RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 POLR2BP30876 1174 aaKnown RBP6.2□□□□□ -1.42
VPS50-220ENST00000544910 TRIP13Q15645 432 aaPredicted RBP6.2□□□□□ -1.42
VPS50-220ENST00000544910 HSP90AA5PQ58FG0 334 aa6.2□□□□□ -1.42
VPS50-220ENST00000544910 DALRD3Q5D0E6 543 aaKnown RBP6.2□□□□□ -1.42
VPS50-220ENST00000544910 ENOSF1Q7L5Y1 443 aa6.2□□□□□ -1.42
VPS50-220ENST00000544910 PALM2Q8IXS6 379 aa6.2□□□□□ -1.42
VPS50-220ENST00000544910 SAAL1Q96ER3 474 aa6.2□□□□□ -1.42
VPS50-220ENST00000544910 ZIM3Q96PE6 472 aa6.2□□□□□ -1.42
VPS50-220ENST00000544910 NUDT12Q9BQG2 462 aa6.2□□□□□ -1.42
VPS50-220ENST00000544910 PACSIN1Q9BY11 444 aa6.2□□□□□ -1.42
VPS50-220ENST00000544910 KLHL14Q9P2G3 628 aa6.2□□□□□ -1.42
VPS50-220ENST00000544910 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.2□□□□□ -1.42
VPS50-220ENST00000544910 CTNND1O60716 968 aaKnown RBP6.2□□□□□ -1.42
VPS50-220ENST00000544910 SMIM24O75264 130 aa6.2□□□□□ -1.42
VPS50-220ENST00000544910 NPEPPSP55786 919 aa6.2□□□□□ -1.42
VPS50-220ENST00000544910 SF3A3Q12874 501 aaKnown RBP eCLIP6.2□□□□□ -1.42
VPS50-220ENST00000544910 KRT81Q14533 505 aa6.2□□□□□ -1.42
VPS50-220ENST00000544910 WDR59Q6PJI9 974 aa6.2□□□□□ -1.42
VPS50-220ENST00000544910 ZBTB33Q86T24 672 aa6.2□□□□□ -1.42
VPS50-220ENST00000544910 SRLQ86TD4 932 aa6.2□□□□□ -1.42
VPS50-220ENST00000544910 CNKSR2Q8WXI2 1034 aa6.2□□□□□ -1.42
VPS50-220ENST00000544910 RIT2Q99578 217 aa6.2□□□□□ -1.42
VPS50-220ENST00000544910 FAM213AQ9BRX8 229 aa6.2□□□□□ -1.42
VPS50-220ENST00000544910 DDX23Q9BUQ8 820 aaKnown RBP6.2□□□□□ -1.42
VPS50-220ENST00000544910 AMACRQ9UHK6 382 aa6.2□□□□□ -1.42
VPS50-220ENST00000544910 ANAPC7Q9UJX3 599 aa6.2□□□□□ -1.42
VPS50-220ENST00000544910 ZNF148Q9UQR1 794 aa6.2□□□□□ -1.42
VPS50-220ENST00000544910 FAM169AQ9Y6X4 670 aa6.2□□□□□ -1.42
VPS50-220ENST00000544910 A0A0A6YYK5 440 aaPredicted RBP6.2□□□□□ -1.42
VPS50-220ENST00000544910 DDTLA6NHG4 134 aaPredicted RBP6.2□□□□□ -1.42
VPS50-220ENST00000544910 SGK1O00141 431 aa6.2□□□□□ -1.42
VPS50-220ENST00000544910 DAPK3O43293 454 aa6.2□□□□□ -1.42
VPS50-220ENST00000544910 CAV1Q03135 178 aa6.2□□□□□ -1.42
VPS50-220ENST00000544910 ITIH3Q06033 890 aa6.2□□□□□ -1.42
VPS50-220ENST00000544910 RASA3Q14644 834 aa6.2□□□□□ -1.42
VPS50-220ENST00000544910 SURF1Q15526 300 aa6.2□□□□□ -1.42
VPS50-220ENST00000544910 LRRC23Q53EV4 343 aaPredicted RBP6.2□□□□□ -1.42
VPS50-220ENST00000544910 MAP3K21Q5TCX8 1036 aa6.2□□□□□ -1.42
VPS50-220ENST00000544910 SNRNP48Q6IEG0 339 aaKnown RBP6.2□□□□□ -1.42
VPS50-220ENST00000544910 ZNF746Q6NUN9 644 aaPredicted RBP6.2□□□□□ -1.42
VPS50-220ENST00000544910 DNAJC24Q6P3W2 148 aa6.2□□□□□ -1.42
VPS50-220ENST00000544910 TADA2BQ86TJ2 420 aa6.2□□□□□ -1.42
VPS50-220ENST00000544910 RFX6Q8HWS3 928 aa6.2□□□□□ -1.42
VPS50-220ENST00000544910 TRIM59Q8IWR1 403 aa6.2□□□□□ -1.42
VPS50-220ENST00000544910 RIN2Q8WYP3 895 aaPredicted RBP6.2□□□□□ -1.42
VPS50-220ENST00000544910 CAVIN3Q969G5 261 aa6.2□□□□□ -1.42
VPS50-220ENST00000544910 DDX27Q96GQ7 796 aaKnown RBP6.2□□□□□ -1.42
VPS50-220ENST00000544910 EPN3Q9H201 632 aa6.2□□□□□ -1.42
VPS50-220ENST00000544910 RPAP3Q9H6T3 665 aaPredicted RBP6.2□□□□□ -1.42
VPS50-220ENST00000544910 GABBR1Q9UBS5 961 aa6.2□□□□□ -1.42
VPS50-220ENST00000544910 MAP2K7O14733 419 aa6.2□□□□□ -1.42
VPS50-220ENST00000544910 MED7O43513 233 aa6.2□□□□□ -1.42
VPS50-220ENST00000544910 HOXA10P31260 410 aaPredicted RBP6.2□□□□□ -1.42
VPS50-220ENST00000544910 SLCO1A2P46721 670 aa6.2□□□□□ -1.42
VPS50-220ENST00000544910 MAGOHP61326 146 aaKnown RBP6.2□□□□□ -1.42
VPS50-220ENST00000544910 TMED2Q15363 201 aa6.2□□□□□ -1.42
VPS50-220ENST00000544910 MAP7D1Q3KQU3 841 aa6.2□□□□□ -1.42
VPS50-220ENST00000544910 ARHGEF2Q92974 986 aaKnown RBP6.2□□□□□ -1.42
VPS50-220ENST00000544910 KCNMB3Q9NPA1 279 aa6.2□□□□□ -1.42
VPS50-220ENST00000544910 ZNF302Q9NR11 478 aa6.2□□□□□ -1.42
VPS50-220ENST00000544910 RNF146Q9NTX7 359 aa6.2□□□□□ -1.42
VPS50-220ENST00000544910 ITGB4P16144 1822 aa6.2□□□□□ -1.42
VPS50-220ENST00000544910 TOGARAM1Q9Y4F4 1720 aa6.19□□□□□ -1.42
VPS50-220ENST00000544910 CES2O00748 559 aa6.19□□□□□ -1.42
VPS50-220ENST00000544910 TTI1O43156 1089 aa6.19□□□□□ -1.42
VPS50-220ENST00000544910 CYP26A1O43174 497 aa6.19□□□□□ -1.42
VPS50-220ENST00000544910 STK10O94804 968 aaKnown RBP6.19□□□□□ -1.42
VPS50-220ENST00000544910 FDX1P10109 184 aa6.19□□□□□ -1.42
VPS50-220ENST00000544910 CARSP49589 748 aaKnown RBP6.19□□□□□ -1.42
VPS50-220ENST00000544910 IL9RQ01113 521 aa6.19□□□□□ -1.42
VPS50-220ENST00000544910 NPY5RQ15761 445 aa6.19□□□□□ -1.42
VPS50-220ENST00000544910 AGBL2Q5U5Z8 902 aa6.19□□□□□ -1.42
VPS50-220ENST00000544910 CCDC137Q6PK04 289 aaKnown RBP6.19□□□□□ -1.42
VPS50-220ENST00000544910 KCNK18Q7Z418 384 aa6.19□□□□□ -1.42
VPS50-220ENST00000544910 COL23A1Q86Y22 540 aaPredicted RBP6.19□□□□□ -1.42
VPS50-220ENST00000544910 NSUN6Q8TEA1 469 aaKnown RBP6.19□□□□□ -1.42
VPS50-220ENST00000544910 LPAR1Q92633 364 aa6.19□□□□□ -1.42
VPS50-220ENST00000544910 TRIM51Q9BSJ1 452 aa6.19□□□□□ -1.42
VPS50-220ENST00000544910 AGPAT3Q9NRZ7 376 aa6.19□□□□□ -1.42
VPS50-220ENST00000544910 AIPL1Q9NZN9 384 aa6.19□□□□□ -1.42
VPS50-220ENST00000544910 CYP3A7-CYP3A51PA0A087WV96 503 aa6.19□□□□□ -1.42
VPS50-220ENST00000544910 A0A087X0T9 212 aa6.19□□□□□ -1.42
VPS50-220ENST00000544910 MMEP08473 750 aa6.19□□□□□ -1.42
VPS50-220ENST00000544910 FAM228BP0C875 321 aa6.19□□□□□ -1.42
VPS50-220ENST00000544910 CYP3A7P24462 503 aa6.19□□□□□ -1.42
VPS50-220ENST00000544910 TM4SF1P30408 202 aa6.19□□□□□ -1.42
VPS50-220ENST00000544910 MDH1P40925 334 aaKnown RBP6.19□□□□□ -1.42
VPS50-220ENST00000544910 APOBEC3HQ6NTF7 200 aaKnown RBP6.19□□□□□ -1.42
VPS50-220ENST00000544910 LRRC31Q6UY01 552 aa6.19□□□□□ -1.42
VPS50-220ENST00000544910 ACTRT1Q8TDG2 376 aa6.19□□□□□ -1.42
VPS50-220ENST00000544910 ZNF384Q8TF68 577 aa6.19□□□□□ -1.42
VPS50-220ENST00000544910 SNF8Q96H20 258 aa6.19□□□□□ -1.42
VPS50-220ENST00000544910 TRAF3IP3Q9Y228 551 aa6.19□□□□□ -1.42
VPS50-220ENST00000544910 NHSL1Q5SYE7 1610 aa6.19□□□□□ -1.42
VPS50-220ENST00000544910 NWD2Q9ULI1 1742 aa6.19□□□□□ -1.42
VPS50-220ENST00000544910 GMNCA6NCL1 334 aa6.19□□□□□ -1.42
VPS50-220ENST00000544910 PFDN1O60925 122 aa6.19□□□□□ -1.42
VPS50-220ENST00000544910 SUN1O94901 812 aa6.19□□□□□ -1.42
VPS50-220ENST00000544910 PEX19P40855 299 aa6.19□□□□□ -1.42
VPS50-220ENST00000544910 GUCY1A3Q02108 690 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms