RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 CALB1P05937 261 aa11.03□□□□□ -0.64
PCDH9-204ENST00000544246 PLA2G4BP0C869 781 aa11.03□□□□□ -0.64
PCDH9-204ENST00000544246 C4BPBP20851 252 aa11.03□□□□□ -0.64
PCDH9-204ENST00000544246 PSMD7P51665 324 aa11.03□□□□□ -0.64
PCDH9-204ENST00000544246 TRIP4Q15650 581 aaPredicted RBP11.03□□□□□ -0.64
PCDH9-204ENST00000544246 EFHBQ8N7U6 833 aa11.03□□□□□ -0.64
PCDH9-204ENST00000544246 PPM1NQ8N819 430 aa11.03□□□□□ -0.64
PCDH9-204ENST00000544246 FBXO18Q8NFZ0 1043 aa11.03□□□□□ -0.64
PCDH9-204ENST00000544246 RFWD2Q8NHY2 731 aa11.03□□□□□ -0.64
PCDH9-204ENST00000544246 ARL8AQ96BM9 186 aa11.03□□□□□ -0.64
PCDH9-204ENST00000544246 FAM129AQ9BZQ8 928 aa11.03□□□□□ -0.64
PCDH9-204ENST00000544246 AIPL1Q9NZN9 384 aa11.03□□□□□ -0.64
PCDH9-204ENST00000544246 BCAMP50895 628 aa11.02□□□□□ -0.64
PCDH9-204ENST00000544246 PPP2R2AP63151 447 aa11.02□□□□□ -0.64
PCDH9-204ENST00000544246 PRAMEP78395 509 aa11.02□□□□□ -0.64
PCDH9-204ENST00000544246 ICE2Q659A1 982 aa11.02□□□□□ -0.64
PCDH9-204ENST00000544246 CENPPQ6IPU0 288 aa11.02□□□□□ -0.64
PCDH9-204ENST00000544246 SPICE1Q8N0Z3 855 aa11.02□□□□□ -0.64
PCDH9-204ENST00000544246 GPT2Q8TD30 523 aa11.02□□□□□ -0.64
PCDH9-204ENST00000544246 TADA1Q96BN2 335 aa11.02□□□□□ -0.64
PCDH9-204ENST00000544246 ANAPC7Q9UJX3 599 aa11.02□□□□□ -0.64
PCDH9-204ENST00000544246 BLOC1S6Q9UL45 172 aa11.02□□□□□ -0.64
PCDH9-204ENST00000544246 MYO1GB0I1T2 1018 aa11.02□□□□□ -0.65
PCDH9-204ENST00000544246 FAM107AO95990 144 aa11.02□□□□□ -0.65
PCDH9-204ENST00000544246 KRT16P08779 473 aa11.02□□□□□ -0.65
PCDH9-204ENST00000544246 ACCSLQ4AC99 568 aa11.02□□□□□ -0.65
PCDH9-204ENST00000544246 CDKL3Q8IVW4 592 aaPredicted RBP11.02□□□□□ -0.65
PCDH9-204ENST00000544246 VSTM4Q8IW00 320 aa11.02□□□□□ -0.65
PCDH9-204ENST00000544246 BBS7Q8IWZ6 715 aa11.02□□□□□ -0.65
PCDH9-204ENST00000544246 BRIP1Q9BX63 1249 aa11.02□□□□□ -0.65
PCDH9-204ENST00000544246 DYRK4Q9NR20 520 aa11.02□□□□□ -0.65
PCDH9-204ENST00000544246 SEPT3Q9UH03 358 aa11.02□□□□□ -0.65
PCDH9-204ENST00000544246 FBXL5Q9UKA1 691 aa11.02□□□□□ -0.65
PCDH9-204ENST00000544246 RGS12O14924 1447 aa11.02□□□□□ -0.65
PCDH9-204ENST00000544246 CENPAP49450 140 aa11.02□□□□□ -0.65
PCDH9-204ENST00000544246 KRT31Q15323 416 aa11.02□□□□□ -0.65
PCDH9-204ENST00000544246 TRADDQ15628 312 aa11.02□□□□□ -0.65
PCDH9-204ENST00000544246 SYDE2Q5VT97 1194 aa11.02□□□□□ -0.65
PCDH9-204ENST00000544246 RNF135Q8IUD6 432 aa11.02□□□□□ -0.65
PCDH9-204ENST00000544246 MFN1Q8IWA4 741 aa11.02□□□□□ -0.65
PCDH9-204ENST00000544246 MB21D1Q8N884 522 aa11.02□□□□□ -0.65
PCDH9-204ENST00000544246 RNF26Q9BY78 433 aaPredicted RBP11.02□□□□□ -0.65
PCDH9-204ENST00000544246 USE1Q9NZ43 259 aa11.02□□□□□ -0.65
PCDH9-204ENST00000544246 ADAM22Q9P0K1 906 aa11.02□□□□□ -0.65
PCDH9-204ENST00000544246 MKL2Q9ULH7 1088 aa11.02□□□□□ -0.65
PCDH9-204ENST00000544246 GMNCA6NCL1 334 aa11.02□□□□□ -0.65
PCDH9-204ENST00000544246 EIF4E1BA6NMX2 242 aaKnown RBP11.02□□□□□ -0.65
PCDH9-204ENST00000544246 SEMA3EO15041 775 aa11.02□□□□□ -0.65
PCDH9-204ENST00000544246 CCNE1P24864 410 aa11.02□□□□□ -0.65
PCDH9-204ENST00000544246 SERPINB4P48594 390 aa11.02□□□□□ -0.65
PCDH9-204ENST00000544246 ROR1Q01973 937 aa11.02□□□□□ -0.65
PCDH9-204ENST00000544246 CNGA3Q16281 694 aa11.02□□□□□ -0.65
PCDH9-204ENST00000544246 PTPN21Q16825 1174 aa11.02□□□□□ -0.65
PCDH9-204ENST00000544246 AFG1LQ8WV93 481 aa11.02□□□□□ -0.65
PCDH9-204ENST00000544246 MAP3K4Q9Y6R4 1608 aa11.02□□□□□ -0.65
PCDH9-204ENST00000544246 PALMO75781 387 aa11.02□□□□□ -0.65
PCDH9-204ENST00000544246 MAGOHP61326 146 aaKnown RBP11.02□□□□□ -0.65
PCDH9-204ENST00000544246 HEATR6Q6AI08 1181 aaKnown RBP11.02□□□□□ -0.65
PCDH9-204ENST00000544246 CEP95Q96GE4 821 aa11.02□□□□□ -0.65
PCDH9-204ENST00000544246 AGBL1Q96MI9 1066 aa11.02□□□□□ -0.65
PCDH9-204ENST00000544246 KIF1CO43896 1103 aaKnown RBP11.01□□□□□ -0.65
PCDH9-204ENST00000544246 TMED10P49755 219 aaKnown RBP11.01□□□□□ -0.65
PCDH9-204ENST00000544246 ST13P50502 369 aaKnown RBP11.01□□□□□ -0.65
PCDH9-204ENST00000544246 HNRNPH2P55795 449 aaKnown RBP11.01□□□□□ -0.65
PCDH9-204ENST00000544246 SYTL3Q4VX76 610 aa11.01□□□□□ -0.65
PCDH9-204ENST00000544246 CDR2LQ86X02 465 aaPredicted RBP11.01□□□□□ -0.65
PCDH9-204ENST00000544246 ZNF507Q8TCN5 953 aa11.01□□□□□ -0.65
PCDH9-204ENST00000544246 URGCPQ8TCY9 931 aa11.01□□□□□ -0.65
PCDH9-204ENST00000544246 RASGRP4Q8TDF6 673 aa11.01□□□□□ -0.65
PCDH9-204ENST00000544246 GINS4Q9BRT9 223 aa11.01□□□□□ -0.65
PCDH9-204ENST00000544246 HEMGNQ9BXL5 484 aa11.01□□□□□ -0.65
PCDH9-204ENST00000544246 NDST4Q9H3R1 872 aa11.01□□□□□ -0.65
PCDH9-204ENST00000544246 POLR3EQ9NVU0 708 aa11.01□□□□□ -0.65
PCDH9-204ENST00000544246 CNOT8Q9UFF9 292 aaKnown RBP11.01□□□□□ -0.65
PCDH9-204ENST00000544246 KIF24Q5T7B8 1368 aa11.01□□□□□ -0.65
PCDH9-204ENST00000544246 NEURL1BA8MQ27 555 aa11.01□□□□□ -0.65
PCDH9-204ENST00000544246 ZNF189O75820 626 aaPredicted RBP11.01□□□□□ -0.65
PCDH9-204ENST00000544246 HMOX2P30519 316 aa11.01□□□□□ -0.65
PCDH9-204ENST00000544246 LRRC63Q05C16 580 aa11.01□□□□□ -0.65
PCDH9-204ENST00000544246 GTF2H3Q13889 308 aa11.01□□□□□ -0.65
PCDH9-204ENST00000544246 C11orf57Q6ZUT1 292 aaPredicted RBP11.01□□□□□ -0.65
PCDH9-204ENST00000544246 RFX8Q6ZV50 586 aa11.01□□□□□ -0.65
PCDH9-204ENST00000544246 FGD2Q7Z6J4 655 aa11.01□□□□□ -0.65
PCDH9-204ENST00000544246 SCN4BQ8IWT1 228 aa11.01□□□□□ -0.65
PCDH9-204ENST00000544246 DCUN1D1Q96GG9 259 aa11.01□□□□□ -0.65
PCDH9-204ENST00000544246 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.01□□□□□ -0.65
PCDH9-204ENST00000544246 CARMIL3Q8ND23 1372 aa11.01□□□□□ -0.65
PCDH9-204ENST00000544246 UBE4BO95155 1302 aa11.01□□□□□ -0.65
PCDH9-204ENST00000544246 F5H423 210 aaPredicted RBP11.01□□□□□ -0.65
PCDH9-204ENST00000544246 RASSF9O75901 435 aa11.01□□□□□ -0.65
PCDH9-204ENST00000544246 SERPINB1P30740 379 aa11.01□□□□□ -0.65
PCDH9-204ENST00000544246 ALKBH5Q6P6C2 394 aaKnown RBP11.01□□□□□ -0.65
PCDH9-204ENST00000544246 NLRP14Q86W24 1093 aa11.01□□□□□ -0.65
PCDH9-204ENST00000544246 CYGBQ8WWM9 190 aa11.01□□□□□ -0.65
PCDH9-204ENST00000544246 KLHL31Q9H511 634 aa11.01□□□□□ -0.65
PCDH9-204ENST00000544246 ETNK1Q9HBU6 452 aa11.01□□□□□ -0.65
PCDH9-204ENST00000544246 GOLGA8TH3BQL2 631 aa11.01□□□□□ -0.65
PCDH9-204ENST00000544246 ACTN3Q08043 901 aaPredicted RBP11.01□□□□□ -0.65
PCDH9-204ENST00000544246 DPCR1Q3MIW9 517 aa11.01□□□□□ -0.65
PCDH9-204ENST00000544246 MEI1Q5TIA1 1274 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms