RNA–Protein interactions for RNA: ENST00000544891.6

NECAP1-207, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 4,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-207ENST00000544891 ZNF212Q9UDV6 495 aa9.61□□□□□ -0.87
NECAP1-207ENST00000544891 SUN2Q9UH99 717 aa9.61□□□□□ -0.87
NECAP1-207ENST00000544891 NEDD4P46934 1319 aa9.61□□□□□ -0.87
NECAP1-207ENST00000544891 DTNBO60941 627 aa9.6□□□□□ -0.87
NECAP1-207ENST00000544891 CD58P19256 250 aa9.6□□□□□ -0.87
NECAP1-207ENST00000544891 DUOXA2Q1HG44 320 aa9.6□□□□□ -0.87
NECAP1-207ENST00000544891 CEP55Q53EZ4 464 aa9.6□□□□□ -0.87
NECAP1-207ENST00000544891 SPATA31A5Q5VU36 1347 aa9.6□□□□□ -0.87
NECAP1-207ENST00000544891 C4orf50Q6ZRC1 276 aa9.6□□□□□ -0.87
NECAP1-207ENST00000544891 SPATA31A7Q8IWB4 1347 aa9.6□□□□□ -0.87
NECAP1-207ENST00000544891 RFFLQ8WZ73 363 aa9.6□□□□□ -0.87
NECAP1-207ENST00000544891 EEF2KMTQ96G04 330 aa9.6□□□□□ -0.87
NECAP1-207ENST00000544891 LMCD1Q9NZU5 365 aa9.6□□□□□ -0.87
NECAP1-207ENST00000544891 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.6□□□□□ -0.87
NECAP1-207ENST00000544891 TARSL2A2RTX5 802 aaKnown RBP9.6□□□□□ -0.87
NECAP1-207ENST00000544891 DENND3A2RUS2 1198 aa9.6□□□□□ -0.87
NECAP1-207ENST00000544891 DGAT1O75907 488 aa9.6□□□□□ -0.87
NECAP1-207ENST00000544891 EXOSC10Q01780 885 aaKnown RBP9.6□□□□□ -0.87
NECAP1-207ENST00000544891 SLC10A5Q5PT55 438 aa9.6□□□□□ -0.87
NECAP1-207ENST00000544891 CYB5R4Q7L1T6 521 aa9.6□□□□□ -0.87
NECAP1-207ENST00000544891 CELF1Q92879 486 aaKnown RBP9.6□□□□□ -0.87
NECAP1-207ENST00000544891 NRBF2Q96F24 287 aa9.6□□□□□ -0.87
NECAP1-207ENST00000544891 FAM84BQ96KN1 310 aaPredicted RBP9.6□□□□□ -0.87
NECAP1-207ENST00000544891 TNIP3Q96KP6 325 aa9.6□□□□□ -0.87
NECAP1-207ENST00000544891 BFARQ9NZS9 450 aa9.6□□□□□ -0.87
NECAP1-207ENST00000544891 UBN2Q6ZU65 1347 aa9.6□□□□□ -0.87
NECAP1-207ENST00000544891 ATP1A3P13637 1013 aa9.6□□□□□ -0.87
NECAP1-207ENST00000544891 PRCPP42785 496 aa9.6□□□□□ -0.87
NECAP1-207ENST00000544891 HDLBPQ00341 1268 aaKnown RBP9.6□□□□□ -0.87
NECAP1-207ENST00000544891 MKRN3Q13064 507 aaKnown RBP9.6□□□□□ -0.87
NECAP1-207ENST00000544891 ART3Q13508 389 aa9.6□□□□□ -0.87
NECAP1-207ENST00000544891 SNX1Q13596 522 aa9.6□□□□□ -0.87
NECAP1-207ENST00000544891 EDRF1Q3B7T1 1238 aa9.6□□□□□ -0.87
NECAP1-207ENST00000544891 KCTD16Q68DU8 428 aa9.6□□□□□ -0.87
NECAP1-207ENST00000544891 THNSL1Q8IYQ7 743 aa9.6□□□□□ -0.87
NECAP1-207ENST00000544891 FBXL13Q8NEE6 735 aa9.6□□□□□ -0.87
NECAP1-207ENST00000544891 DEPDC1BQ8WUY9 529 aa9.6□□□□□ -0.87
NECAP1-207ENST00000544891 ARHGEF1Q92888 912 aaKnown RBP9.6□□□□□ -0.87
NECAP1-207ENST00000544891 WRNIP1Q96S55 665 aa9.6□□□□□ -0.87
NECAP1-207ENST00000544891 TDRD3Q9H7E2 651 aaKnown RBP9.6□□□□□ -0.87
NECAP1-207ENST00000544891 NOVA2Q9UNW9 492 aaKnown RBP9.6□□□□□ -0.87
NECAP1-207ENST00000544891 COPEO14579 308 aa9.6□□□□□ -0.87
NECAP1-207ENST00000544891 EIF3DO15371 548 aaKnown RBP eCLIP9.6□□□□□ -0.87
NECAP1-207ENST00000544891 ESRRAP11474 423 aaPredicted RBP9.6□□□□□ -0.87
NECAP1-207ENST00000544891 CDC27P30260 824 aa9.6□□□□□ -0.87
NECAP1-207ENST00000544891 LIG3P49916 1009 aa9.6□□□□□ -0.87
NECAP1-207ENST00000544891 LAMB3Q13751 1172 aa9.6□□□□□ -0.87
NECAP1-207ENST00000544891 XKR3Q5GH77 459 aa9.6□□□□□ -0.87
NECAP1-207ENST00000544891 RSBN1LQ6PCB5 846 aaPredicted RBP9.6□□□□□ -0.87
NECAP1-207ENST00000544891 RYBPQ8N488 228 aaPredicted RBP9.6□□□□□ -0.87
NECAP1-207ENST00000544891 RDM1Q8NG50 284 aa9.6□□□□□ -0.87
NECAP1-207ENST00000544891 PLEKHA4Q9H4M7 779 aa9.6□□□□□ -0.87
NECAP1-207ENST00000544891 NHSQ6T4R5 1651 aa9.6□□□□□ -0.87
NECAP1-207ENST00000544891 SPATA31A6Q5VVP1 1343 aa9.59□□□□□ -0.87
NECAP1-207ENST00000544891 ITIH6Q6UXX5 1313 aa9.59□□□□□ -0.87
NECAP1-207ENST00000544891 TMEM247A6NEH6 219 aa9.59□□□□□ -0.87
NECAP1-207ENST00000544891 NBPF26B4DH59 902 aa9.59□□□□□ -0.87
NECAP1-207ENST00000544891 MAGEB2O15479 319 aa9.59□□□□□ -0.87
NECAP1-207ENST00000544891 PSMD3O43242 534 aa9.59□□□□□ -0.87
NECAP1-207ENST00000544891 CTIFO43310 598 aaKnown RBP9.59□□□□□ -0.87
NECAP1-207ENST00000544891 C21orf2O43822 256 aa9.59□□□□□ -0.87
NECAP1-207ENST00000544891 FCER1AP12319 257 aa9.59□□□□□ -0.87
NECAP1-207ENST00000544891 C2orf54Q08AI8 447 aa9.59□□□□□ -0.87
NECAP1-207ENST00000544891 PDCD2Q16342 344 aaPredicted RBP9.59□□□□□ -0.87
NECAP1-207ENST00000544891 TXNRD1Q16881 649 aa9.59□□□□□ -0.87
NECAP1-207ENST00000544891 NBPF10Q6P3W6 841 aaKnown RBP9.59□□□□□ -0.87
NECAP1-207ENST00000544891 GPD1LQ8N335 351 aa9.59□□□□□ -0.87
NECAP1-207ENST00000544891 NBPF15Q8N660 670 aa9.59□□□□□ -0.87
NECAP1-207ENST00000544891 PDZD8Q8NEN9 1154 aa9.59□□□□□ -0.87
NECAP1-207ENST00000544891 FAF2Q96CS3 445 aa9.59□□□□□ -0.87
NECAP1-207ENST00000544891 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.59□□□□□ -0.87
NECAP1-207ENST00000544891 MKNK1Q9BUB5 465 aa9.59□□□□□ -0.87
NECAP1-207ENST00000544891 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.59□□□□□ -0.87
NECAP1-207ENST00000544891 EHD2Q9NZN4 543 aa9.59□□□□□ -0.87
NECAP1-207ENST00000544891 UVRAGQ9P2Y5 699 aa9.59□□□□□ -0.87
NECAP1-207ENST00000544891 LIMA1Q9UHB6 759 aaKnown RBP9.59□□□□□ -0.87
NECAP1-207ENST00000544891 HPCAL4Q9UM19 191 aa9.59□□□□□ -0.87
NECAP1-207ENST00000544891 TRIM33Q9UPN9 1127 aa9.59□□□□□ -0.87
NECAP1-207ENST00000544891 P4HA2O15460 535 aa9.59□□□□□ -0.87
NECAP1-207ENST00000544891 CSF1RP07333 972 aa9.59□□□□□ -0.87
NECAP1-207ENST00000544891 CLCN6P51797 869 aa9.59□□□□□ -0.87
NECAP1-207ENST00000544891 GPSM2P81274 684 aa9.59□□□□□ -0.87
NECAP1-207ENST00000544891 SYNE4Q8N205 404 aa9.59□□□□□ -0.87
NECAP1-207ENST00000544891 KAZALD1Q96I82 304 aa9.59□□□□□ -0.87
NECAP1-207ENST00000544891 DDX50Q9BQ39 737 aaKnown RBP9.59□□□□□ -0.87
NECAP1-207ENST00000544891 EIF2AQ9BY44 585 aaKnown RBP9.59□□□□□ -0.87
NECAP1-207ENST00000544891 CAPN11Q9UMQ6 739 aa9.59□□□□□ -0.87
NECAP1-207ENST00000544891 RAD51Q06609 339 aa9.59□□□□□ -0.87
NECAP1-207ENST00000544891 KIAA1755Q5JYT7 1200 aa9.59□□□□□ -0.87
NECAP1-207ENST00000544891 RASIP1Q5U651 963 aa9.59□□□□□ -0.87
NECAP1-207ENST00000544891 TADA2BQ86TJ2 420 aa9.59□□□□□ -0.87
NECAP1-207ENST00000544891 MCUQ8NE86 351 aa9.59□□□□□ -0.87
NECAP1-207ENST00000544891 SH3TC2Q8TF17 1288 aa9.59□□□□□ -0.87
NECAP1-207ENST00000544891 DYDC2Q96IM9 177 aa9.59□□□□□ -0.87
NECAP1-207ENST00000544891 TMEM60Q9H2L4 133 aa9.59□□□□□ -0.87
NECAP1-207ENST00000544891 SMYD2Q9NRG4 433 aa9.59□□□□□ -0.87
NECAP1-207ENST00000544891 KLHL8Q9P2G9 620 aaPredicted RBP9.59□□□□□ -0.87
NECAP1-207ENST00000544891 SCN7AQ01118 1682 aa9.59□□□□□ -0.87
NECAP1-207ENST00000544891 MYH3P11055 1940 aa9.59□□□□□ -0.87
NECAP1-207ENST00000544891 H3BRJ5 948 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms