RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 CLASRPQ8N2M8 674 aaKnown RBP4.77□□□□□ -1.65
SNHG1-220ENST00000544550 TMEM102Q8N9M5 508 aaPredicted RBP4.77□□□□□ -1.65
SNHG1-220ENST00000544550 TDRD5Q8NAT2 981 aaKnown RBP4.77□□□□□ -1.65
SNHG1-220ENST00000544550 KLHL23Q8NBE8 558 aa4.77□□□□□ -1.65
SNHG1-220ENST00000544550 RASGRP4Q8TDF6 673 aa4.77□□□□□ -1.65
SNHG1-220ENST00000544550 NSUN6Q8TEA1 469 aaKnown RBP4.77□□□□□ -1.65
SNHG1-220ENST00000544550 DCAF4Q8WV16 495 aa4.77□□□□□ -1.65
SNHG1-220ENST00000544550 CASP10Q92851 521 aa4.77□□□□□ -1.65
SNHG1-220ENST00000544550 SPACA7Q96KW9 195 aa4.77□□□□□ -1.65
SNHG1-220ENST00000544550 IWS1Q96ST2 819 aa4.77□□□□□ -1.65
SNHG1-220ENST00000544550 RTKNQ9BST9 563 aa4.77□□□□□ -1.65
SNHG1-220ENST00000544550 S1PR5Q9H228 398 aa4.77□□□□□ -1.65
SNHG1-220ENST00000544550 LIN7BQ9HAP6 207 aa4.77□□□□□ -1.65
SNHG1-220ENST00000544550 PAG1Q9NWQ8 432 aa4.77□□□□□ -1.65
SNHG1-220ENST00000544550 PPP4R2Q9NY27 417 aa4.77□□□□□ -1.65
SNHG1-220ENST00000544550 DDX41Q9UJV9 622 aaKnown RBP4.77□□□□□ -1.65
SNHG1-220ENST00000544550 STX8Q9UNK0 236 aa4.77□□□□□ -1.65
SNHG1-220ENST00000544550 PCDHB12Q9Y5F1 795 aa4.77□□□□□ -1.65
SNHG1-220ENST00000544550 MRVI1Q9Y6F6 885 aa4.77□□□□□ -1.65
SNHG1-220ENST00000544550 PTPRSQ13332 1948 aa4.77□□□□□ -1.65
SNHG1-220ENST00000544550 WDR19Q8NEZ3 1342 aa4.76□□□□□ -1.65
SNHG1-220ENST00000544550 TMEM238LA0A1B0GVL6 79 aa4.76□□□□□ -1.65
SNHG1-220ENST00000544550 C2CD4DB7Z1M9 353 aa4.76□□□□□ -1.65
SNHG1-220ENST00000544550 KINO60870 393 aaKnown RBP4.76□□□□□ -1.65
SNHG1-220ENST00000544550 PRDM1O75626 825 aa4.76□□□□□ -1.65
SNHG1-220ENST00000544550 EIF3JO75822 258 aaKnown RBP4.76□□□□□ -1.65
SNHG1-220ENST00000544550 RPLP2P05387 115 aaKnown RBP4.76□□□□□ -1.65
SNHG1-220ENST00000544550 SP100P23497 879 aaPredicted RBP4.76□□□□□ -1.65
SNHG1-220ENST00000544550 DNAJB1P25685 340 aa4.76□□□□□ -1.65
SNHG1-220ENST00000544550 ADH6P28332 368 aa4.76□□□□□ -1.65
SNHG1-220ENST00000544550 GSTT1P30711 240 aa4.76□□□□□ -1.65
SNHG1-220ENST00000544550 HOXC8P31273 242 aa4.76□□□□□ -1.65
SNHG1-220ENST00000544550 MTHFRP42898 656 aa4.76□□□□□ -1.65
SNHG1-220ENST00000544550 TDO2P48775 406 aa4.76□□□□□ -1.65
SNHG1-220ENST00000544550 ST13P50502 369 aaKnown RBP4.76□□□□□ -1.65
SNHG1-220ENST00000544550 ATXN1P54253 815 aaKnown RBP4.76□□□□□ -1.65
SNHG1-220ENST00000544550 SNAP25P60880 206 aa4.76□□□□□ -1.65
SNHG1-220ENST00000544550 FANCCQ00597 558 aa4.76□□□□□ -1.65
SNHG1-220ENST00000544550 TFAP4Q01664 338 aa4.76□□□□□ -1.65
SNHG1-220ENST00000544550 MYO9BQ13459 2157 aa4.76□□□□□ -1.65
SNHG1-220ENST00000544550 SYDE2Q5VT97 1194 aa4.76□□□□□ -1.65
SNHG1-220ENST00000544550 BTNL9Q6UXG8 535 aa4.76□□□□□ -1.65
SNHG1-220ENST00000544550 RSPH3Q86UC2 560 aa4.76□□□□□ -1.65
SNHG1-220ENST00000544550 FCHSD1Q86WN1 690 aa4.76□□□□□ -1.65
SNHG1-220ENST00000544550 STK11IPQ8N1F8 1099 aa4.76□□□□□ -1.65
SNHG1-220ENST00000544550 C3orf58Q8NDZ4 430 aa4.76□□□□□ -1.65
SNHG1-220ENST00000544550 CLEC4DQ8WXI8 215 aa4.76□□□□□ -1.65
SNHG1-220ENST00000544550 NXPE3Q969Y0 559 aa4.76□□□□□ -1.65
SNHG1-220ENST00000544550 STRBPQ96SI9 672 aaKnown RBP4.76□□□□□ -1.65
SNHG1-220ENST00000544550 FTHL17Q9BXU8 183 aa4.76□□□□□ -1.65
SNHG1-220ENST00000544550 NACAP1Q9BZK3 213 aa4.76□□□□□ -1.65
SNHG1-220ENST00000544550 BHLHE41Q9C0J9 482 aaPredicted RBP4.76□□□□□ -1.65
SNHG1-220ENST00000544550 ADAM7Q9H2U9 754 aa4.76□□□□□ -1.65
SNHG1-220ENST00000544550 ABCB6Q9NP58 842 aa4.76□□□□□ -1.65
SNHG1-220ENST00000544550 NGRNQ9NPE2 291 aaKnown RBP4.76□□□□□ -1.65
SNHG1-220ENST00000544550 SH2B1Q9NRF2 756 aaPredicted RBP4.76□□□□□ -1.65
SNHG1-220ENST00000544550 NCDNQ9UBB6 729 aa4.76□□□□□ -1.65
SNHG1-220ENST00000544550 MYO15AQ9UKN7 3530 aa4.76□□□□□ -1.65
SNHG1-220ENST00000544550 FBXL21Q9UKT6 434 aa4.76□□□□□ -1.65
SNHG1-220ENST00000544550 SLC6A14Q9UN76 642 aa4.76□□□□□ -1.65
SNHG1-220ENST00000544550 LZTS1Q9Y250 596 aa4.76□□□□□ -1.65
SNHG1-220ENST00000544550 MRPL42Q9Y6G3 142 aaKnown RBP4.76□□□□□ -1.65
SNHG1-220ENST00000544550 R4GN57 208 aa4.76□□□□□ -1.65
SNHG1-220ENST00000544550 CCDC171Q6TFL3 1326 aa4.75□□□□□ -1.65
SNHG1-220ENST00000544550 RALGAPA2Q2PPJ7 1873 aa4.75□□□□□ -1.65
SNHG1-220ENST00000544550 CFAP54Q96N23 3096 aa4.75□□□□□ -1.65
SNHG1-220ENST00000544550 TSPY2A6NKD2 308 aa4.75□□□□□ -1.65
SNHG1-220ENST00000544550 GSG1L2A8MUP6 293 aa4.75□□□□□ -1.65
SNHG1-220ENST00000544550 ENPP3O14638 875 aa4.75□□□□□ -1.65
SNHG1-220ENST00000544550 PER2O15055 1255 aa4.75□□□□□ -1.65
SNHG1-220ENST00000544550 ANP32CO43423 234 aa4.75□□□□□ -1.65
SNHG1-220ENST00000544550 GHRHP01286 108 aa4.75□□□□□ -1.65
SNHG1-220ENST00000544550 APPP05067 770 aa4.75□□□□□ -1.65
SNHG1-220ENST00000544550 ITGB2P05107 769 aa4.75□□□□□ -1.65
SNHG1-220ENST00000544550 SMIM10L2AP0DMW4 78 aa4.75□□□□□ -1.65
SNHG1-220ENST00000544550 SMIM10L2BP0DMW5 78 aa4.75□□□□□ -1.65
SNHG1-220ENST00000544550 TRIM27P14373 513 aa4.75□□□□□ -1.65
SNHG1-220ENST00000544550 ADH7P40394 386 aa4.75□□□□□ -1.65
SNHG1-220ENST00000544550 ATP11AP98196 1134 aa4.75□□□□□ -1.65
SNHG1-220ENST00000544550 TBC1D8BQ0IIM8 1120 aa4.75□□□□□ -1.65
SNHG1-220ENST00000544550 TDGQ13569 410 aa4.75□□□□□ -1.65
SNHG1-220ENST00000544550 KCNC3Q14003 757 aa4.75□□□□□ -1.65
SNHG1-220ENST00000544550 BMS1Q14692 1282 aaKnown RBP4.75□□□□□ -1.65
SNHG1-220ENST00000544550 NONOQ15233 471 aaKnown RBP eCLIP4.75□□□□□ -1.65
SNHG1-220ENST00000544550 SPOUT1Q5T280 376 aaKnown RBP4.75□□□□□ -1.65
SNHG1-220ENST00000544550 MEI1Q5TIA1 1274 aa4.75□□□□□ -1.65
SNHG1-220ENST00000544550 ARHGEF16Q5VV41 709 aa4.75□□□□□ -1.65
SNHG1-220ENST00000544550 TAF2Q6P1X5 1199 aa4.75□□□□□ -1.65
SNHG1-220ENST00000544550 SYCE2Q6PIF2 218 aa4.75□□□□□ -1.65
SNHG1-220ENST00000544550 LYPD4Q6UWN0 246 aa4.75□□□□□ -1.65
SNHG1-220ENST00000544550 TSHZ1Q6ZSZ6 1077 aa4.75□□□□□ -1.65
SNHG1-220ENST00000544550 FAM35AQ86V20 835 aa4.75□□□□□ -1.65
SNHG1-220ENST00000544550 MCF2L2Q86YR7 1114 aa4.75□□□□□ -1.65
SNHG1-220ENST00000544550 FAM9BQ8IZU0 186 aa4.75□□□□□ -1.65
SNHG1-220ENST00000544550 VN1R2Q8NFZ6 395 aa4.75□□□□□ -1.65
SNHG1-220ENST00000544550 RNF34Q969K3 372 aa4.75□□□□□ -1.65
SNHG1-220ENST00000544550 ACSF2Q96CM8 615 aaPredicted RBP4.75□□□□□ -1.65
SNHG1-220ENST00000544550 KIF1BPQ96EK5 621 aa4.75□□□□□ -1.65
SNHG1-220ENST00000544550 SPATA33Q96N06 139 aa4.75□□□□□ -1.65
SNHG1-220ENST00000544550 HHIPQ96QV1 700 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms