RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 DPYDQ12882 1025 aa15□□□□□ -0.01
SP140-213ENST00000543928 DSC3Q14574 896 aa15□□□□□ -0.01
SP140-213ENST00000543928 FAM187BQ17R55 369 aa15□□□□□ -0.01
SP140-213ENST00000543928 TAS1R3Q7RTX0 852 aa15□□□□□ -0.01
SP140-213ENST00000543928 RTN4RL1Q86UN2 441 aaPredicted RBP15□□□□□ -0.01
SP140-213ENST00000543928 SLC17A8Q8NDX2 589 aa15□□□□□ -0.01
SP140-213ENST00000543928 LINC01599Q8WXQ3 324 aa15□□□□□ -0.01
SP140-213ENST00000543928 RNPC3Q96LT9 517 aaKnown RBP15□□□□□ -0.01
SP140-213ENST00000543928 PRIMPOLQ96LW4 560 aa15□□□□□ -0.01
SP140-213ENST00000543928 ADAM2Q99965 735 aa15□□□□□ -0.01
SP140-213ENST00000543928 TSPYL2Q9H2G4 693 aaPredicted RBP15□□□□□ -0.01
SP140-213ENST00000543928 MTIF3Q9H2K0 278 aaKnown RBP15□□□□□ -0.01
SP140-213ENST00000543928 PRO3102Q9H379 93 aa15□□□□□ -0.01
SP140-213ENST00000543928 MRPL44Q9H9J2 332 aaKnown RBP15□□□□□ -0.01
SP140-213ENST00000543928 CHST12Q9NRB3 414 aa15□□□□□ -0.01
SP140-213ENST00000543928 OLFML3Q9NRN5 406 aa15□□□□□ -0.01
SP140-213ENST00000543928 CXXC1Q9P0U4 656 aaPredicted RBP15□□□□□ -0.01
SP140-213ENST00000543928 MICAL3Q7RTP6 2002 aa15□□□□□ -0.01
SP140-213ENST00000543928 CNTNAP2Q9UHC6 1331 aa14.99□□□□□ -0.01
SP140-213ENST00000543928 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.99□□□□□ -0.01
SP140-213ENST00000543928 ACKR2O00590 384 aa14.99□□□□□ -0.01
SP140-213ENST00000543928 ENPP3O14638 875 aa14.99□□□□□ -0.01
SP140-213ENST00000543928 KLRC4O43908 158 aa14.99□□□□□ -0.01
SP140-213ENST00000543928 EDN1P05305 212 aa14.99□□□□□ -0.01
SP140-213ENST00000543928 ARF4P18085 180 aaPredicted RBP14.99□□□□□ -0.01
SP140-213ENST00000543928 HOXA11P31270 313 aaPredicted RBP14.99□□□□□ -0.01
SP140-213ENST00000543928 MCM4P33991 863 aa14.99□□□□□ -0.01
SP140-213ENST00000543928 KCNJ6P48051 423 aa14.99□□□□□ -0.01
SP140-213ENST00000543928 WDR5P61964 334 aaKnown RBP14.99□□□□□ -0.01
SP140-213ENST00000543928 NCBP1Q09161 790 aaKnown RBP14.99□□□□□ -0.01
SP140-213ENST00000543928 STRN3Q13033 797 aa14.99□□□□□ -0.01
SP140-213ENST00000543928 PNOCQ13519 176 aa14.99□□□□□ -0.01
SP140-213ENST00000543928 PRPF4BQ13523 1007 aaKnown RBP14.99□□□□□ -0.01
SP140-213ENST00000543928 FAM26FQ5R3K3 315 aa14.99□□□□□ -0.01
SP140-213ENST00000543928 RASIP1Q5U651 963 aa14.99□□□□□ -0.01
SP140-213ENST00000543928 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.99□□□□□ -0.01
SP140-213ENST00000543928 FAM43BQ6ZT52 329 aaPredicted RBP14.99□□□□□ -0.01
SP140-213ENST00000543928 ZNF720Q7Z2F6 126 aa14.99□□□□□ -0.01
SP140-213ENST00000543928 HPS3Q969F9 1004 aa14.99□□□□□ -0.01
SP140-213ENST00000543928 CPB2Q96IY4 423 aa14.99□□□□□ -0.01
SP140-213ENST00000543928 HOOK1Q9UJC3 728 aaKnown RBP14.99□□□□□ -0.01
SP140-213ENST00000543928 USP20Q9Y2K6 914 aa14.99□□□□□ -0.01
SP140-213ENST00000543928 TTLL13PA6NNM8 815 aa14.98□□□□□ -0.01
SP140-213ENST00000543928 GCNT3O95395 438 aa14.98□□□□□ -0.01
SP140-213ENST00000543928 RPN1P04843 607 aaKnown RBP14.98□□□□□ -0.01
SP140-213ENST00000543928 SCP2P22307 547 aa14.98□□□□□ -0.01
SP140-213ENST00000543928 AXLP30530 894 aa14.98□□□□□ -0.01
SP140-213ENST00000543928 DEFB103AP81534 67 aa14.98□□□□□ -0.01
SP140-213ENST00000543928 GTF2BQ00403 316 aa14.98□□□□□ -0.01
SP140-213ENST00000543928 EHHADHQ08426 723 aa14.98□□□□□ -0.01
SP140-213ENST00000543928 TMEM132AQ24JP5 1023 aa14.98□□□□□ -0.01
SP140-213ENST00000543928 KMT5BQ4FZB7 885 aa14.98□□□□□ -0.01
SP140-213ENST00000543928 ZC2HC1CQ53FD0 456 aaPredicted RBP14.98□□□□□ -0.01
SP140-213ENST00000543928 NT5DC1Q5TFE4 455 aa14.98□□□□□ -0.01
SP140-213ENST00000543928 TWF2Q6IBS0 349 aaKnown RBP14.98□□□□□ -0.01
SP140-213ENST00000543928 NOTUMQ6P988 496 aa14.98□□□□□ -0.01
SP140-213ENST00000543928 ELOA2Q8IYF1 753 aaPredicted RBP14.98□□□□□ -0.01
SP140-213ENST00000543928 TDHQ8IZJ6 230 aa14.98□□□□□ -0.01
SP140-213ENST00000543928 KCNN1Q92952 543 aa14.98□□□□□ -0.01
SP140-213ENST00000543928 FGFBP2Q9BYJ0 223 aa14.98□□□□□ -0.01
SP140-213ENST00000543928 ST6GALNAC4Q9H4F1 302 aa14.98□□□□□ -0.01
SP140-213ENST00000543928 RGS18Q9NS28 235 aa14.98□□□□□ -0.01
SP140-213ENST00000543928 EXOC1Q9NV70 894 aa14.98□□□□□ -0.01
SP140-213ENST00000543928 TBX20Q9UMR3 447 aa14.98□□□□□ -0.01
SP140-213ENST00000543928 COLQQ9Y215 455 aaPredicted RBP14.98□□□□□ -0.01
SP140-213ENST00000543928 SLC4A7Q9Y6M7 1214 aa14.98□□□□□ -0.01
SP140-213ENST00000543928 A0A1B0GUA9 196 aa14.97□□□□□ -0.01
SP140-213ENST00000543928 PPP1R37O75864 691 aa14.97□□□□□ -0.01
SP140-213ENST00000543928 AMHP03971 560 aa14.97□□□□□ -0.01
SP140-213ENST00000543928 MYBP10242 640 aa14.97□□□□□ -0.01
SP140-213ENST00000543928 IBSPP21815 317 aaPredicted RBP14.97□□□□□ -0.01
SP140-213ENST00000543928 ABCD1P33897 745 aa14.97□□□□□ -0.01
SP140-213ENST00000543928 CASP5P51878 434 aa14.97□□□□□ -0.01
SP140-213ENST00000543928 SLC24A5Q71RS6 500 aa14.97□□□□□ -0.01
SP140-213ENST00000543928 CDR2LQ86X02 465 aaPredicted RBP14.97□□□□□ -0.01
SP140-213ENST00000543928 MYOCDQ8IZQ8 938 aa14.97□□□□□ -0.01
SP140-213ENST00000543928 GLIS3Q8NEA6 775 aa14.97□□□□□ -0.01
SP140-213ENST00000543928 GPT2Q8TD30 523 aa14.97□□□□□ -0.01
SP140-213ENST00000543928 ERCC4Q92889 916 aaPredicted RBP14.97□□□□□ -0.01
SP140-213ENST00000543928 CCDC47Q96A33 483 aaKnown RBP14.97□□□□□ -0.01
SP140-213ENST00000543928 STRA6Q9BX79 667 aa14.97□□□□□ -0.01
SP140-213ENST00000543928 MRPL4Q9BYD3 311 aaKnown RBP14.97□□□□□ -0.01
SP140-213ENST00000543928 C1orf112Q9NSG2 853 aa14.97□□□□□ -0.01
SP140-213ENST00000543928 C9IYK1 514 aa14.96□□□□□ -0.01
SP140-213ENST00000543928 SMC2O95347 1197 aa14.96□□□□□ -0.01
SP140-213ENST00000543928 SARSP49591 514 aaKnown RBP14.96□□□□□ -0.01
SP140-213ENST00000543928 RANBP2P49792 3224 aaKnown RBP14.96□□□□□ -0.01
SP140-213ENST00000543928 TTC3P53804 2025 aa14.96□□□□□ -0.01
SP140-213ENST00000543928 ALCAMQ13740 583 aa14.96□□□□□ -0.01
SP140-213ENST00000543928 CAMK4Q16566 473 aa14.96□□□□□ -0.01
SP140-213ENST00000543928 ATF7IP2Q5U623 682 aa14.96□□□□□ -0.01
SP140-213ENST00000543928 STXBP4Q6ZWJ1 553 aa14.96□□□□□ -0.01
SP140-213ENST00000543928 TMCO2Q7Z6W1 182 aaPredicted RBP14.96□□□□□ -0.01
SP140-213ENST00000543928 SMARCE1Q969G3 411 aa14.96□□□□□ -0.01
SP140-213ENST00000543928 HVCN1Q96D96 273 aa14.96□□□□□ -0.01
SP140-213ENST00000543928 CCDC51Q96ER9 411 aa14.96□□□□□ -0.01
SP140-213ENST00000543928 BICD1Q96G01 975 aa14.96□□□□□ -0.01
SP140-213ENST00000543928 SLC9A7Q96T83 725 aa14.96□□□□□ -0.01
SP140-213ENST00000543928 ACO2Q99798 780 aaKnown RBP14.96□□□□□ -0.01
SP140-213ENST00000543928 TARS2Q9BW92 718 aaKnown RBP14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms