RNA–Protein interactions for RNA: ENST00000545882.5

CNN3-207, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,902 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-207ENST00000545882 DRG2P55039 364 aaKnown RBP16.5■□□□□ 0.23
CNN3-207ENST00000545882 DHX34Q14147 1143 aaKnown RBP16.5■□□□□ 0.23
CNN3-207ENST00000545882 MYBPC2Q14324 1141 aa16.5■□□□□ 0.23
CNN3-207ENST00000545882 AOC3Q16853 763 aa16.5■□□□□ 0.23
CNN3-207ENST00000545882 SPRED3Q2MJR0 410 aa16.5■□□□□ 0.23
CNN3-207ENST00000545882 UBAP2Q5T6F2 1119 aaKnown RBP16.5■□□□□ 0.23
CNN3-207ENST00000545882 RNF187Q5TA31 235 aaPredicted RBP16.5■□□□□ 0.23
CNN3-207ENST00000545882 C11orf63Q6NUN7 778 aa16.5■□□□□ 0.23
CNN3-207ENST00000545882 FMNL3Q8IVF7 1028 aa16.5■□□□□ 0.23
CNN3-207ENST00000545882 RHOT2Q8IXI1 618 aa16.5■□□□□ 0.23
CNN3-207ENST00000545882 SYCP3Q8IZU3 236 aa16.5■□□□□ 0.23
CNN3-207ENST00000545882 PRELID2Q8N945 189 aa16.5■□□□□ 0.23
CNN3-207ENST00000545882 MDM1Q8TC05 714 aa16.5■□□□□ 0.23
CNN3-207ENST00000545882 C18orf8Q96DM3 657 aa16.5■□□□□ 0.23
CNN3-207ENST00000545882 PCDHB18PQ96TA0 734 aa16.5■□□□□ 0.23
CNN3-207ENST00000545882 NAP1L3Q99457 506 aaPredicted RBP16.5■□□□□ 0.23
CNN3-207ENST00000545882 PSMD1Q99460 953 aa16.5■□□□□ 0.23
CNN3-207ENST00000545882 TEKT3Q9BXF9 490 aa16.5■□□□□ 0.23
CNN3-207ENST00000545882 WDR11Q9BZH6 1224 aa16.5■□□□□ 0.23
CNN3-207ENST00000545882 VCPKMTQ9H867 229 aa16.5■□□□□ 0.23
CNN3-207ENST00000545882 SNX24Q9Y343 169 aa16.5■□□□□ 0.23
CNN3-207ENST00000545882 PCDHA3Q9Y5H8 950 aa16.5■□□□□ 0.23
CNN3-207ENST00000545882 ARHGEF35A5YM69 484 aa16.49■□□□□ 0.23
CNN3-207ENST00000545882 PHF2O75151 1096 aa16.49■□□□□ 0.23
CNN3-207ENST00000545882 CHRNB2P17787 502 aa16.49■□□□□ 0.23
CNN3-207ENST00000545882 PEX5P50542 639 aa16.49■□□□□ 0.23
CNN3-207ENST00000545882 EIF3BP55884 814 aaKnown RBP16.49■□□□□ 0.23
CNN3-207ENST00000545882 CHADLQ6NUI6 762 aa16.49■□□□□ 0.23
CNN3-207ENST00000545882 TTC27Q6P3X3 843 aa16.49■□□□□ 0.23
CNN3-207ENST00000545882 KAT5Q92993 513 aa16.49■□□□□ 0.23
CNN3-207ENST00000545882 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.49■□□□□ 0.23
CNN3-207ENST00000545882 GOLGA6L10A0A0M3HER8 536 aa16.49■□□□□ 0.23
CNN3-207ENST00000545882 K7ENM7 598 aa16.49■□□□□ 0.23
CNN3-207ENST00000545882 ALAS1P13196 640 aa16.49■□□□□ 0.23
CNN3-207ENST00000545882 CTNNA2P26232 953 aa16.49■□□□□ 0.23
CNN3-207ENST00000545882 CHRNA5P30532 468 aa16.49■□□□□ 0.23
CNN3-207ENST00000545882 GTF2A1P52655 376 aaPredicted RBP16.49■□□□□ 0.23
CNN3-207ENST00000545882 PMS2P54278 862 aa16.49■□□□□ 0.23
CNN3-207ENST00000545882 PLTPP55058 493 aa16.49■□□□□ 0.23
CNN3-207ENST00000545882 ZNF746Q6NUN9 644 aaPredicted RBP16.49■□□□□ 0.23
CNN3-207ENST00000545882 PADI6Q6TGC4 694 aa16.49■□□□□ 0.23
CNN3-207ENST00000545882 MAEAQ7L5Y9 396 aa16.49■□□□□ 0.23
CNN3-207ENST00000545882 CPNE8Q86YQ8 564 aa16.49■□□□□ 0.23
CNN3-207ENST00000545882 RPUSD2Q8IZ73 545 aaKnown RBP16.49■□□□□ 0.23
CNN3-207ENST00000545882 FBXO25Q8TCJ0 367 aa16.49■□□□□ 0.23
CNN3-207ENST00000545882 TATDN2Q93075 761 aa16.49■□□□□ 0.23
CNN3-207ENST00000545882 CNKSR1Q969H4 720 aa16.49■□□□□ 0.23
CNN3-207ENST00000545882 SEC16BQ96JE7 1060 aa16.49■□□□□ 0.23
CNN3-207ENST00000545882 ZSWIM1Q9BR11 485 aa16.49■□□□□ 0.23
CNN3-207ENST00000545882 CBWD1Q9BRT8 395 aa16.49■□□□□ 0.23
CNN3-207ENST00000545882 OSBPL7Q9BZF2 842 aa16.49■□□□□ 0.23
CNN3-207ENST00000545882 PABPC3Q9H361 631 aaKnown RBP16.49■□□□□ 0.23
CNN3-207ENST00000545882 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.49■□□□□ 0.23
CNN3-207ENST00000545882 CTTNBP2NLQ9P2B4 639 aa16.49■□□□□ 0.23
CNN3-207ENST00000545882 CHORDC1Q9UHD1 332 aaPredicted RBP16.49■□□□□ 0.23
CNN3-207ENST00000545882 PNMA2Q9UL42 364 aa16.49■□□□□ 0.23
CNN3-207ENST00000545882 RPTORQ8N122 1335 aa16.48■□□□□ 0.23
CNN3-207ENST00000545882 WDR81Q562E7 1941 aa16.48■□□□□ 0.23
CNN3-207ENST00000545882 YDJCA8MPS7 323 aa16.48■□□□□ 0.23
CNN3-207ENST00000545882 DDX39AO00148 427 aaKnown RBP16.48■□□□□ 0.23
CNN3-207ENST00000545882 IPO5O00410 1097 aaKnown RBP16.48■□□□□ 0.23
CNN3-207ENST00000545882 BCRP11274 1271 aa16.48■□□□□ 0.23
CNN3-207ENST00000545882 DRD4P21917 467 aa16.48■□□□□ 0.23
CNN3-207ENST00000545882 GCLMP48507 274 aa16.48■□□□□ 0.23
CNN3-207ENST00000545882 VAMP7P51809 220 aa16.48■□□□□ 0.23
CNN3-207ENST00000545882 TRAF1Q13077 416 aa16.48■□□□□ 0.23
CNN3-207ENST00000545882 TMEM174Q8WUU8 243 aa16.48■□□□□ 0.23
CNN3-207ENST00000545882 CD101Q93033 1021 aa16.48■□□□□ 0.23
CNN3-207ENST00000545882 ARHGEF10LQ9HCE6 1279 aa16.48■□□□□ 0.23
CNN3-207ENST00000545882 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.48■□□□□ 0.23
CNN3-207ENST00000545882 TMEM110-MUSTN1A8MSY1 372 aa16.47■□□□□ 0.23
CNN3-207ENST00000545882 PHF20L1A8MW92 1017 aa16.47■□□□□ 0.23
CNN3-207ENST00000545882 MIF4GDA9UHW6 222 aaKnown RBP16.47■□□□□ 0.23
CNN3-207ENST00000545882 SGPL1O95470 568 aa16.47■□□□□ 0.23
CNN3-207ENST00000545882 KRT13P13646 458 aa16.47■□□□□ 0.23
CNN3-207ENST00000545882 ITGB5P18084 799 aa16.47■□□□□ 0.23
CNN3-207ENST00000545882 COMTP21964 271 aa16.47■□□□□ 0.23
CNN3-207ENST00000545882 RPL21P46778 160 aaKnown RBP16.47■□□□□ 0.23
CNN3-207ENST00000545882 GPC5P78333 572 aa16.47■□□□□ 0.23
CNN3-207ENST00000545882 IFFO1Q0D2I5 559 aa16.47■□□□□ 0.23
CNN3-207ENST00000545882 SWT1Q5T5J6 900 aaKnown RBP16.47■□□□□ 0.23
CNN3-207ENST00000545882 ERMARDQ5T6L9 678 aa16.47■□□□□ 0.23
CNN3-207ENST00000545882 ZNF772Q68DY9 489 aaPredicted RBP16.47■□□□□ 0.23
CNN3-207ENST00000545882 INTS8Q75QN2 995 aaKnown RBP16.47■□□□□ 0.23
CNN3-207ENST00000545882 CCDC13Q8IYE1 715 aa16.47■□□□□ 0.23
CNN3-207ENST00000545882 RPS6KC1Q96S38 1066 aa16.47■□□□□ 0.23
CNN3-207ENST00000545882 MXRA8Q9BRK3 442 aa16.47■□□□□ 0.23
CNN3-207ENST00000545882 ADAM7Q9H2U9 754 aa16.47■□□□□ 0.23
CNN3-207ENST00000545882 ZNF219Q9P2Y4 722 aaPredicted RBP16.47■□□□□ 0.23
CNN3-207ENST00000545882 PCYOX1Q9UHG3 505 aa16.47■□□□□ 0.23
CNN3-207ENST00000545882 NOCTQ9UK39 431 aaKnown RBP16.47■□□□□ 0.23
CNN3-207ENST00000545882 MRPL11Q9Y3B7 192 aaKnown RBP16.47■□□□□ 0.23
CNN3-207ENST00000545882 PFASO15067 1338 aa16.47■□□□□ 0.23
CNN3-207ENST00000545882 SYNGAP1Q96PV0 1343 aa16.47■□□□□ 0.23
CNN3-207ENST00000545882 TCRBV7S2A1N4TA0A589 114 aa16.47■□□□□ 0.23
CNN3-207ENST00000545882 P4HA2O15460 535 aa16.47■□□□□ 0.23
CNN3-207ENST00000545882 DHX15O43143 795 aaKnown RBP16.47■□□□□ 0.23
CNN3-207ENST00000545882 RTN2O75298 545 aa16.47■□□□□ 0.23
CNN3-207ENST00000545882 MTA2O94776 668 aa16.47■□□□□ 0.23
CNN3-207ENST00000545882 CHRNA3P32297 505 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms