RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 C2orf40Q9H1Z8 148 aa10.47□□□□□ -0.73
YBX3-215ENST00000544504 TMEM206Q9H813 350 aa10.47□□□□□ -0.73
YBX3-215ENST00000544504 SLC39A2Q9NP94 309 aa10.47□□□□□ -0.73
YBX3-215ENST00000544504 KMT5AQ9NQR1 393 aa10.47□□□□□ -0.73
YBX3-215ENST00000544504 XPNPEP1Q9NQW7 623 aa10.47□□□□□ -0.73
YBX3-215ENST00000544504 CGNQ9P2M7 1197 aaKnown RBP10.47□□□□□ -0.73
YBX3-215ENST00000544504 TCF20Q9UGU0 1960 aaKnown RBP10.46□□□□□ -0.73
YBX3-215ENST00000544504 C17orf102A2RUQ5 167 aa10.46□□□□□ -0.73
YBX3-215ENST00000544504 CCDC169A6NNP5 214 aa10.46□□□□□ -0.73
YBX3-215ENST00000544504 SFI1A8K8P3 1242 aa10.46□□□□□ -0.73
YBX3-215ENST00000544504 RSPH10B2B2RC85 870 aa10.46□□□□□ -0.73
YBX3-215ENST00000544504 ZBTB42B2RXF5 422 aa10.46□□□□□ -0.73
YBX3-215ENST00000544504 PPP1R3GB7ZBB8 358 aa10.46□□□□□ -0.73
YBX3-215ENST00000544504 K7ENM7 598 aa10.46□□□□□ -0.73
YBX3-215ENST00000544504 C22orf31O95567 290 aa10.46□□□□□ -0.73
YBX3-215ENST00000544504 CD4P01730 458 aa10.46□□□□□ -0.73
YBX3-215ENST00000544504 RSPH10BP0C881 870 aa10.46□□□□□ -0.73
YBX3-215ENST00000544504 PTGS1P23219 599 aa10.46□□□□□ -0.73
YBX3-215ENST00000544504 CCNE1P24864 410 aa10.46□□□□□ -0.73
YBX3-215ENST00000544504 NCKAP1LP55160 1127 aa10.46□□□□□ -0.73
YBX3-215ENST00000544504 PEX3P56589 373 aa10.46□□□□□ -0.73
YBX3-215ENST00000544504 IGBP1P78318 339 aa10.46□□□□□ -0.73
YBX3-215ENST00000544504 CACNB1Q02641 598 aaPredicted RBP10.46□□□□□ -0.73
YBX3-215ENST00000544504 POU5F1BQ06416 359 aa10.46□□□□□ -0.73
YBX3-215ENST00000544504 BMT2Q1RMZ1 405 aa10.46□□□□□ -0.73
YBX3-215ENST00000544504 KLHL10Q6JEL2 608 aa10.46□□□□□ -0.73
YBX3-215ENST00000544504 EFCAB12Q6NXP0 572 aa10.46□□□□□ -0.73
YBX3-215ENST00000544504 TAF2Q6P1X5 1199 aa10.46□□□□□ -0.73
YBX3-215ENST00000544504 NFRKBQ6P4R8 1299 aa10.46□□□□□ -0.73
YBX3-215ENST00000544504 MTHFD1LQ6UB35 978 aa10.46□□□□□ -0.73
YBX3-215ENST00000544504 C11orf57Q6ZUT1 292 aaPredicted RBP10.46□□□□□ -0.73
YBX3-215ENST00000544504 MAEAQ7L5Y9 396 aa10.46□□□□□ -0.73
YBX3-215ENST00000544504 EPM2AIP1Q7L775 607 aaPredicted RBP10.46□□□□□ -0.73
YBX3-215ENST00000544504 HS2ST1Q7LGA3 356 aa10.46□□□□□ -0.73
YBX3-215ENST00000544504 ZNF720Q7Z2F6 126 aa10.46□□□□□ -0.73
YBX3-215ENST00000544504 SESTD1Q86VW0 696 aa10.46□□□□□ -0.73
YBX3-215ENST00000544504 ZBTB8OSQ8IWT0 167 aa10.46□□□□□ -0.73
YBX3-215ENST00000544504 METTL13Q8N6R0 699 aa10.46□□□□□ -0.73
YBX3-215ENST00000544504 KIAA0895Q8NCT3 520 aa10.46□□□□□ -0.73
YBX3-215ENST00000544504 DEPTORQ8TB45 409 aa10.46□□□□□ -0.73
YBX3-215ENST00000544504 ZNF507Q8TCN5 953 aa10.46□□□□□ -0.73
YBX3-215ENST00000544504 P2RX5Q93086 422 aa10.46□□□□□ -0.73
YBX3-215ENST00000544504 SH2D3AQ9BRG2 576 aa10.46□□□□□ -0.73
YBX3-215ENST00000544504 HIPK3Q9H422 1215 aa10.46□□□□□ -0.73
YBX3-215ENST00000544504 SUGCTQ9HAC7 445 aa10.46□□□□□ -0.73
YBX3-215ENST00000544504 CBX8Q9HC52 389 aa10.46□□□□□ -0.73
YBX3-215ENST00000544504 SUCLA2Q9P2R7 463 aaPredicted RBP10.46□□□□□ -0.73
YBX3-215ENST00000544504 GDAQ9Y2T3 454 aa10.46□□□□□ -0.73
YBX3-215ENST00000544504 PCDHA2Q9Y5H9 948 aa10.46□□□□□ -0.73
YBX3-215ENST00000544504 KAT6AQ92794 2004 aa10.45□□□□□ -0.74
YBX3-215ENST00000544504 MYH11P35749 1972 aa10.45□□□□□ -0.74
YBX3-215ENST00000544504 SMIM35A0A1B0GVV1 85 aa10.45□□□□□ -0.74
YBX3-215ENST00000544504 MBLAC1A4D2B0 266 aaPredicted RBP10.45□□□□□ -0.74
YBX3-215ENST00000544504 MYADML2A6NDP7 307 aa10.45□□□□□ -0.74
YBX3-215ENST00000544504 PDXKO00764 312 aa10.45□□□□□ -0.74
YBX3-215ENST00000544504 MYOGP15173 224 aa10.45□□□□□ -0.74
YBX3-215ENST00000544504 ATP2A2P16615 1042 aaKnown RBP10.45□□□□□ -0.74
YBX3-215ENST00000544504 RPL13P26373 211 aaKnown RBP10.45□□□□□ -0.74
YBX3-215ENST00000544504 NPTX2P47972 431 aa10.45□□□□□ -0.74
YBX3-215ENST00000544504 CHMP4BP1P59074 171 aa10.45□□□□□ -0.74
YBX3-215ENST00000544504 GTF2BQ00403 316 aa10.45□□□□□ -0.74
YBX3-215ENST00000544504 STRN3Q13033 797 aa10.45□□□□□ -0.74
YBX3-215ENST00000544504 SPATA1Q5VX52 437 aa10.45□□□□□ -0.74
YBX3-215ENST00000544504 CENPPQ6IPU0 288 aa10.45□□□□□ -0.74
YBX3-215ENST00000544504 CXCL17Q6UXB2 119 aa10.45□□□□□ -0.74
YBX3-215ENST00000544504 HAUS6Q7Z4H7 955 aa10.45□□□□□ -0.74
YBX3-215ENST00000544504 RSPH3Q86UC2 560 aa10.45□□□□□ -0.74
YBX3-215ENST00000544504 ZNF410Q86VK4 478 aa10.45□□□□□ -0.74
YBX3-215ENST00000544504 FAM114A1Q8IWE2 563 aa10.45□□□□□ -0.74
YBX3-215ENST00000544504 RPUSD2Q8IZ73 545 aaKnown RBP10.45□□□□□ -0.74
YBX3-215ENST00000544504 NME8Q8N427 588 aa10.45□□□□□ -0.74
YBX3-215ENST00000544504 AOPEPQ8N6M6 819 aa10.45□□□□□ -0.74
YBX3-215ENST00000544504 ANKRD20A12PQ8NF67 263 aa10.45□□□□□ -0.74
YBX3-215ENST00000544504 LMBR1Q8WVP7 490 aa10.45□□□□□ -0.74
YBX3-215ENST00000544504 PRPF31Q8WWY3 499 aaKnown RBP10.45□□□□□ -0.74
YBX3-215ENST00000544504 NELFBQ8WX92 580 aa10.45□□□□□ -0.74
YBX3-215ENST00000544504 ANP32BQ92688 251 aaKnown RBP10.45□□□□□ -0.74
YBX3-215ENST00000544504 TMEM143Q96AN5 459 aa10.45□□□□□ -0.74
YBX3-215ENST00000544504 ACCSQ96QU6 501 aa10.45□□□□□ -0.74
YBX3-215ENST00000544504 GPRC5CQ9NQ84 441 aa10.45□□□□□ -0.74
YBX3-215ENST00000544504 TBC1D7Q9P0N9 293 aa10.45□□□□□ -0.74
YBX3-215ENST00000544504 CTNND2Q9UQB3 1225 aa10.45□□□□□ -0.74
YBX3-215ENST00000544504 FSD2A1L4K1 749 aa10.44□□□□□ -0.74
YBX3-215ENST00000544504 LRRIQ4A6NIV6 560 aa10.44□□□□□ -0.74
YBX3-215ENST00000544504 RFXAPO00287 272 aa10.44□□□□□ -0.74
YBX3-215ENST00000544504 CALUO43852 315 aaPredicted RBP10.44□□□□□ -0.74
YBX3-215ENST00000544504 CA3P07451 260 aa10.44□□□□□ -0.74
YBX3-215ENST00000544504 CYP2C9P11712 490 aa10.44□□□□□ -0.74
YBX3-215ENST00000544504 PRKCSHP14314 528 aaPredicted RBP10.44□□□□□ -0.74
YBX3-215ENST00000544504 GLRA2P23416 452 aa10.44□□□□□ -0.74
YBX3-215ENST00000544504 HOXC8P31273 242 aa10.44□□□□□ -0.74
YBX3-215ENST00000544504 PHKA2P46019 1235 aa10.44□□□□□ -0.74
YBX3-215ENST00000544504 NHLH1Q02575 133 aa10.44□□□□□ -0.74
YBX3-215ENST00000544504 SPAG1Q07617 926 aa10.44□□□□□ -0.74
YBX3-215ENST00000544504 LAMTOR4Q0VGL1 99 aa10.44□□□□□ -0.74
YBX3-215ENST00000544504 MYBPC2Q14324 1141 aa10.44□□□□□ -0.74
YBX3-215ENST00000544504 IQCB1Q15051 598 aa10.44□□□□□ -0.74
YBX3-215ENST00000544504 PCBP1Q15365 356 aaKnown RBP eCLIP10.44□□□□□ -0.74
YBX3-215ENST00000544504 KNOP1Q1ED39 458 aaKnown RBP10.44□□□□□ -0.74
YBX3-215ENST00000544504 EDRF1Q3B7T1 1238 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms