279 aa15.76■□□□□ 0.11
HOXC11-202ENST00000546378 PJA2O43164 708 aa15.76■□□□□ 0.11
HOXC11-202ENST00000546378 PYGMP11217 842 aa15.76■□□□□ 0.11
HOXC11-202ENST00000546378 KRT15P19012 456 aa15.76■□□□□ 0.11
HOXC11-202ENST00000546378 DRD4P21917 467 aa15.76■□□□□ 0.11
HOXC11-202ENST00000546378 ALDH5A1P51649 535 aaPredicted RBP15.76■□□□□ 0.11
HOXC11-202ENST00000546378 DYNLT1P63172 113 aa15.76■□□□□ 0.11
HOXC11-202ENST00000546378 DNAJC3Q13217 504 aa15.76■□□□□ 0.11
HOXC11-202ENST00000546378 MTMR3Q13615 1198 aa15.76■□□□□ 0.11
HOXC11-202ENST00000546378 GIT2Q14161 759 aa15.76■□□□□ 0.11
HOXC11-202ENST00000546378 MDH1BQ5I0G3 518 aa15.76■□□□□ 0.11
HOXC11-202ENST00000546378 DACT2Q5SW24 774 aa15.76■□□□□ 0.11
HOXC11-202ENST00000546378 STRIP1Q5VSL9 837 aa15.76■□□□□ 0.11
HOXC11-202ENST00000546378 TRPM8Q7Z2W7 1104 aa15.76■□□□□ 0.11
HOXC11-202ENST00000546378 SPZ1Q9BXG8 430 aa15.76■□□□□ 0.11
HOXC11-202ENST00000546378 NT5C3AQ9H0P0 336 aa15.76■□□□□ 0.11
HOXC11-202ENST00000546378 EDIL3O43854 480 aa15.76■□□□□ 0.11
HOXC11-202ENST00000546378 BRAFP15056 766 aa15.76■□□□□ 0.11
HOXC11-202ENST00000546378 ATF7P17544 494 aaPredicted RBP15.76■□□□□ 0.11
HOXC11-202ENST00000546378 MYL7Q01449 175 aa15.76■□□□□ 0.11
HOXC11-202ENST00000546378 OVGP1Q12889 678 aa15.76■□□□□ 0.11
HOXC11-202ENST00000546378 LONP2Q86WA8 852 aa15.76■□□□□ 0.11
HOXC11-202ENST00000546378 DTX3LQ8TDB6 740 aa15.76■□□□□ 0.11
HOXC11-202ENST00000546378 ZBTB10Q96DT7 871 aa15.76■□□□□ 0.11
HOXC11-202ENST00000546378 ERP44Q9BS26 406 aa15.76■□□□□ 0.11
HOXC11-202ENST00000546378 RASAL2Q9UJF2 1139 aa15.76■□□□□ 0.11
HOXC11-202ENST00000546378 PNMA6FA0A0J9YX94 578 aa15.75■□□□□ 0.11
HOXC11-202ENST00000546378 EME2A4GXA9 379 aaPredicted RBP15.75■□□□□ 0.11
HOXC11-202ENST00000546378 TTLL1O95922 423 aa15.75■□□□□ 0.11
HOXC11-202ENST00000546378 RPL13P26373 211 aaKnown RBP15.75■□□□□ 0.11
HOXC11-202ENST00000546378 HNRNPH3P31942 346 aaKnown RBP15.75■□□□□ 0.11
HOXC11-202ENST00000546378 CDK17Q00537 523 aa15.75■□□□□ 0.11
HOXC11-202ENST00000546378 PPP4R3AQ6IN85 833 aa15.75■□□□□ 0.11
HOXC11-202ENST00000546378 GALNT17Q6IS24 598 aa15.75■□□□□ 0.11
HOXC11-202ENST00000546378 ERMNQ8TAM6 284 aa15.75■□□□□ 0.11
HOXC11-202ENST00000546378 JDP2Q8WYK2 163 aa15.75■□□□□ 0.11
HOXC11-202ENST00000546378 TATDN2Q93075 761 aa15.75■□□□□ 0.11
HOXC11-202ENST00000546378 GPRC5CQ9NQ84 441 aa15.75■□□□□ 0.11
HOXC11-202ENST00000546378 DALRD3Q5D0E6 543 aaKnown RBP15.75■□□□□ 0.11
HOXC11-202ENST00000546378 NIM1KQ8IY84 436 aa15.75■□□□□ 0.11
HOXC11-202ENST00000546378 MSL3Q8N5Y2 521 aaKnown RBP15.75■□□□□ 0.11
HOXC11-202ENST00000546378 SLC35C1Q96A29 364 aa15.75■□□□□ 0.11
HOXC11-202ENST00000546378 LRRC27Q9C0I9 530 aa15.75■□□□□ 0.11
HOXC11-202ENST00000546378 TOPORSQ9NS56 1045 aaPredicted RBP15.75■□□□□ 0.11
HOXC11-202ENST00000546378 EMSYQ7Z589 1322 aa15.75■□□□□ 0.11
HOXC11-202ENST00000546378 SEPT7Q16181 437 aaKnown RBP15.74■□□□□ 0.11
HOXC11-202ENST00000546378 MAGEF1Q9HAY2 307 aa15.74■□□□□ 0.11
HOXC11-202ENST00000546378 SWAP70Q9UH65 585 aa15.74■□□□□ 0.11
HOXC11-202ENST00000546378 COL24A1Q17RW2 1714 aa15.74■□□□□ 0.11
HOXC11-202ENST00000546378 CEP350Q5VT06 3117 aa15.74■□□□□ 0.11
HOXC11-202ENST00000546378 DDTLA6NHG4 134 aaPredicted RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms