RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.56■■□□□ 1.2
HMGA2-211ENST00000545998 K7ERI5 159 aa22.56■■□□□ 1.2
HMGA2-211ENST00000545998 TRAK2O60296 914 aa22.56■■□□□ 1.2
HMGA2-211ENST00000545998 MAPTP10636 758 aaKnown RBP22.56■■□□□ 1.2
HMGA2-211ENST00000545998 ARF4P18085 180 aaPredicted RBP22.56■■□□□ 1.2
HMGA2-211ENST00000545998 AFMP43652 599 aa22.56■■□□□ 1.2
HMGA2-211ENST00000545998 SARSP49591 514 aaKnown RBP22.56■■□□□ 1.2
HMGA2-211ENST00000545998 FAM189BP81408 668 aa22.56■■□□□ 1.2
HMGA2-211ENST00000545998 HERC6Q8IVU3 1022 aa22.56■■□□□ 1.2
HMGA2-211ENST00000545998 KCNN1Q92952 543 aa22.56■■□□□ 1.2
HMGA2-211ENST00000545998 TRAIPQ9BWF2 469 aa22.56■■□□□ 1.2
HMGA2-211ENST00000545998 DACT1Q9NYF0 836 aa22.56■■□□□ 1.2
HMGA2-211ENST00000545998 SEL1LQ9UBV2 794 aa22.56■■□□□ 1.2
HMGA2-211ENST00000545998 GRXCR1A8MXD5 290 aa22.55■■□□□ 1.2
HMGA2-211ENST00000545998 ACKR2O00590 384 aa22.55■■□□□ 1.2
HMGA2-211ENST00000545998 EDN1P05305 212 aa22.55■■□□□ 1.2
HMGA2-211ENST00000545998 IDEP14735 1019 aa22.55■■□□□ 1.2
HMGA2-211ENST00000545998 GAP43P17677 238 aa22.55■■□□□ 1.2
HMGA2-211ENST00000545998 CASP1P29466 404 aa22.55■■□□□ 1.2
HMGA2-211ENST00000545998 FAM160A1Q05DH4 1040 aa22.55■■□□□ 1.2
HMGA2-211ENST00000545998 KRBA2Q6ZNG9 492 aa22.55■■□□□ 1.2
HMGA2-211ENST00000545998 SFR1Q86XK3 245 aa22.55■■□□□ 1.2
HMGA2-211ENST00000545998 CPB2Q96IY4 423 aa22.55■■□□□ 1.2
HMGA2-211ENST00000545998 PANK4Q9NVE7 773 aa22.55■■□□□ 1.2
HMGA2-211ENST00000545998 CNTNAP2Q9UHC6 1331 aa22.55■■□□□ 1.2
HMGA2-211ENST00000545998 TTLL13PA6NNM8 815 aa22.55■■□□□ 1.2
HMGA2-211ENST00000545998 GJB5O95377 273 aa22.55■■□□□ 1.2
HMGA2-211ENST00000545998 LIG1P18858 919 aa22.55■■□□□ 1.2
HMGA2-211ENST00000545998 ASIC1P78348 528 aa22.55■■□□□ 1.2
HMGA2-211ENST00000545998 NCBP1Q09161 790 aaKnown RBP22.55■■□□□ 1.2
HMGA2-211ENST00000545998 CUL4BQ13620 913 aa22.55■■□□□ 1.2
HMGA2-211ENST00000545998 HABP4Q5JVS0 413 aaKnown RBP22.55■■□□□ 1.2
HMGA2-211ENST00000545998 TWF2Q6IBS0 349 aaKnown RBP22.55■■□□□ 1.2
HMGA2-211ENST00000545998 NOTUMQ6P988 496 aa22.55■■□□□ 1.2
HMGA2-211ENST00000545998 HAUS6Q7Z4H7 955 aa22.55■■□□□ 1.2
HMGA2-211ENST00000545998 FAM178BQ8IXR5 827 aa22.55■■□□□ 1.2
HMGA2-211ENST00000545998 CCDC65Q8IXS2 484 aa22.55■■□□□ 1.2
HMGA2-211ENST00000545998 CNNM3Q8NE01 707 aa22.55■■□□□ 1.2
HMGA2-211ENST00000545998 BLZF1Q9H2G9 400 aa22.55■■□□□ 1.2
HMGA2-211ENST00000545998 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.54■■□□□ 1.2
HMGA2-211ENST00000545998 A0A0U1RQF3 1178 aa22.54■■□□□ 1.2
HMGA2-211ENST00000545998 A0A1B0GUA9 196 aa22.54■■□□□ 1.2
HMGA2-211ENST00000545998 H0YCG3 227 aa22.54■■□□□ 1.2
HMGA2-211ENST00000545998 K7ENM7 598 aa22.54■■□□□ 1.2
HMGA2-211ENST00000545998 PRPF40AO75400 957 aaKnown RBP22.54■■□□□ 1.2
HMGA2-211ENST00000545998 SCP2P22307 547 aa22.54■■□□□ 1.2
HMGA2-211ENST00000545998 UBE2HP62256 183 aa22.54■■□□□ 1.2
HMGA2-211ENST00000545998 SMAD3P84022 425 aaKnown RBP22.54■■□□□ 1.2
HMGA2-211ENST00000545998 PRPF4BQ13523 1007 aaKnown RBP22.54■■□□□ 1.2
HMGA2-211ENST00000545998 HERC4Q5GLZ8 1057 aaPredicted RBP22.54■■□□□ 1.2
HMGA2-211ENST00000545998 UBXN11Q5T124 520 aa22.54■■□□□ 1.2
HMGA2-211ENST00000545998 CCDC51Q96ER9 411 aa22.54■■□□□ 1.2
HMGA2-211ENST00000545998 USP20Q9Y2K6 914 aa22.54■■□□□ 1.2
HMGA2-211ENST00000545998 UPP2O95045 317 aa22.53■■□□□ 1.2
HMGA2-211ENST00000545998 NMT1P30419 496 aaKnown RBP22.53■■□□□ 1.2
HMGA2-211ENST00000545998 RABGGTBP53611 331 aa22.53■■□□□ 1.2
HMGA2-211ENST00000545998 COASYQ13057 564 aa22.53■■□□□ 1.2
HMGA2-211ENST00000545998 NT5DC1Q5TFE4 455 aa22.53■■□□□ 1.2
HMGA2-211ENST00000545998 FAM117BQ6P1L5 589 aa22.53■■□□□ 1.2
HMGA2-211ENST00000545998 NPAS4Q8IUM7 802 aa22.53■■□□□ 1.2
HMGA2-211ENST00000545998 SLC17A8Q8NDX2 589 aa22.53■■□□□ 1.2
HMGA2-211ENST00000545998 GBP4Q96PP9 640 aa22.53■■□□□ 1.2
HMGA2-211ENST00000545998 ST6GALNAC4Q9H4F1 302 aa22.53■■□□□ 1.2
HMGA2-211ENST00000545998 OLFML3Q9NRN5 406 aa22.53■■□□□ 1.2
HMGA2-211ENST00000545998 NR1I2O75469 434 aa22.52■■□□□ 1.2
HMGA2-211ENST00000545998 MYL1P05976 194 aa22.52■■□□□ 1.2
HMGA2-211ENST00000545998 UNC13DQ70J99 1090 aa22.52■■□□□ 1.2
HMGA2-211ENST00000545998 ZNF720Q7Z2F6 126 aa22.52■■□□□ 1.2
HMGA2-211ENST00000545998 ECHDC2Q86YB7 292 aa22.52■■□□□ 1.2
HMGA2-211ENST00000545998 PBX4Q9BYU1 374 aa22.52■■□□□ 1.2
HMGA2-211ENST00000545998 ELAC1Q9H777 363 aaKnown RBP22.52■■□□□ 1.2
HMGA2-211ENST00000545998 FAM105AQ9NUU6 356 aa22.52■■□□□ 1.2
HMGA2-211ENST00000545998 TMEM161AQ9NX61 479 aa22.52■■□□□ 1.2
HMGA2-211ENST00000545998 SOX1O00570 391 aaPredicted RBP22.51■■□□□ 1.19
HMGA2-211ENST00000545998 GTPBP6O43824 516 aaPredicted RBP22.51■■□□□ 1.19
HMGA2-211ENST00000545998 STAG3L1P0CL83 205 aa22.51■■□□□ 1.19
HMGA2-211ENST00000545998 ATF7P17544 494 aaPredicted RBP22.51■■□□□ 1.19
HMGA2-211ENST00000545998 HTRA4P83105 476 aaPredicted RBP22.51■■□□□ 1.19
HMGA2-211ENST00000545998 GTF2BQ00403 316 aa22.51■■□□□ 1.19
HMGA2-211ENST00000545998 STRN3Q13033 797 aa22.51■■□□□ 1.19
HMGA2-211ENST00000545998 ZNF598Q86UK7 904 aaKnown RBP22.51■■□□□ 1.19
HMGA2-211ENST00000545998 CDR2LQ86X02 465 aaPredicted RBP22.51■■□□□ 1.19
HMGA2-211ENST00000545998 ZBED2Q9BTP6 218 aa22.51■■□□□ 1.19
HMGA2-211ENST00000545998 EIF2AQ9BY44 585 aaKnown RBP22.51■■□□□ 1.19
HMGA2-211ENST00000545998 MRPL4Q9BYD3 311 aaKnown RBP22.51■■□□□ 1.19
HMGA2-211ENST00000545998 PDZD7Q9H5P4 517 aa22.51■■□□□ 1.19
HMGA2-211ENST00000545998 MRPL44Q9H9J2 332 aaKnown RBP22.51■■□□□ 1.19
HMGA2-211ENST00000545998 RNF216Q9NWF9 866 aaPredicted RBP22.51■■□□□ 1.19
HMGA2-211ENST00000545998 TBC1D7Q9P0N9 293 aa22.51■■□□□ 1.19
HMGA2-211ENST00000545998 TBX20Q9UMR3 447 aa22.51■■□□□ 1.19
HMGA2-211ENST00000545998 PCDHB7Q9Y5E2 793 aa22.51■■□□□ 1.19
HMGA2-211ENST00000545998 PCDHA11Q9Y5I1 949 aa22.51■■□□□ 1.19
HMGA2-211ENST00000545998 COL4A6Q14031 1691 aa22.51■■□□□ 1.19
HMGA2-211ENST00000545998 FNDC1Q4ZHG4 1894 aaPredicted RBP22.51■■□□□ 1.19
HMGA2-211ENST00000545998 PVALEFA0A1B0GWK0 134 aa22.5■■□□□ 1.19
HMGA2-211ENST00000545998 ZNF623O75123 536 aa22.5■■□□□ 1.19
HMGA2-211ENST00000545998 SKIP12755 728 aa22.5■■□□□ 1.19
HMGA2-211ENST00000545998 IBSPP21815 317 aaPredicted RBP22.5■■□□□ 1.19
HMGA2-211ENST00000545998 ABCD1P33897 745 aa22.5■■□□□ 1.19
HMGA2-211ENST00000545998 PBX2P40425 430 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms