RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 KIAA1671Q9BY89 1806 aa16.63■□□□□ 0.25
CD9-210ENST00000543916 GOLGA6L4A6NEF3 574 aa16.63■□□□□ 0.25
CD9-210ENST00000543916 GADD45BO75293 160 aaPredicted RBP16.63■□□□□ 0.25
CD9-210ENST00000543916 AXLP30530 894 aa16.63■□□□□ 0.25
CD9-210ENST00000543916 AFMP43652 599 aa16.63■□□□□ 0.25
CD9-210ENST00000543916 FAM189BP81408 668 aa16.63■□□□□ 0.25
CD9-210ENST00000543916 MAPK6Q16659 721 aa16.63■□□□□ 0.25
CD9-210ENST00000543916 UBXN11Q5T124 520 aa16.63■□□□□ 0.25
CD9-210ENST00000543916 TWF2Q6IBS0 349 aaKnown RBP16.63■□□□□ 0.25
CD9-210ENST00000543916 CDR2LQ86X02 465 aaPredicted RBP16.63■□□□□ 0.25
CD9-210ENST00000543916 SFR1Q86XK3 245 aa16.63■□□□□ 0.25
CD9-210ENST00000543916 ECHDC2Q86YB7 292 aa16.63■□□□□ 0.25
CD9-210ENST00000543916 NPAS4Q8IUM7 802 aa16.63■□□□□ 0.25
CD9-210ENST00000543916 CEP57L1Q8IYX8 460 aa16.63■□□□□ 0.25
CD9-210ENST00000543916 TMEM87AQ8NBN3 555 aa16.63■□□□□ 0.25
CD9-210ENST00000543916 PRIMPOLQ96LW4 560 aa16.63■□□□□ 0.25
CD9-210ENST00000543916 ZBED2Q9BTP6 218 aa16.63■□□□□ 0.25
CD9-210ENST00000543916 TMEM134Q9H6X4 195 aa16.63■□□□□ 0.25
CD9-210ENST00000543916 DACT1Q9NYF0 836 aa16.63■□□□□ 0.25
CD9-210ENST00000543916 PCDHA11Q9Y5I1 949 aa16.63■□□□□ 0.25
CD9-210ENST00000543916 CHD9Q3L8U1 2897 aa16.63■□□□□ 0.25
CD9-210ENST00000543916 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.62■□□□□ 0.25
CD9-210ENST00000543916 A0A0U1RQF3 1178 aa16.62■□□□□ 0.25
CD9-210ENST00000543916 FRMD3A2A2Y4 597 aa16.62■□□□□ 0.25
CD9-210ENST00000543916 LCHNA4D1U4 455 aa16.62■□□□□ 0.25
CD9-210ENST00000543916 K7ERI5 159 aa16.62■□□□□ 0.25
CD9-210ENST00000543916 ACKR2O00590 384 aa16.62■□□□□ 0.25
CD9-210ENST00000543916 TLL1O43897 1013 aa16.62■□□□□ 0.25
CD9-210ENST00000543916 TRAK2O60296 914 aa16.62■□□□□ 0.25
CD9-210ENST00000543916 MAPTP10636 758 aaKnown RBP16.62■□□□□ 0.25
CD9-210ENST00000543916 IDEP14735 1019 aa16.62■□□□□ 0.25
CD9-210ENST00000543916 ATF7P17544 494 aaPredicted RBP16.62■□□□□ 0.25
CD9-210ENST00000543916 DNAJB2P25686 324 aa16.62■□□□□ 0.25
CD9-210ENST00000543916 FXR1P51114 621 aaKnown RBP eCLIP16.62■□□□□ 0.25
CD9-210ENST00000543916 SMTNP53814 917 aa16.62■□□□□ 0.25
CD9-210ENST00000543916 HTRA4P83105 476 aaPredicted RBP16.62■□□□□ 0.25
CD9-210ENST00000543916 AMPD3Q01432 767 aa16.62■□□□□ 0.25
CD9-210ENST00000543916 PRPF4BQ13523 1007 aaKnown RBP16.62■□□□□ 0.25
CD9-210ENST00000543916 CSPP1Q1MSJ5 1256 aa16.62■□□□□ 0.25
CD9-210ENST00000543916 NT5DC1Q5TFE4 455 aa16.62■□□□□ 0.25
CD9-210ENST00000543916 CNNM4Q6P4Q7 775 aa16.62■□□□□ 0.25
CD9-210ENST00000543916 NOTUMQ6P988 496 aa16.62■□□□□ 0.25
CD9-210ENST00000543916 FMR1NBQ8N0W7 255 aaPredicted RBP16.62■□□□□ 0.25
CD9-210ENST00000543916 PAGE5Q96GU1 130 aa16.62■□□□□ 0.25
CD9-210ENST00000543916 C7orf25Q9BPX7 421 aa16.62■□□□□ 0.25
CD9-210ENST00000543916 TRAIPQ9BWF2 469 aa16.62■□□□□ 0.25
CD9-210ENST00000543916 EIF2AQ9BY44 585 aaKnown RBP16.62■□□□□ 0.25
CD9-210ENST00000543916 LRRC27Q9C0I9 530 aa16.62■□□□□ 0.25
CD9-210ENST00000543916 BLZF1Q9H2G9 400 aa16.62■□□□□ 0.25
CD9-210ENST00000543916 RC3H2Q9HBD1 1191 aaKnown RBP16.62■□□□□ 0.25
CD9-210ENST00000543916 USP25Q9UHP3 1055 aa16.62■□□□□ 0.25
CD9-210ENST00000543916 NLRC5Q86WI3 1866 aa16.61■□□□□ 0.25
CD9-210ENST00000543916 K7ENM7 598 aa16.61■□□□□ 0.25
CD9-210ENST00000543916 DGKIO75912 1065 aa16.61■□□□□ 0.25
CD9-210ENST00000543916 ARHGEF15O94989 841 aa16.61■□□□□ 0.25
CD9-210ENST00000543916 ZNF202O95125 648 aa16.61■□□□□ 0.25
CD9-210ENST00000543916 STAG3L1P0CL83 205 aa16.61■□□□□ 0.25
CD9-210ENST00000543916 NMT1P30419 496 aaKnown RBP16.61■□□□□ 0.25
CD9-210ENST00000543916 GATMP50440 423 aa16.61■□□□□ 0.25
CD9-210ENST00000543916 ASIC1P78348 528 aa16.61■□□□□ 0.25
CD9-210ENST00000543916 NCBP1Q09161 790 aaKnown RBP16.61■□□□□ 0.25
CD9-210ENST00000543916 CUL4BQ13620 913 aa16.61■□□□□ 0.25
CD9-210ENST00000543916 RAB30Q15771 203 aa16.61■□□□□ 0.25
CD9-210ENST00000543916 HAUS6Q7Z4H7 955 aa16.61■□□□□ 0.25
CD9-210ENST00000543916 ZNF598Q86UK7 904 aaKnown RBP16.61■□□□□ 0.25
CD9-210ENST00000543916 FAM178BQ8IXR5 827 aa16.61■□□□□ 0.25
CD9-210ENST00000543916 ENGASEQ8NFI3 743 aa16.61■□□□□ 0.25
CD9-210ENST00000543916 CCDC51Q96ER9 411 aa16.61■□□□□ 0.25
CD9-210ENST00000543916 RAD9AQ99638 391 aa16.61■□□□□ 0.25
CD9-210ENST00000543916 NKX2-4Q9H2Z4 354 aa16.61■□□□□ 0.25
CD9-210ENST00000543916 PDZD7Q9H5P4 517 aa16.61■□□□□ 0.25
CD9-210ENST00000543916 ELAC1Q9H777 363 aaKnown RBP16.61■□□□□ 0.25
CD9-210ENST00000543916 FAM105AQ9NUU6 356 aa16.61■□□□□ 0.25
CD9-210ENST00000543916 RNF19AQ9NV58 838 aa16.61■□□□□ 0.25
CD9-210ENST00000543916 PANK4Q9NVE7 773 aa16.61■□□□□ 0.25
CD9-210ENST00000543916 TMEM161AQ9NX61 479 aa16.61■□□□□ 0.25
CD9-210ENST00000543916 KCNG1Q9UIX4 513 aa16.61■□□□□ 0.25
CD9-210ENST00000543916 MSRAQ9UJ68 235 aa16.61■□□□□ 0.25
CD9-210ENST00000543916 LRFN2Q9ULH4 789 aa16.61■□□□□ 0.25
CD9-210ENST00000543916 A0A1B0GUA9 196 aa16.6■□□□□ 0.25
CD9-210ENST00000543916 CA3P07451 260 aa16.6■□□□□ 0.25
CD9-210ENST00000543916 FGFR1P11362 822 aa16.6■□□□□ 0.25
CD9-210ENST00000543916 GAP43P17677 238 aa16.6■□□□□ 0.25
CD9-210ENST00000543916 COASYQ13057 564 aa16.6■□□□□ 0.25
CD9-210ENST00000543916 SNW1Q13573 536 aaKnown RBP16.6■□□□□ 0.25
CD9-210ENST00000543916 HERC4Q5GLZ8 1057 aaPredicted RBP16.6■□□□□ 0.25
CD9-210ENST00000543916 EEF1DP3Q658K8 133 aa16.6■□□□□ 0.25
CD9-210ENST00000543916 SLC27A1Q6PCB7 646 aa16.6■□□□□ 0.25
CD9-210ENST00000543916 KRBA2Q6ZNG9 492 aa16.6■□□□□ 0.25
CD9-210ENST00000543916 CLEC17AQ6ZS10 378 aa16.6■□□□□ 0.25
CD9-210ENST00000543916 CCDC65Q8IXS2 484 aa16.6■□□□□ 0.25
CD9-210ENST00000543916 RNF169Q8NCN4 708 aa16.6■□□□□ 0.25
CD9-210ENST00000543916 KCNN1Q92952 543 aa16.6■□□□□ 0.25
CD9-210ENST00000543916 ZNF689Q96CS4 500 aaPredicted RBP16.6■□□□□ 0.25
CD9-210ENST00000543916 YME1L1Q96TA2 773 aa16.6■□□□□ 0.25
CD9-210ENST00000543916 FGFBP2Q9BYJ0 223 aa16.6■□□□□ 0.25
CD9-210ENST00000543916 TBC1D7Q9P0N9 293 aa16.6■□□□□ 0.25
CD9-210ENST00000543916 SEL1LQ9UBV2 794 aa16.6■□□□□ 0.25
CD9-210ENST00000543916 INSL6Q9Y581 213 aa16.6■□□□□ 0.25
CD9-210ENST00000543916 PCDHB7Q9Y5E2 793 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms