RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 TMEM161AQ9NX61 479 aa18.54■□□□□ 0.56
LTBR-215ENST00000546296 PHLPP2Q6ZVD8 1323 aa18.53■□□□□ 0.56
LTBR-215ENST00000546296 ADGRA3Q8IWK6 1321 aa18.53■□□□□ 0.56
LTBR-215ENST00000546296 LOXHD1Q8IVV2 1947 aa18.53■□□□□ 0.56
LTBR-215ENST00000546296 A0A1W2PQ27 194 aa18.53■□□□□ 0.56
LTBR-215ENST00000546296 A0A1W2PQ64 194 aa18.53■□□□□ 0.56
LTBR-215ENST00000546296 A0A1W2PQD8 194 aa18.53■□□□□ 0.56
LTBR-215ENST00000546296 H0YCG3 227 aa18.53■□□□□ 0.56
LTBR-215ENST00000546296 ACKR2O00590 384 aa18.53■□□□□ 0.56
LTBR-215ENST00000546296 IDEP14735 1019 aa18.53■□□□□ 0.56
LTBR-215ENST00000546296 ARF4P18085 180 aaPredicted RBP18.53■□□□□ 0.56
LTBR-215ENST00000546296 RAB27AP51159 221 aa18.53■□□□□ 0.56
LTBR-215ENST00000546296 HTRA4P83105 476 aaPredicted RBP18.53■□□□□ 0.56
LTBR-215ENST00000546296 FAM187BQ17R55 369 aa18.53■□□□□ 0.56
LTBR-215ENST00000546296 CSPP1Q1MSJ5 1256 aa18.53■□□□□ 0.56
LTBR-215ENST00000546296 MRPS27Q92552 414 aaKnown RBP18.53■□□□□ 0.56
LTBR-215ENST00000546296 CCDC113Q9H0I3 377 aa18.53■□□□□ 0.56
LTBR-215ENST00000546296 TMEM134Q9H6X4 195 aa18.53■□□□□ 0.56
LTBR-215ENST00000546296 MAGEF1Q9HAY2 307 aa18.53■□□□□ 0.56
LTBR-215ENST00000546296 FAM105AQ9NUU6 356 aa18.53■□□□□ 0.56
LTBR-215ENST00000546296 PCDHB2Q9Y5E7 798 aa18.53■□□□□ 0.56
LTBR-215ENST00000546296 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.52■□□□□ 0.56
LTBR-215ENST00000546296 LCHNA4D1U4 455 aa18.52■□□□□ 0.56
LTBR-215ENST00000546296 DGKIO75912 1065 aa18.52■□□□□ 0.56
LTBR-215ENST00000546296 EOMESO95936 686 aa18.52■□□□□ 0.56
LTBR-215ENST00000546296 SYKP43405 635 aa18.52■□□□□ 0.56
LTBR-215ENST00000546296 ZNF131P52739 623 aa18.52■□□□□ 0.56
LTBR-215ENST00000546296 STRN3Q13033 797 aa18.52■□□□□ 0.56
LTBR-215ENST00000546296 BTG3Q14201 252 aaPredicted RBP18.52■□□□□ 0.56
LTBR-215ENST00000546296 FAM178BQ8IXR5 827 aa18.52■□□□□ 0.56
LTBR-215ENST00000546296 CRIPAKQ8N1N5 446 aa18.52■□□□□ 0.56
LTBR-215ENST00000546296 PGBD4Q96DM1 585 aa18.52■□□□□ 0.56
LTBR-215ENST00000546296 FAM161BQ96MY7 647 aa18.52■□□□□ 0.56
LTBR-215ENST00000546296 TRAIPQ9BWF2 469 aa18.52■□□□□ 0.56
LTBR-215ENST00000546296 TRIM6Q9C030 488 aaPredicted RBP18.52■□□□□ 0.56
LTBR-215ENST00000546296 ZNF576Q9H609 170 aa18.52■□□□□ 0.56
LTBR-215ENST00000546296 KBTBD4Q9NVX7 518 aa18.52■□□□□ 0.56
LTBR-215ENST00000546296 ARHGAP28Q9P2N2 729 aa18.52■□□□□ 0.56
LTBR-215ENST00000546296 SERTAD1Q9UHV2 236 aa18.52■□□□□ 0.56
LTBR-215ENST00000546296 MICAL3Q7RTP6 2002 aa18.52■□□□□ 0.55
LTBR-215ENST00000546296 CNTNAP2Q9UHC6 1331 aa18.51■□□□□ 0.55
LTBR-215ENST00000546296 TMEM265A0A087WTH1 108 aa18.51■□□□□ 0.55
LTBR-215ENST00000546296 N4BP3O15049 544 aa18.51■□□□□ 0.55
LTBR-215ENST00000546296 HOXA2O43364 376 aa18.51■□□□□ 0.55
LTBR-215ENST00000546296 TRAK2O60296 914 aa18.51■□□□□ 0.55
LTBR-215ENST00000546296 FGFR1P11362 822 aa18.51■□□□□ 0.55
LTBR-215ENST00000546296 GAP43P17677 238 aa18.51■□□□□ 0.55
LTBR-215ENST00000546296 NDUFA8P51970 172 aa18.51■□□□□ 0.55
LTBR-215ENST00000546296 LONRF3Q496Y0 759 aa18.51■□□□□ 0.55
LTBR-215ENST00000546296 PAN2Q504Q3 1202 aaKnown RBP18.51■□□□□ 0.55
LTBR-215ENST00000546296 UBXN11Q5T124 520 aa18.51■□□□□ 0.55
LTBR-215ENST00000546296 SLC27A1Q6PCB7 646 aa18.51■□□□□ 0.55
LTBR-215ENST00000546296 CDR2LQ86X02 465 aaPredicted RBP18.51■□□□□ 0.55
LTBR-215ENST00000546296 CCDC65Q8IXS2 484 aa18.51■□□□□ 0.55
LTBR-215ENST00000546296 ABI1Q8IZP0 508 aa18.51■□□□□ 0.55
LTBR-215ENST00000546296 FIBCD1Q8N539 461 aa18.51■□□□□ 0.55
LTBR-215ENST00000546296 DEFB123Q8N688 67 aa18.51■□□□□ 0.55
LTBR-215ENST00000546296 TMEM161BQ8NDZ6 487 aa18.51■□□□□ 0.55
LTBR-215ENST00000546296 DNAJC19Q96DA6 116 aa18.51■□□□□ 0.55
LTBR-215ENST00000546296 MRPL4Q9BYD3 311 aaKnown RBP18.51■□□□□ 0.55
LTBR-215ENST00000546296 SEMA6BQ9H3T3 888 aa18.51■□□□□ 0.55
LTBR-215ENST00000546296 PANK4Q9NVE7 773 aa18.51■□□□□ 0.55
LTBR-215ENST00000546296 USP25Q9UHP3 1055 aa18.51■□□□□ 0.55
LTBR-215ENST00000546296 HPSEQ9Y251 543 aa18.51■□□□□ 0.55
LTBR-215ENST00000546296 USP20Q9Y2K6 914 aa18.51■□□□□ 0.55
LTBR-215ENST00000546296 A0A1B0GUA9 196 aa18.5■□□□□ 0.55
LTBR-215ENST00000546296 TBKBP1A7MCY6 615 aa18.5■□□□□ 0.55
LTBR-215ENST00000546296 K7ENM7 598 aa18.5■□□□□ 0.55
LTBR-215ENST00000546296 ZNF623O75123 536 aa18.5■□□□□ 0.55
LTBR-215ENST00000546296 NPTXRO95502 500 aa18.5■□□□□ 0.55
LTBR-215ENST00000546296 SLFN14P0C7P3 912 aa18.5■□□□□ 0.55
LTBR-215ENST00000546296 MAPTP10636 758 aaKnown RBP18.5■□□□□ 0.55
LTBR-215ENST00000546296 AFMP43652 599 aa18.5■□□□□ 0.55
LTBR-215ENST00000546296 GATMP50440 423 aa18.5■□□□□ 0.55
LTBR-215ENST00000546296 NCKAP1LP55160 1127 aa18.5■□□□□ 0.55
LTBR-215ENST00000546296 TAP1Q03518 808 aa18.5■□□□□ 0.55
LTBR-215ENST00000546296 HERC4Q5GLZ8 1057 aaPredicted RBP18.5■□□□□ 0.55
LTBR-215ENST00000546296 NT5DC1Q5TFE4 455 aa18.5■□□□□ 0.55
LTBR-215ENST00000546296 ATF7IP2Q5U623 682 aa18.5■□□□□ 0.55
LTBR-215ENST00000546296 Q7L0L9 218 aa18.5■□□□□ 0.55
LTBR-215ENST00000546296 HAUS6Q7Z4H7 955 aa18.5■□□□□ 0.55
LTBR-215ENST00000546296 ZNF598Q86UK7 904 aaKnown RBP18.5■□□□□ 0.55
LTBR-215ENST00000546296 HACE1Q8IYU2 909 aa18.5■□□□□ 0.55
LTBR-215ENST00000546296 SLC17A8Q8NDX2 589 aa18.5■□□□□ 0.55
LTBR-215ENST00000546296 CNNM3Q8NE01 707 aa18.5■□□□□ 0.55
LTBR-215ENST00000546296 ZNF689Q96CS4 500 aaPredicted RBP18.5■□□□□ 0.55
LTBR-215ENST00000546296 ADPGKQ9BRR6 497 aa18.5■□□□□ 0.55
LTBR-215ENST00000546296 EIF2AQ9BY44 585 aaKnown RBP18.5■□□□□ 0.55
LTBR-215ENST00000546296 LAMA3Q16787 3333 aa18.49■□□□□ 0.55
LTBR-215ENST00000546296 FAM237AA0A1B0GTK4 181 aa18.49■□□□□ 0.55
LTBR-215ENST00000546296 LINC01553A4QN01 128 aa18.49■□□□□ 0.55
LTBR-215ENST00000546296 TTLL13PA6NNM8 815 aa18.49■□□□□ 0.55
LTBR-215ENST00000546296 ITGA4P13612 1032 aa18.49■□□□□ 0.55
LTBR-215ENST00000546296 SCP2P22307 547 aa18.49■□□□□ 0.55
LTBR-215ENST00000546296 ASIC1P78348 528 aa18.49■□□□□ 0.55
LTBR-215ENST00000546296 APBB1IPQ7Z5R6 666 aaPredicted RBP18.49■□□□□ 0.55
LTBR-215ENST00000546296 SFR1Q86XK3 245 aa18.49■□□□□ 0.55
LTBR-215ENST00000546296 CMTR2Q8IYT2 770 aaKnown RBP18.49■□□□□ 0.55
LTBR-215ENST00000546296 SP7Q8TDD2 431 aaPredicted RBP18.49■□□□□ 0.55
LTBR-215ENST00000546296 LPPQ93052 612 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms