RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 IFNLR1Q8IU57 520 aaPredicted RBP7.68□□□□□ -1.18
HMGCS2-204ENST00000544913 IQCDQ96DY2 449 aa7.68□□□□□ -1.18
HMGCS2-204ENST00000544913 PPP1R13BQ96KQ4 1090 aa7.68□□□□□ -1.18
HMGCS2-204ENST00000544913 HAPLN2Q9GZV7 340 aa7.68□□□□□ -1.18
HMGCS2-204ENST00000544913 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.68□□□□□ -1.18
HMGCS2-204ENST00000544913 AGPAT3Q9NRZ7 376 aa7.68□□□□□ -1.18
HMGCS2-204ENST00000544913 HDAC6Q9UBN7 1215 aa7.68□□□□□ -1.18
HMGCS2-204ENST00000544913 LIMA1Q9UHB6 759 aaKnown RBP7.68□□□□□ -1.18
HMGCS2-204ENST00000544913 TBX20Q9UMR3 447 aa7.68□□□□□ -1.18
HMGCS2-204ENST00000544913 USP20Q9Y2K6 914 aa7.68□□□□□ -1.18
HMGCS2-204ENST00000544913 NRCAMQ92823 1304 aa7.67□□□□□ -1.18
HMGCS2-204ENST00000544913 BICDL2A1A5D9 508 aa7.67□□□□□ -1.18
HMGCS2-204ENST00000544913 DENND3A2RUS2 1198 aa7.67□□□□□ -1.18
HMGCS2-204ENST00000544913 TREHO43280 583 aa7.67□□□□□ -1.18
HMGCS2-204ENST00000544913 FAM189A1O60320 539 aa7.67□□□□□ -1.18
HMGCS2-204ENST00000544913 MSCO60682 206 aa7.67□□□□□ -1.18
HMGCS2-204ENST00000544913 ASGR1P07306 291 aa7.67□□□□□ -1.18
HMGCS2-204ENST00000544913 MARSP56192 900 aaKnown RBP7.67□□□□□ -1.18
HMGCS2-204ENST00000544913 TUBB4BP68371 445 aa7.67□□□□□ -1.18
HMGCS2-204ENST00000544913 TUBB2AQ13885 445 aa7.67□□□□□ -1.18
HMGCS2-204ENST00000544913 KRT31Q15323 416 aa7.67□□□□□ -1.18
HMGCS2-204ENST00000544913 NBPF20Q3BBV1 942 aa7.67□□□□□ -1.18
HMGCS2-204ENST00000544913 MIIPQ5JXC2 388 aa7.67□□□□□ -1.18
HMGCS2-204ENST00000544913 SESTD1Q86VW0 696 aa7.67□□□□□ -1.18
HMGCS2-204ENST00000544913 FAM114A1Q8IWE2 563 aa7.67□□□□□ -1.18
HMGCS2-204ENST00000544913 C12orf56Q8IXR9 622 aa7.67□□□□□ -1.18
HMGCS2-204ENST00000544913 CSGALNACT2Q8N6G5 542 aa7.67□□□□□ -1.18
HMGCS2-204ENST00000544913 ANKRD7Q92527 254 aa7.67□□□□□ -1.18
HMGCS2-204ENST00000544913 HVCN1Q96D96 273 aa7.67□□□□□ -1.18
HMGCS2-204ENST00000544913 CBWD1Q9BRT8 395 aa7.67□□□□□ -1.18
HMGCS2-204ENST00000544913 MTG1Q9BT17 334 aaPredicted RBP7.67□□□□□ -1.18
HMGCS2-204ENST00000544913 BEGAINQ9BUH8 593 aa7.67□□□□□ -1.18
HMGCS2-204ENST00000544913 TUBB2BQ9BVA1 445 aa7.67□□□□□ -1.18
HMGCS2-204ENST00000544913 ADAMTS10Q9H324 1103 aa7.67□□□□□ -1.18
HMGCS2-204ENST00000544913 THAP9Q9H5L6 903 aa7.67□□□□□ -1.18
HMGCS2-204ENST00000544913 SUGCTQ9HAC7 445 aa7.67□□□□□ -1.18
HMGCS2-204ENST00000544913 TYW1Q9NV66 732 aaKnown RBP7.67□□□□□ -1.18
HMGCS2-204ENST00000544913 TRMT1Q9NXH9 659 aaKnown RBP7.67□□□□□ -1.18
HMGCS2-204ENST00000544913 CGNQ9P2M7 1197 aaKnown RBP7.67□□□□□ -1.18
HMGCS2-204ENST00000544913 SUCLA2Q9P2R7 463 aaPredicted RBP7.67□□□□□ -1.18
HMGCS2-204ENST00000544913 KAT6AQ92794 2004 aa7.67□□□□□ -1.18
HMGCS2-204ENST00000544913 KIAA0100Q14667 2235 aaKnown RBP7.67□□□□□ -1.18
HMGCS2-204ENST00000544913 CCDC169A6NNP5 214 aa7.66□□□□□ -1.18
HMGCS2-204ENST00000544913 MAGEB2O15479 319 aa7.66□□□□□ -1.18
HMGCS2-204ENST00000544913 KPNA6O60684 536 aa7.66□□□□□ -1.18
HMGCS2-204ENST00000544913 GPR32O75388 356 aa7.66□□□□□ -1.18
HMGCS2-204ENST00000544913 AKAP3O75969 853 aa7.66□□□□□ -1.18
HMGCS2-204ENST00000544913 SLU7O95391 586 aaKnown RBP7.66□□□□□ -1.18
HMGCS2-204ENST00000544913 VTNP04004 478 aa7.66□□□□□ -1.18
HMGCS2-204ENST00000544913 NR3C1P04150 777 aa7.66□□□□□ -1.18
HMGCS2-204ENST00000544913 EEF1GP26641 437 aaKnown RBP7.66□□□□□ -1.18
HMGCS2-204ENST00000544913 PBX1P40424 430 aa7.66□□□□□ -1.18
HMGCS2-204ENST00000544913 CASP4P49662 377 aa7.66□□□□□ -1.18
HMGCS2-204ENST00000544913 ACLYP53396 1101 aa7.66□□□□□ -1.18
HMGCS2-204ENST00000544913 PTENP60484 403 aa7.66□□□□□ -1.18
HMGCS2-204ENST00000544913 MBTD1Q05BQ5 628 aa7.66□□□□□ -1.18
HMGCS2-204ENST00000544913 ALCAMQ13740 583 aa7.66□□□□□ -1.18
HMGCS2-204ENST00000544913 PTPN21Q16825 1174 aa7.66□□□□□ -1.18
HMGCS2-204ENST00000544913 TCP11X2Q5H9J9 407 aa7.66□□□□□ -1.18
HMGCS2-204ENST00000544913 GDF6Q6KF10 455 aaPredicted RBP7.66□□□□□ -1.18
HMGCS2-204ENST00000544913 NFRKBQ6P4R8 1299 aa7.66□□□□□ -1.18
HMGCS2-204ENST00000544913 SLC9A9Q8IVB4 645 aa7.66□□□□□ -1.18
HMGCS2-204ENST00000544913 SLC43A3Q8NBI5 491 aa7.66□□□□□ -1.18
HMGCS2-204ENST00000544913 PSPC1Q8WXF1 523 aaKnown RBP7.66□□□□□ -1.18
HMGCS2-204ENST00000544913 ZNF592Q92610 1267 aa7.66□□□□□ -1.18
HMGCS2-204ENST00000544913 DHX38Q92620 1227 aaKnown RBP7.66□□□□□ -1.18
HMGCS2-204ENST00000544913 ZNF668Q96K58 619 aaPredicted RBP7.66□□□□□ -1.18
HMGCS2-204ENST00000544913 NFKBIZQ9BYH8 718 aa7.66□□□□□ -1.18
HMGCS2-204ENST00000544913 FZD8Q9H461 694 aa7.66□□□□□ -1.18
HMGCS2-204ENST00000544913 L2HGDHQ9H9P8 463 aa7.66□□□□□ -1.18
HMGCS2-204ENST00000544913 CDHR5Q9HBB8 845 aa7.66□□□□□ -1.18
HMGCS2-204ENST00000544913 HMX1Q9NP08 348 aaPredicted RBP7.66□□□□□ -1.18
HMGCS2-204ENST00000544913 KMT5AQ9NQR1 393 aa7.66□□□□□ -1.18
HMGCS2-204ENST00000544913 GTF2IRD1Q9UHL9 959 aa7.66□□□□□ -1.18
HMGCS2-204ENST00000544913 STYXL1Q9Y6J8 313 aa7.66□□□□□ -1.18
HMGCS2-204ENST00000544913 RRN3P2A6NIE6 340 aa7.66□□□□□ -1.18
HMGCS2-204ENST00000544913 USP27XA6NNY8 438 aa7.66□□□□□ -1.18
HMGCS2-204ENST00000544913 KCNJ18B7U540 433 aa7.66□□□□□ -1.18
HMGCS2-204ENST00000544913 TEX33O43247 280 aa7.66□□□□□ -1.18
HMGCS2-204ENST00000544913 FGFR1OPO95684 399 aaKnown RBP7.66□□□□□ -1.18
HMGCS2-204ENST00000544913 PROZP22891 400 aa7.66□□□□□ -1.18
HMGCS2-204ENST00000544913 GPC3P51654 580 aa7.66□□□□□ -1.18
HMGCS2-204ENST00000544913 FKBP3Q00688 224 aaKnown RBP7.66□□□□□ -1.18
HMGCS2-204ENST00000544913 POU5F1BQ06416 359 aa7.66□□□□□ -1.18
HMGCS2-204ENST00000544913 KCNJ12Q14500 433 aa7.66□□□□□ -1.18
HMGCS2-204ENST00000544913 MXD4Q14582 209 aaPredicted RBP7.66□□□□□ -1.18
HMGCS2-204ENST00000544913 ARHGEF6Q15052 776 aa7.66□□□□□ -1.18
HMGCS2-204ENST00000544913 TRIM71Q2Q1W2 868 aaKnown RBP7.66□□□□□ -1.18
HMGCS2-204ENST00000544913 SERINC5Q86VE9 423 aa7.66□□□□□ -1.18
HMGCS2-204ENST00000544913 TMTC1Q8IUR5 882 aa7.66□□□□□ -1.18
HMGCS2-204ENST00000544913 TRIM59Q8IWR1 403 aa7.66□□□□□ -1.18
HMGCS2-204ENST00000544913 TC2NQ8N9U0 490 aa7.66□□□□□ -1.18
HMGCS2-204ENST00000544913 RNF149Q8NC42 400 aa7.66□□□□□ -1.18
HMGCS2-204ENST00000544913 PLEKHO2Q8TD55 490 aa7.66□□□□□ -1.18
HMGCS2-204ENST00000544913 TMEM40Q8WWA1 233 aa7.66□□□□□ -1.18
HMGCS2-204ENST00000544913 ARMC5Q96C12 935 aa7.66□□□□□ -1.18
HMGCS2-204ENST00000544913 ZNF333Q96JL9 665 aa7.66□□□□□ -1.18
HMGCS2-204ENST00000544913 CNOT6LQ96LI5 555 aaKnown RBP7.66□□□□□ -1.18
HMGCS2-204ENST00000544913 FBXL18Q96ME1 805 aa7.66□□□□□ -1.18
HMGCS2-204ENST00000544913 CEP63Q96MT8 703 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms