RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 RGS17Q9UGC6 210 aaPredicted RBP17.08■□□□□ 0.32
SNRNP70-203ENST00000544278 TCRBV7S2A1N4TA0A589 114 aa17.08■□□□□ 0.32
SNRNP70-203ENST00000544278 NPM3O75607 178 aaKnown RBP17.08■□□□□ 0.32
SNRNP70-203ENST00000544278 C1orf220Q5T0J3 134 aa17.08■□□□□ 0.32
SNRNP70-203ENST00000544278 NT5DC3Q86UY8 548 aa17.08■□□□□ 0.32
SNRNP70-203ENST00000544278 TMEM130Q8N3G9 435 aa17.08■□□□□ 0.32
SNRNP70-203ENST00000544278 TATDN2Q93075 761 aa17.08■□□□□ 0.32
SNRNP70-203ENST00000544278 PTPN22Q9Y2R2 807 aa17.08■□□□□ 0.32
SNRNP70-203ENST00000544278 BRCA2P51587 3418 aa17.07■□□□□ 0.32
SNRNP70-203ENST00000544278 DENND3A2RUS2 1198 aa17.07■□□□□ 0.32
SNRNP70-203ENST00000544278 PRLRP16471 622 aa17.07■□□□□ 0.32
SNRNP70-203ENST00000544278 MCM3P25205 808 aa17.07■□□□□ 0.32
SNRNP70-203ENST00000544278 ADSSP30520 456 aa17.07■□□□□ 0.32
SNRNP70-203ENST00000544278 GJC1P36383 396 aa17.07■□□□□ 0.32
SNRNP70-203ENST00000544278 KCNJ1P48048 391 aa17.07■□□□□ 0.32
SNRNP70-203ENST00000544278 DHX9Q08211 1270 aaKnown RBP17.07■□□□□ 0.32
SNRNP70-203ENST00000544278 NNTQ13423 1086 aa17.07■□□□□ 0.32
SNRNP70-203ENST00000544278 ANO5Q75V66 913 aa17.07■□□□□ 0.32
SNRNP70-203ENST00000544278 FAM160B2Q86V87 743 aa17.07■□□□□ 0.32
SNRNP70-203ENST00000544278 CEP170P1Q96L14 293 aa17.07■□□□□ 0.32
SNRNP70-203ENST00000544278 TEPSINQ96N21 525 aa17.07■□□□□ 0.32
SNRNP70-203ENST00000544278 STK33Q9BYT3 514 aa17.07■□□□□ 0.32
SNRNP70-203ENST00000544278 R3HDMLQ9H3Y0 253 aa17.07■□□□□ 0.32
SNRNP70-203ENST00000544278 DNAJC17Q9NVM6 304 aaKnown RBP17.07■□□□□ 0.32
SNRNP70-203ENST00000544278 ZNF862O60290 1169 aa17.07■□□□□ 0.32
SNRNP70-203ENST00000544278 MMEP08473 750 aa17.07■□□□□ 0.32
SNRNP70-203ENST00000544278 FERP16591 822 aa17.07■□□□□ 0.32
SNRNP70-203ENST00000544278 MTERF2Q49AM1 385 aa17.07■□□□□ 0.32
SNRNP70-203ENST00000544278 SPOPLQ6IQ16 392 aa17.07■□□□□ 0.32
SNRNP70-203ENST00000544278 TAS1R2Q8TE23 839 aa17.07■□□□□ 0.32
SNRNP70-203ENST00000544278 BICD1Q96G01 975 aa17.07■□□□□ 0.32
SNRNP70-203ENST00000544278 MYCBPQ99417 103 aaPredicted RBP17.07■□□□□ 0.32
SNRNP70-203ENST00000544278 TMEM117Q9H0C3 514 aa17.07■□□□□ 0.32
SNRNP70-203ENST00000544278 GEMIN8Q9NWZ8 242 aaKnown RBP17.07■□□□□ 0.32
SNRNP70-203ENST00000544278 PLAAQ9Y263 795 aa17.07■□□□□ 0.32
SNRNP70-203ENST00000544278 SLC16A3O15427 465 aaKnown RBP17.06■□□□□ 0.32
SNRNP70-203ENST00000544278 KRT5P13647 590 aa17.06■□□□□ 0.32
SNRNP70-203ENST00000544278 PDCD2LQ9BRP1 358 aa17.06■□□□□ 0.32
SNRNP70-203ENST00000544278 EHMT1Q9H9B1 1298 aa17.06■□□□□ 0.32
SNRNP70-203ENST00000544278 ADGRA3Q8IWK6 1321 aa17.06■□□□□ 0.32
SNRNP70-203ENST00000544278 PGRMC1O00264 195 aaKnown RBP17.06■□□□□ 0.32
SNRNP70-203ENST00000544278 MXI1P50539 228 aa17.06■□□□□ 0.32
SNRNP70-203ENST00000544278 SEC24CP53992 1094 aa17.06■□□□□ 0.32
SNRNP70-203ENST00000544278 WNT7BP56706 349 aa17.06■□□□□ 0.32
SNRNP70-203ENST00000544278 TUBB4BP68371 445 aa17.06■□□□□ 0.32
SNRNP70-203ENST00000544278 TMEM143Q96AN5 459 aa17.06■□□□□ 0.32
SNRNP70-203ENST00000544278 ZBTB10Q96DT7 871 aa17.06■□□□□ 0.32
SNRNP70-203ENST00000544278 AMFRQ9UKV5 643 aa17.06■□□□□ 0.32
SNRNP70-203ENST00000544278 DCDC2CA8MYV0 355 aa17.06■□□□□ 0.32
SNRNP70-203ENST00000544278 GJB6O95452 261 aa17.06■□□□□ 0.32
SNRNP70-203ENST00000544278 AARSP49588 968 aaKnown RBP eCLIP17.06■□□□□ 0.321e-6■□□□□ 8.7
SNRNP70-203ENST00000544278 ZNF131P52739 623 aa17.06■□□□□ 0.32
SNRNP70-203ENST00000544278 TNIP1Q15025 636 aa17.06■□□□□ 0.32
SNRNP70-203ENST00000544278 NOP9Q86U38 636 aaKnown RBP17.06■□□□□ 0.32
SNRNP70-203ENST00000544278 PASD1Q8IV76 773 aa17.06■□□□□ 0.32
SNRNP70-203ENST00000544278 SEPT9Q9UHD8 586 aaPredicted RBP17.06■□□□□ 0.32
SNRNP70-203ENST00000544278 EIF3DO15371 548 aaKnown RBP eCLIP17.05■□□□□ 0.32
SNRNP70-203ENST00000544278 ACOT2P49753 483 aa17.05■□□□□ 0.32
SNRNP70-203ENST00000544278 HSD17B4P51659 736 aa17.05■□□□□ 0.32
SNRNP70-203ENST00000544278 TNNC1P63316 161 aa17.05■□□□□ 0.32
SNRNP70-203ENST00000544278 LMO3Q8TAP4 145 aa17.05■□□□□ 0.32
SNRNP70-203ENST00000544278 PIK3R5Q8WYR1 880 aa17.05■□□□□ 0.32
SNRNP70-203ENST00000544278 ZBTB45Q96K62 511 aaPredicted RBP17.05■□□□□ 0.32
SNRNP70-203ENST00000544278 KREMEN1Q96MU8 473 aa17.05■□□□□ 0.32
SNRNP70-203ENST00000544278 FAM213AQ9BRX8 229 aa17.05■□□□□ 0.32
SNRNP70-203ENST00000544278 TAOK3Q9H2K8 898 aa17.05■□□□□ 0.32
SNRNP70-203ENST00000544278 DMAC2Q9NW81 257 aa17.05■□□□□ 0.32
SNRNP70-203ENST00000544278 CNOT7Q9UIV1 285 aaKnown RBP17.05■□□□□ 0.32
SNRNP70-203ENST00000544278 SNX24Q9Y343 169 aa17.05■□□□□ 0.32
SNRNP70-203ENST00000544278 GUCY2CP25092 1073 aa17.05■□□□□ 0.32
SNRNP70-203ENST00000544278 NPTX2P47972 431 aa17.05■□□□□ 0.32
SNRNP70-203ENST00000544278 ANGEL2Q5VTE6 544 aaKnown RBP17.05■□□□□ 0.32
SNRNP70-203ENST00000544278 B3GNT9Q6UX72 402 aa17.05■□□□□ 0.32
SNRNP70-203ENST00000544278 MICALL1Q8N3F8 863 aa17.05■□□□□ 0.32
SNRNP70-203ENST00000544278 XXYLT1Q8NBI6 393 aa17.05■□□□□ 0.32
SNRNP70-203ENST00000544278 POMGNT1Q8WZA1 660 aa17.05■□□□□ 0.32
SNRNP70-203ENST00000544278 SLC38A10Q9HBR0 1119 aa17.05■□□□□ 0.32
SNRNP70-203ENST00000544278 PGAP2Q9UHJ9 254 aa17.05■□□□□ 0.32
SNRNP70-203ENST00000544278 NFKBIEO00221 500 aa17.04■□□□□ 0.32
SNRNP70-203ENST00000544278 TUBBP07437 444 aa17.04■□□□□ 0.32
SNRNP70-203ENST00000544278 PRKCIP41743 596 aa17.04■□□□□ 0.32
SNRNP70-203ENST00000544278 CNTN2Q02246 1040 aa17.04■□□□□ 0.32
SNRNP70-203ENST00000544278 PAK2Q13177 524 aa17.04■□□□□ 0.32
SNRNP70-203ENST00000544278 CDR2LQ86X02 465 aaPredicted RBP17.04■□□□□ 0.32
SNRNP70-203ENST00000544278 AGPAT1Q99943 283 aa17.04■□□□□ 0.32
SNRNP70-203ENST00000544278 ATP8A1Q9Y2Q0 1164 aa17.04■□□□□ 0.32
SNRNP70-203ENST00000544278 TLDC2A0PJX2 215 aa17.04■□□□□ 0.32
SNRNP70-203ENST00000544278 HNRNPDLO14979 420 aaKnown RBP17.04■□□□□ 0.32
SNRNP70-203ENST00000544278 CNGA1P29973 690 aa17.04■□□□□ 0.32
SNRNP70-203ENST00000544278 BCAS4Q8TDM0 211 aa17.04■□□□□ 0.32
SNRNP70-203ENST00000544278 C18orf8Q96DM3 657 aa17.04■□□□□ 0.32
SNRNP70-203ENST00000544278 RNPC3Q96LT9 517 aaKnown RBP17.04■□□□□ 0.32
SNRNP70-203ENST00000544278 NCAPGQ9BPX3 1015 aa17.04■□□□□ 0.32
SNRNP70-203ENST00000544278 GDF3Q9NR23 364 aa17.04■□□□□ 0.32
SNRNP70-203ENST00000544278 FBXL5Q9UKA1 691 aa17.04■□□□□ 0.32
SNRNP70-203ENST00000544278 ALG6Q9Y672 507 aa17.04■□□□□ 0.32
SNRNP70-203ENST00000544278 PPP1R37O75864 691 aa17.04■□□□□ 0.32
SNRNP70-203ENST00000544278 NR3C2P08235 984 aa17.04■□□□□ 0.32
SNRNP70-203ENST00000544278 PLS3P13797 630 aa17.04■□□□□ 0.32
SNRNP70-203ENST00000544278 VPS41P49754 854 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms