RNA–Protein interactions for RNA: ENST00000544491.2

BPTF-207, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 3

Gene BPTF, Length 409 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-207ENST00000544491 MSL3Q8N5Y2 521 aaKnown RBP4.41□□□□□ -1.7
BPTF-207ENST00000544491 GLB1L3Q8NCI6 653 aaPredicted RBP4.41□□□□□ -1.7
BPTF-207ENST00000544491 RBM8AQ9Y5S9 174 aaKnown RBP4.41□□□□□ -1.7
BPTF-207ENST00000544491 PATE3B3GLJ2 98 aa4.4□□□□□ -1.71
BPTF-207ENST00000544491 ALDH1A2O94788 518 aa4.4□□□□□ -1.71
BPTF-207ENST00000544491 LTA4HP09960 611 aaKnown RBP4.4□□□□□ -1.71
BPTF-207ENST00000544491 OSMP13725 252 aa4.4□□□□□ -1.71
BPTF-207ENST00000544491 CTSSP25774 331 aa4.4□□□□□ -1.71
BPTF-207ENST00000544491 NEK2P51955 445 aa4.4□□□□□ -1.71
BPTF-207ENST00000544491 CDK17Q00537 523 aa4.4□□□□□ -1.71
BPTF-207ENST00000544491 PPP3CAQ08209 521 aa4.4□□□□□ -1.71
BPTF-207ENST00000544491 RIN1Q13671 783 aa4.4□□□□□ -1.71
BPTF-207ENST00000544491 PCBP2Q15366 365 aaKnown RBP eCLIP4.4□□□□□ -1.71
BPTF-207ENST00000544491 PLEKHG6Q3KR16 790 aa4.4□□□□□ -1.71
BPTF-207ENST00000544491 LCE4AQ5TA78 99 aa4.4□□□□□ -1.71
BPTF-207ENST00000544491 PGM2L1Q6PCE3 622 aa4.4□□□□□ -1.71
BPTF-207ENST00000544491 LILRA3Q8N6C8 439 aaPredicted RBP4.4□□□□□ -1.71
BPTF-207ENST00000544491 ANKRD53Q8N9V6 530 aa4.4□□□□□ -1.71
BPTF-207ENST00000544491 SNX33Q8WV41 574 aa4.4□□□□□ -1.71
BPTF-207ENST00000544491 JADE3Q92613 823 aa4.4□□□□□ -1.71
BPTF-207ENST00000544491 HOXB13Q92826 284 aaPredicted RBP4.4□□□□□ -1.71
BPTF-207ENST00000544491 FATE1Q969F0 183 aa4.4□□□□□ -1.71
BPTF-207ENST00000544491 CHMP4CQ96CF2 233 aa4.4□□□□□ -1.71
BPTF-207ENST00000544491 LRRC37BQ96QE4 947 aa4.4□□□□□ -1.71
BPTF-207ENST00000544491 UIMC1Q96RL1 719 aa4.4□□□□□ -1.71
BPTF-207ENST00000544491 SMAD5Q99717 465 aaKnown RBP4.4□□□□□ -1.71
BPTF-207ENST00000544491 ACE2Q9BYF1 805 aaPredicted RBP4.4□□□□□ -1.71
BPTF-207ENST00000544491 KRTAP9-9Q9BYP9 154 aa4.4□□□□□ -1.71
BPTF-207ENST00000544491 KRTAP9-4Q9BYQ2 154 aa4.4□□□□□ -1.71
BPTF-207ENST00000544491 ENKD1Q9H0I2 346 aa4.4□□□□□ -1.71
BPTF-207ENST00000544491 GREM2Q9H772 168 aa4.4□□□□□ -1.71
BPTF-207ENST00000544491 MKS1Q9NXB0 559 aa4.4□□□□□ -1.71
BPTF-207ENST00000544491 SLC30A1Q9Y6M5 507 aa4.4□□□□□ -1.71
BPTF-207ENST00000544491 NPEPPSL1A6NEC2 478 aa4.39□□□□□ -1.71
BPTF-207ENST00000544491 CDC14BO60729 498 aa4.39□□□□□ -1.71
BPTF-207ENST00000544491 ALDH1L1O75891 902 aa4.39□□□□□ -1.71
BPTF-207ENST00000544491 RPS19P39019 145 aaKnown RBP4.39□□□□□ -1.71
BPTF-207ENST00000544491 WASP42768 502 aa4.39□□□□□ -1.71
BPTF-207ENST00000544491 MCAMP43121 646 aa4.39□□□□□ -1.71
BPTF-207ENST00000544491 CTSWP56202 376 aa4.39□□□□□ -1.71
BPTF-207ENST00000544491 MCL1Q07820 350 aa4.39□□□□□ -1.71
BPTF-207ENST00000544491 ACAP1Q15027 740 aa4.39□□□□□ -1.71
BPTF-207ENST00000544491 TTF1Q15361 905 aaPredicted RBP4.39□□□□□ -1.71
BPTF-207ENST00000544491 UBE3CQ15386 1083 aa4.39□□□□□ -1.71
BPTF-207ENST00000544491 PTPN21Q16825 1174 aa4.39□□□□□ -1.71
BPTF-207ENST00000544491 MST1LQ2TV78 715 aa4.39□□□□□ -1.71
BPTF-207ENST00000544491 MUM1L1Q5H9M0 696 aa4.39□□□□□ -1.71
BPTF-207ENST00000544491 TMEM240Q5SV17 173 aa4.39□□□□□ -1.71
BPTF-207ENST00000544491 GJC2Q5T442 439 aaPredicted RBP4.39□□□□□ -1.71
BPTF-207ENST00000544491 TCTN3Q6NUS6 607 aa4.39□□□□□ -1.71
BPTF-207ENST00000544491 ABHD15Q6UXT9 468 aa4.39□□□□□ -1.71
BPTF-207ENST00000544491 LIMS2Q7Z4I7 341 aa4.39□□□□□ -1.71
BPTF-207ENST00000544491 TAX1BP1Q86VP1 789 aa4.39□□□□□ -1.71
BPTF-207ENST00000544491 SHCBP1Q8NEM2 672 aa4.39□□□□□ -1.71
BPTF-207ENST00000544491 TEKT5Q96M29 485 aa4.39□□□□□ -1.71
BPTF-207ENST00000544491 GNRHR2Q96P88 292 aa4.39□□□□□ -1.71
BPTF-207ENST00000544491 PLA2G12BQ9BX93 195 aa4.39□□□□□ -1.71
BPTF-207ENST00000544491 NELFAQ9H3P2 528 aa4.39□□□□□ -1.71
BPTF-207ENST00000544491 TCF7L1Q9HCS4 588 aa4.39□□□□□ -1.71
BPTF-207ENST00000544491 ING3Q9NXR8 418 aa4.39□□□□□ -1.71
BPTF-207ENST00000544491 TUBD1Q9UJT1 453 aa4.39□□□□□ -1.71
BPTF-207ENST00000544491 ZNF536O15090 1300 aa4.39□□□□□ -1.71
BPTF-207ENST00000544491 KLHL33A6NCF5 533 aa4.38□□□□□ -1.71
BPTF-207ENST00000544491 NRP1O14786 923 aa4.38□□□□□ -1.71
BPTF-207ENST00000544491 FOXS1O43638 330 aa4.38□□□□□ -1.71
BPTF-207ENST00000544491 RAD17O75943 681 aa4.38□□□□□ -1.71
BPTF-207ENST00000544491 ZRANB2O95218 330 aaKnown RBP eCLIP4.38□□□□□ -1.71
BPTF-207ENST00000544491 C5AR1P21730 350 aa4.38□□□□□ -1.71
BPTF-207ENST00000544491 CCT2P78371 535 aaKnown RBP4.38□□□□□ -1.71
BPTF-207ENST00000544491 MGAT2Q10469 447 aa4.38□□□□□ -1.71
BPTF-207ENST00000544491 ODF1Q14990 250 aa4.38□□□□□ -1.71
BPTF-207ENST00000544491 GLB1LQ6UWU2 654 aa4.38□□□□□ -1.71
BPTF-207ENST00000544491 CIR1Q86X95 450 aaPredicted RBP4.38□□□□□ -1.71
BPTF-207ENST00000544491 CMTM4Q8IZR5 234 aa4.38□□□□□ -1.71
BPTF-207ENST00000544491 TTC9BQ8N6N2 239 aa4.38□□□□□ -1.71
BPTF-207ENST00000544491 GPR156Q8NFN8 814 aa4.38□□□□□ -1.71
BPTF-207ENST00000544491 RPL10LQ96L21 214 aaKnown RBP4.38□□□□□ -1.71
BPTF-207ENST00000544491 BDH2Q9BUT1 245 aa4.38□□□□□ -1.71
BPTF-207ENST00000544491 CD248Q9HCU0 757 aa4.38□□□□□ -1.71
BPTF-207ENST00000544491 IL23AQ9NPF7 189 aa4.38□□□□□ -1.71
BPTF-207ENST00000544491 RBM12Q9NTZ6 932 aaKnown RBP4.38□□□□□ -1.71
BPTF-207ENST00000544491 TRPS1Q9UHF7 1281 aa4.38□□□□□ -1.71
BPTF-207ENST00000544491 THRAP3Q9Y2W1 955 aaKnown RBP4.38□□□□□ -1.71
BPTF-207ENST00000544491 RPTORQ8N122 1335 aa4.38□□□□□ -1.71
BPTF-207ENST00000544491 FOXD2O60548 495 aaPredicted RBP4.37□□□□□ -1.71
BPTF-207ENST00000544491 PHF2O75151 1096 aa4.37□□□□□ -1.71
BPTF-207ENST00000544491 NDUFS2O75306 463 aa4.37□□□□□ -1.71
BPTF-207ENST00000544491 ABLIM3O94929 683 aa4.37□□□□□ -1.71
BPTF-207ENST00000544491 RECQLP46063 649 aaPredicted RBP4.37□□□□□ -1.71
BPTF-207ENST00000544491 Q6ZVL8 140 aa4.37□□□□□ -1.71
BPTF-207ENST00000544491 ZBTB46Q86UZ6 589 aa4.37□□□□□ -1.71
BPTF-207ENST00000544491 FUKQ8N0W3 1084 aa4.37□□□□□ -1.71
BPTF-207ENST00000544491 ZNF480Q8WV37 535 aa4.37□□□□□ -1.71
BPTF-207ENST00000544491 RIN2Q8WYP3 895 aaPredicted RBP4.37□□□□□ -1.71
BPTF-207ENST00000544491 WWC2-AS2Q96NR7 200 aa4.37□□□□□ -1.71
BPTF-207ENST00000544491 SAMD11Q96NU1 681 aa4.37□□□□□ -1.71
BPTF-207ENST00000544491 SLC2A13Q96QE2 648 aa4.37□□□□□ -1.71
BPTF-207ENST00000544491 CEP89Q96ST8 783 aa4.37□□□□□ -1.71
BPTF-207ENST00000544491 PCGF6Q9BYE7 350 aa4.37□□□□□ -1.71
BPTF-207ENST00000544491 C12orf65Q9H3J6 166 aaKnown RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms